RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 NPNTQ6UXI9 565 aa19.13■□□□□ 0.65
SEMA4B-215ENST00000560089 PLD3Q8IV08 490 aa19.13■□□□□ 0.65
SEMA4B-215ENST00000560089 AQP12AQ8IXF9 295 aa19.13■□□□□ 0.65
SEMA4B-215ENST00000560089 TTLQ8NG68 377 aa19.13■□□□□ 0.65
SEMA4B-215ENST00000560089 SYTL5Q8TDW5 730 aaPredicted RBP19.13■□□□□ 0.65
SEMA4B-215ENST00000560089 CPXM1Q96SM3 734 aa19.13■□□□□ 0.65
SEMA4B-215ENST00000560089 SCN4AP35499 1836 aa19.12■□□□□ 0.65
SEMA4B-215ENST00000560089 CCDC78A2IDD5 438 aa19.12■□□□□ 0.65
SEMA4B-215ENST00000560089 G3V2L1 256 aa19.12■□□□□ 0.65
SEMA4B-215ENST00000560089 SSX4O60224 188 aa19.12■□□□□ 0.65
SEMA4B-215ENST00000560089 ZNF780AO75290 641 aaPredicted RBP19.12■□□□□ 0.65
SEMA4B-215ENST00000560089 CCNE2O96020 404 aa19.12■□□□□ 0.65
SEMA4B-215ENST00000560089 PSKH1P11801 424 aa19.12■□□□□ 0.65
SEMA4B-215ENST00000560089 TPD52P55327 224 aaPredicted RBP19.12■□□□□ 0.65
SEMA4B-215ENST00000560089 CBLBQ13191 982 aa19.12■□□□□ 0.65
SEMA4B-215ENST00000560089 MAPRE2Q15555 327 aa19.12■□□□□ 0.65
SEMA4B-215ENST00000560089 TRMT1LQ7Z2T5 733 aaKnown RBP19.12■□□□□ 0.65
SEMA4B-215ENST00000560089 NLGN4XQ8N0W4 816 aa19.12■□□□□ 0.65
SEMA4B-215ENST00000560089 OR10Z1Q8NGY1 313 aa19.12■□□□□ 0.65
SEMA4B-215ENST00000560089 HSD17B14Q9BPX1 270 aa19.12■□□□□ 0.65
SEMA4B-215ENST00000560089 WDR11Q9BZH6 1224 aa19.12■□□□□ 0.65
SEMA4B-215ENST00000560089 FBXL12Q9NXK8 326 aa19.12■□□□□ 0.65
SEMA4B-215ENST00000560089 EGFL7Q9UHF1 273 aa19.12■□□□□ 0.65
SEMA4B-215ENST00000560089 MRASO14807 208 aa19.12■□□□□ 0.65
SEMA4B-215ENST00000560089 H2AFYO75367 372 aaKnown RBP19.12■□□□□ 0.65
SEMA4B-215ENST00000560089 FCGR1AP12314 374 aa19.12■□□□□ 0.65
SEMA4B-215ENST00000560089 GNA15P30679 374 aa19.12■□□□□ 0.65
SEMA4B-215ENST00000560089 SMAD1Q15797 465 aaKnown RBP19.12■□□□□ 0.65
SEMA4B-215ENST00000560089 ANKRD53Q8N9V6 530 aa19.12■□□□□ 0.65
SEMA4B-215ENST00000560089 SMG8Q8ND04 991 aaKnown RBP19.12■□□□□ 0.65
SEMA4B-215ENST00000560089 REPS2Q8NFH8 660 aa19.12■□□□□ 0.65
SEMA4B-215ENST00000560089 SIGLEC10Q96LC7 697 aa19.12■□□□□ 0.65
SEMA4B-215ENST00000560089 C12orf42Q96LP6 360 aa19.12■□□□□ 0.65
SEMA4B-215ENST00000560089 TEX13BQ9BXU2 312 aa19.12■□□□□ 0.65
SEMA4B-215ENST00000560089 VTI1BQ9UEU0 232 aa19.12■□□□□ 0.65
SEMA4B-215ENST00000560089 ZDHHC2Q9UIJ5 367 aa19.12■□□□□ 0.65
SEMA4B-215ENST00000560089 PNMA8BQ9ULN7 279 aaPredicted RBP19.12■□□□□ 0.65
SEMA4B-215ENST00000560089 AGAP5A6NIR3 686 aa19.11■□□□□ 0.65
SEMA4B-215ENST00000560089 BET1O15155 118 aa19.11■□□□□ 0.65
SEMA4B-215ENST00000560089 LTFP02788 710 aa19.11■□□□□ 0.65
SEMA4B-215ENST00000560089 RBP1P09455 135 aa19.11■□□□□ 0.65
SEMA4B-215ENST00000560089 CCNCP24863 283 aa19.11■□□□□ 0.65
SEMA4B-215ENST00000560089 LRPAP1P30533 357 aa19.11■□□□□ 0.65
SEMA4B-215ENST00000560089 CD68P34810 354 aaPredicted RBP19.11■□□□□ 0.65
SEMA4B-215ENST00000560089 OTUD3Q5T2D3 398 aaPredicted RBP19.11■□□□□ 0.65
SEMA4B-215ENST00000560089 SYCE2Q6PIF2 218 aa19.11■□□□□ 0.65
SEMA4B-215ENST00000560089 SV2AQ7L0J3 742 aa19.11■□□□□ 0.65
SEMA4B-215ENST00000560089 CMC1Q7Z7K0 106 aa19.11■□□□□ 0.65
SEMA4B-215ENST00000560089 P2RY8Q86VZ1 359 aa19.11■□□□□ 0.65
SEMA4B-215ENST00000560089 PLD6Q8N2A8 252 aaKnown RBP19.11■□□□□ 0.65
SEMA4B-215ENST00000560089 KCTD17Q8N5Z5 321 aa19.11■□□□□ 0.65
SEMA4B-215ENST00000560089 MCRS1Q96EZ8 462 aa19.11■□□□□ 0.65
SEMA4B-215ENST00000560089 DPEP3Q9H4B8 488 aa19.11■□□□□ 0.65
SEMA4B-215ENST00000560089 IL7P13232 177 aa19.11■□□□□ 0.65
SEMA4B-215ENST00000560089 ITGB5P18084 799 aa19.11■□□□□ 0.65
SEMA4B-215ENST00000560089 SRP54P61011 504 aaKnown RBP19.11■□□□□ 0.65
SEMA4B-215ENST00000560089 AGKQ53H12 422 aa19.11■□□□□ 0.65
SEMA4B-215ENST00000560089 ERO1BQ86YB8 467 aa19.11■□□□□ 0.65
SEMA4B-215ENST00000560089 C8orf59Q8N0T1 100 aaPredicted RBP19.11■□□□□ 0.65
SEMA4B-215ENST00000560089 TRPV3Q8NET8 790 aa19.11■□□□□ 0.65
SEMA4B-215ENST00000560089 SEPT1Q8WYJ6 367 aa19.11■□□□□ 0.65
SEMA4B-215ENST00000560089 CDKL2Q92772 493 aa19.11■□□□□ 0.65
SEMA4B-215ENST00000560089 TMEM80Q96HE8 168 aa19.11■□□□□ 0.65
SEMA4B-215ENST00000560089 REXO5Q96IC2 774 aaKnown RBP19.11■□□□□ 0.65
SEMA4B-215ENST00000560089 CEP170P1Q96L14 293 aa19.11■□□□□ 0.65
SEMA4B-215ENST00000560089 MYRFLQ96LU7 910 aa19.11■□□□□ 0.65
SEMA4B-215ENST00000560089 FARSBQ9NSD9 589 aaKnown RBP19.11■□□□□ 0.65
SEMA4B-215ENST00000560089 CCDC167Q9P0B6 97 aa19.11■□□□□ 0.65
SEMA4B-215ENST00000560089 CPSF3Q9UKF6 684 aaKnown RBP19.11■□□□□ 0.65
SEMA4B-215ENST00000560089 IPPQ9Y573 584 aa19.11■□□□□ 0.65
SEMA4B-215ENST00000560089 TSPAN4O14817 238 aa19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 ST13P50502 369 aaKnown RBP19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 RLFQ13129 1914 aa19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 ARL13AQ5H913 290 aaPredicted RBP19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 TAF2Q6P1X5 1199 aa19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 RBBP6Q7Z6E9 1792 aaKnown RBP19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 MARVELD3Q96A59 401 aa19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 NODALQ96S42 347 aa19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 ANKHQ9HCJ1 492 aa19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 NMRK2Q9NPI5 230 aa19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 IARS2Q9NSE4 1012 aaKnown RBP19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 INTS10Q9NVR2 710 aaKnown RBP19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 PTGES3LE9PB15 166 aa19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 KCNN4O15554 427 aa19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 SGTAO43765 313 aa19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 KRT19P08727 400 aa19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 KRT7P08729 469 aa19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 GJA5P36382 358 aa19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 GABARAPL2P60520 117 aa19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 PRKAA1Q13131 559 aa19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 DGLUCYQ7Z3D6 616 aa19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 KCTD6Q8NC69 237 aa19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 TOR3AQ9H497 397 aa19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 TLR9Q9NR96 1032 aa19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 PAK1IP1Q9NWT1 392 aaPredicted RBP19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 TAS2R9Q9NYW1 312 aa19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 SLCO1B7G3V0H7 640 aa19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 FASTKQ14296 549 aaKnown RBP19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 PRPSAP1Q14558 356 aa19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 IGSF11Q5DX21 431 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms