RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 Q8TCH9 128 aa6.18□□□□□ -1.42
ZEB1-211ENST00000558440 FAXDC2Q96IV6 333 aa6.18□□□□□ -1.42
ZEB1-211ENST00000558440 VCPIP1Q96JH7 1222 aa6.18□□□□□ -1.42
ZEB1-211ENST00000558440 LMF1Q96S06 567 aa6.18□□□□□ -1.42
ZEB1-211ENST00000558440 ABCG4Q9H172 646 aa6.18□□□□□ -1.42
ZEB1-211ENST00000558440 KCTD10Q9H3F6 313 aa6.18□□□□□ -1.42
ZEB1-211ENST00000558440 POLR1BQ9H9Y6 1135 aa6.18□□□□□ -1.42
ZEB1-211ENST00000558440 SMURF1Q9HCE7 757 aa6.18□□□□□ -1.42
ZEB1-211ENST00000558440 TMEM8AQ9HCN3 771 aa6.18□□□□□ -1.42
ZEB1-211ENST00000558440 CNGB3Q9NQW8 809 aa6.18□□□□□ -1.42
ZEB1-211ENST00000558440 CYTH4Q9UIA0 394 aa6.18□□□□□ -1.42
ZEB1-211ENST00000558440 TSPAN16Q9UKR8 245 aa6.18□□□□□ -1.42
ZEB1-211ENST00000558440 INTS6Q9UL03 887 aaKnown RBP6.18□□□□□ -1.42
ZEB1-211ENST00000558440 MTMR6Q9Y217 621 aa6.18□□□□□ -1.42
ZEB1-211ENST00000558440 TCAF1Q9Y4C2 921 aa6.18□□□□□ -1.42
ZEB1-211ENST00000558440 HEMK1Q9Y5R4 338 aaPredicted RBP6.18□□□□□ -1.42
ZEB1-211ENST00000558440 USP9YO00507 2555 aaPredicted RBP6.18□□□□□ -1.42
ZEB1-211ENST00000558440 SCN8AQ9UQD0 1980 aa6.18□□□□□ -1.42
ZEB1-211ENST00000558440 ITIH6Q6UXX5 1313 aa6.18□□□□□ -1.42
ZEB1-211ENST00000558440 DOCK4Q8N1I0 1966 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 CHD5Q8TDI0 1954 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 NOTCH2Q04721 2471 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 A0A1B0GVM2 712 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 ESYT3A0FGR9 886 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 C10orf142B7Z368 130 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 SLC7A4O43246 635 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 PLRG1O43660 514 aaKnown RBP6.17□□□□□ -1.42
ZEB1-211ENST00000558440 KLRC4O43908 158 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 STX10O60499 249 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 RTN2O75298 545 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 LUC7L3O95232 432 aaKnown RBP6.17□□□□□ -1.42
ZEB1-211ENST00000558440 IGLV3-27P01718 113 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 GP1BAP07359 652 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 THEGLP0DJG4 465 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 SETSIPP0DME0 302 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 CKMT1AP12532 417 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 DGKAP23743 735 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 AOAHP28039 575 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 GTF2H1P32780 548 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 PSMC2P35998 433 aaKnown RBP6.17□□□□□ -1.42
ZEB1-211ENST00000558440 ME1P48163 572 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 CSRP3P50461 194 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 MXI1P50539 228 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 DUSP3P51452 185 aaPredicted RBP6.17□□□□□ -1.42
ZEB1-211ENST00000558440 DAOAP59103 153 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 YWHAEP62258 255 aaKnown RBP6.17□□□□□ -1.42
ZEB1-211ENST00000558440 RPS24P62847 133 aaKnown RBP6.17□□□□□ -1.42
ZEB1-211ENST00000558440 NUCB2P80303 420 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 ENPEPQ07075 957 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 POM121L1PQ3SYA9 428 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 C3orf38Q5JPI3 329 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 FAM46CQ5VWP2 391 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 KIAA1614Q5VZ46 1190 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 TCTN3Q6NUS6 607 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 MSANTD2Q6P1R3 559 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 MMS22LQ6ZRQ5 1243 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 TRIM69Q86WT6 500 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 ZC3H7AQ8IWR0 971 aaKnown RBP6.17□□□□□ -1.42
ZEB1-211ENST00000558440 CFAP52Q8N1V2 620 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 SLC25A45Q8N413 288 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 FBXL13Q8NEE6 735 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 UBA3Q8TBC4 463 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 MAPK15Q8TD08 544 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 SNRNP27Q8WVK2 155 aaKnown RBP6.17□□□□□ -1.42
ZEB1-211ENST00000558440 IRGQQ8WZA9 623 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 CCDC47Q96A33 483 aaKnown RBP6.17□□□□□ -1.42
ZEB1-211ENST00000558440 AZIN2Q96A70 460 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 LMLNQ96KR4 655 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 RPL10LQ96L21 214 aaKnown RBP6.17□□□□□ -1.42
ZEB1-211ENST00000558440 PRICKLE1Q96MT3 831 aaPredicted RBP6.17□□□□□ -1.42
ZEB1-211ENST00000558440 SERPINB11Q96P15 392 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 GNRHR2Q96P88 292 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 SPAG5Q96R06 1193 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.17□□□□□ -1.428e-6■■■■□ 22
ZEB1-211ENST00000558440 OSBPL2Q9H1P3 480 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 USP29Q9HBJ7 922 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 ASCL3Q9NQ33 180 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 SLCO3A1Q9UIG8 710 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 TRAF3IP3Q9Y228 551 aa6.17□□□□□ -1.42
ZEB1-211ENST00000558440 NEMP2A6NFY4 417 aa6.16□□□□□ -1.42
ZEB1-211ENST00000558440 PRAMEF25A6NGN4 478 aa6.16□□□□□ -1.42
ZEB1-211ENST00000558440 K7ENP7 123 aa6.16□□□□□ -1.42
ZEB1-211ENST00000558440 MUSKO15146 869 aa6.16□□□□□ -1.42
ZEB1-211ENST00000558440 AKAP8O43823 692 aaKnown RBP6.16□□□□□ -1.42
ZEB1-211ENST00000558440 MOCS2O96007 188 aaPredicted RBP6.16□□□□□ -1.42
ZEB1-211ENST00000558440 APOEP02649 317 aa6.16□□□□□ -1.42
ZEB1-211ENST00000558440 ZNF18P17022 549 aa6.16□□□□□ -1.42
ZEB1-211ENST00000558440 DRD3P35462 400 aa6.16□□□□□ -1.42
ZEB1-211ENST00000558440 ETV4P43268 484 aa6.16□□□□□ -1.42
ZEB1-211ENST00000558440 RGS7P49802 495 aa6.16□□□□□ -1.42
ZEB1-211ENST00000558440 STK19P49842 368 aaPredicted RBP6.16□□□□□ -1.42
ZEB1-211ENST00000558440 IL13RA1P78552 427 aa6.16□□□□□ -1.42
ZEB1-211ENST00000558440 SULT2A1Q06520 285 aa6.16□□□□□ -1.42
ZEB1-211ENST00000558440 CNTN1Q12860 1018 aa6.16□□□□□ -1.42
ZEB1-211ENST00000558440 SLC12A1Q13621 1099 aa6.16□□□□□ -1.42
ZEB1-211ENST00000558440 NFIL3Q16649 462 aa6.16□□□□□ -1.42
ZEB1-211ENST00000558440 ISXQ2M1V0 245 aa6.16□□□□□ -1.42
ZEB1-211ENST00000558440 ACCSLQ4AC99 568 aa6.16□□□□□ -1.42
ZEB1-211ENST00000558440 DCAF6Q58WW2 860 aa6.16□□□□□ -1.42
ZEB1-211ENST00000558440 FSCBQ5H9T9 825 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms