RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 TMEM150AQ86TG1 271 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 PGAM4Q8N0Y7 254 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 PELI3Q8N2H9 469 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 RYBPQ8N488 228 aaPredicted RBP11.25□□□□□ -0.61
CLPX-204ENST00000559152 MRPS31Q92665 395 aaKnown RBP11.25□□□□□ -0.61
CLPX-204ENST00000559152 N4BP2L2Q92802 583 aaPredicted RBP11.25□□□□□ -0.61
CLPX-204ENST00000559152 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.25□□□□□ -0.61
CLPX-204ENST00000559152 ACDQ96AP0 544 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 PTERQ96BW5 349 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 VCX3BQ9H321 246 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 MAGEE1Q9HCI5 957 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 S100A14Q9HCY8 104 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 WBP1LQ9NX94 342 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 COPG1Q9Y678 874 aaKnown RBP11.25□□□□□ -0.61
CLPX-204ENST00000559152 SCN5AQ14524 2016 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 CXorf51AA0A1B0GTR3 108 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.25□□□□□ -0.61
CLPX-204ENST00000559152 TMEM233B4DJY2 109 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 GFRA2O00451 464 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 UBDO15205 165 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 CD160O95971 181 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 PDHA1P08559 390 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 PKMP14618 531 aaKnown RBP11.25□□□□□ -0.61
CLPX-204ENST00000559152 FMO4P31512 558 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 MC4RP32245 332 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 ABL2P42684 1182 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 PTGER3P43115 390 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 MNX1P50219 401 aaPredicted RBP11.25□□□□□ -0.61
CLPX-204ENST00000559152 TIAL1Q01085 375 aaKnown RBP eCLIP11.25□□□□□ -0.61
CLPX-204ENST00000559152 UNC50Q53HI1 259 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 ARMC12Q5T9G4 340 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 CERS6Q6ZMG9 384 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 DSELQ8IZU8 1212 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 CPXM2Q8N436 756 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 PTGR2Q8N8N7 351 aaPredicted RBP11.25□□□□□ -0.61
CLPX-204ENST00000559152 ARL14EPQ8N8R7 260 aaPredicted RBP11.25□□□□□ -0.61
CLPX-204ENST00000559152 ZNF333Q96JL9 665 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 TTC1Q99614 292 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 MRPL1Q9BYD6 325 aaKnown RBP11.25□□□□□ -0.61
CLPX-204ENST00000559152 NMRK1Q9NWW6 199 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 UTP6Q9NYH9 597 aaKnown RBP11.25□□□□□ -0.61
CLPX-204ENST00000559152 LHX3Q9UBR4 397 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 RNF112Q9ULX5 631 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 POMPQ9Y244 141 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 OR51B4Q9Y5P0 310 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 CPQQ9Y646 472 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 OAS3Q9Y6K5 1087 aaKnown RBP11.25□□□□□ -0.61
CLPX-204ENST00000559152 LAMA2P24043 3122 aaKnown RBP11.24□□□□□ -0.61
CLPX-204ENST00000559152 SNAP91O60641 907 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 ESR1P03372 595 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 JUNP05412 331 aaKnown RBP11.24□□□□□ -0.61
CLPX-204ENST00000559152 GFAPP14136 432 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 MZF1P28698 734 aaPredicted RBP11.24□□□□□ -0.61
CLPX-204ENST00000559152 KCNC1P48547 511 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 CSNK1DP48730 415 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 ATP4BP51164 291 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 CLNS1AP54105 237 aaKnown RBP11.24□□□□□ -0.61
CLPX-204ENST00000559152 TRAF2Q12933 501 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 PTPRNQ16849 979 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 MPPE1Q53F39 396 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 TXNDC11Q6PKC3 985 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 LINGO4Q6UY18 593 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 BNC2Q6ZN30 1099 aaPredicted RBP11.24□□□□□ -0.61
CLPX-204ENST00000559152 CCDC149Q6ZUS6 474 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 WBP2Q969T9 261 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 NSMCE3Q96MG7 304 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 ATOH8Q96SQ7 321 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 CYP2S1Q96SQ9 504 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 IL21Q9HBE4 155 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 PFDN4Q9NQP4 134 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 POLR3BQ9NW08 1133 aaPredicted RBP11.24□□□□□ -0.61
CLPX-204ENST00000559152 DNMT3BQ9UBC3 853 aaKnown RBP11.24□□□□□ -0.61
CLPX-204ENST00000559152 VPS51Q9UID3 782 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 TRMT6Q9UJA5 497 aaKnown RBP11.24□□□□□ -0.61
CLPX-204ENST00000559152 G3BP2Q9UN86 482 aaKnown RBP11.24□□□□□ -0.61
CLPX-204ENST00000559152 SH3BP1Q9Y3L3 701 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 LIN7AO14910 233 aaPredicted RBP11.24□□□□□ -0.61
CLPX-204ENST00000559152 TEX28O15482 410 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 FZD6O60353 706 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 GREM1O60565 184 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 SKAP2O75563 359 aaPredicted RBP11.24□□□□□ -0.61
CLPX-204ENST00000559152 BAIAP3O94812 1187 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 LRG1P02750 347 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 HMGCLP35914 325 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 CSKP41240 450 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 SLC7A9P82251 487 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 CACNG1Q06432 222 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 FAM117BQ6P1L5 589 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 PAQR3Q6TCH7 311 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 HTR3DQ70Z44 454 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 ELMOD1Q8N336 334 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 TTC30BQ8N4P2 665 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 EFHBQ8N7U6 833 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 PNPLA1Q8N8W4 532 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 SLC26A7Q8TE54 656 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 DDI1Q8WTU0 396 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 KCNJ9Q92806 393 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 GCNAQ96QF7 691 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 YME1L1Q96TA2 773 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 ZNF334Q9HCZ1 680 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms