RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 MAGEH1Q9H213 219 aa10.35□□□□□ -0.75
TPM1-212ENST00000558347 TRABDQ9H4I3 376 aa10.35□□□□□ -0.75
TPM1-212ENST00000558347 NOL6Q9H6R4 1146 aaKnown RBP10.35□□□□□ -0.75
TPM1-212ENST00000558347 PREBQ9HCU5 417 aa10.35□□□□□ -0.75
TPM1-212ENST00000558347 TXLNGQ9NUQ3 528 aa10.35□□□□□ -0.75
TPM1-212ENST00000558347 DONSONQ9NYP3 566 aa10.35□□□□□ -0.75
TPM1-212ENST00000558347 SAE1Q9UBE0 346 aaPredicted RBP10.35□□□□□ -0.75
TPM1-212ENST00000558347 CA5BQ9Y2D0 317 aa10.35□□□□□ -0.75
TPM1-212ENST00000558347 PCDHB9Q9Y5E1 797 aa10.35□□□□□ -0.75
TPM1-212ENST00000558347 PCDHGB2Q9Y5G2 931 aa10.35□□□□□ -0.75
TPM1-212ENST00000558347 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.34□□□□□ -0.75
TPM1-212ENST00000558347 A0A1B0GTQ1 180 aa10.34□□□□□ -0.75
TPM1-212ENST00000558347 FLRT2O43155 660 aa10.34□□□□□ -0.75
TPM1-212ENST00000558347 MFSD11O43934 449 aa10.34□□□□□ -0.75
TPM1-212ENST00000558347 RAMP2O60895 175 aa10.34□□□□□ -0.75
TPM1-212ENST00000558347 RNGTTO60942 597 aaKnown RBP10.34□□□□□ -0.75
TPM1-212ENST00000558347 WFS1O76024 890 aa10.34□□□□□ -0.75
TPM1-212ENST00000558347 ZWINTO95229 277 aa10.34□□□□□ -0.75
TPM1-212ENST00000558347 FTH1P19P0C7X4 201 aa10.34□□□□□ -0.75
TPM1-212ENST00000558347 CCNB1P14635 433 aa10.34□□□□□ -0.75
TPM1-212ENST00000558347 GKP32189 559 aa10.34□□□□□ -0.75
TPM1-212ENST00000558347 RECQLP46063 649 aaPredicted RBP10.34□□□□□ -0.75
TPM1-212ENST00000558347 CCT8P50990 548 aa10.34□□□□□ -0.75
TPM1-212ENST00000558347 WDR4P57081 412 aaKnown RBP10.34□□□□□ -0.75
TPM1-212ENST00000558347 POLD3Q15054 466 aaPredicted RBP10.34□□□□□ -0.75
TPM1-212ENST00000558347 SHBQ15464 509 aa10.34□□□□□ -0.75
TPM1-212ENST00000558347 NAPEPLDQ6IQ20 393 aa10.34□□□□□ -0.75
TPM1-212ENST00000558347 ERN2Q76MJ5 926 aaKnown RBP10.34□□□□□ -0.75
TPM1-212ENST00000558347 ASRGL1Q7L266 308 aa10.34□□□□□ -0.75
TPM1-212ENST00000558347 PRPF39Q86UA1 669 aaKnown RBP10.34□□□□□ -0.75
TPM1-212ENST00000558347 CDKL3Q8IVW4 592 aaPredicted RBP10.34□□□□□ -0.75
TPM1-212ENST00000558347 RTL3Q8N8U3 475 aaKnown RBP10.34□□□□□ -0.75
TPM1-212ENST00000558347 PNPLA1Q8N8W4 532 aa10.34□□□□□ -0.75
TPM1-212ENST00000558347 OR6K2Q8NGY2 324 aa10.34□□□□□ -0.75
TPM1-212ENST00000558347 ZNF398Q8TD17 642 aa10.34□□□□□ -0.75
TPM1-212ENST00000558347 RHBDD1Q8TEB9 315 aa10.34□□□□□ -0.75
TPM1-212ENST00000558347 FBF1Q8TES7 1133 aa10.34□□□□□ -0.75
TPM1-212ENST00000558347 RTP4Q96DX8 246 aa10.34□□□□□ -0.75
TPM1-212ENST00000558347 FAM118BQ9BPY3 351 aa10.34□□□□□ -0.75
TPM1-212ENST00000558347 HEPHQ9BQS7 1158 aa10.34□□□□□ -0.75
TPM1-212ENST00000558347 DHRS4Q9BTZ2 278 aa10.34□□□□□ -0.75
TPM1-212ENST00000558347 TMEM121BQ9BXQ6 578 aaPredicted RBP10.34□□□□□ -0.75
TPM1-212ENST00000558347 HDAC8Q9BY41 377 aa10.34□□□□□ -0.75
TPM1-212ENST00000558347 FRMD8Q9BZ67 464 aaPredicted RBP10.34□□□□□ -0.75
TPM1-212ENST00000558347 PITPNM3Q9BZ71 974 aa10.34□□□□□ -0.75
TPM1-212ENST00000558347 KLC2Q9H0B6 622 aa10.34□□□□□ -0.75
TPM1-212ENST00000558347 BRD8Q9H0E9 1235 aa10.34□□□□□ -0.75
TPM1-212ENST00000558347 NOD2Q9HC29 1040 aa10.34□□□□□ -0.75
TPM1-212ENST00000558347 TBK1Q9UHD2 729 aa10.34□□□□□ -0.75
TPM1-212ENST00000558347 KLK13Q9UKR3 277 aa10.34□□□□□ -0.75
TPM1-212ENST00000558347 HEY1Q9Y5J3 304 aa10.34□□□□□ -0.75
TPM1-212ENST00000558347 USH1CQ9Y6N9 552 aa10.34□□□□□ -0.75
TPM1-212ENST00000558347 USP24Q9UPU5 2620 aa10.34□□□□□ -0.75
TPM1-212ENST00000558347 ZZEF1O43149 2961 aa10.34□□□□□ -0.75
TPM1-212ENST00000558347 CABIN1Q9Y6J0 2220 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 CXorf51AA0A1B0GTR3 108 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 A0A1W2PQU0 124 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 C1QTNF9BB2RNN3 333 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 TLR4O00206 839 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 KDELR3O43731 214 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 TYROBPO43914 113 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 PCDHGA12O60330 932 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 SPAG6O75602 509 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 DCTN3O75935 186 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 C1QTNF9P0C862 333 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 ZSCAN5DPP0CG00 497 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 MX2P20592 715 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 FOXN2P32314 431 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 ETFBP38117 255 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 GEMIN4P57678 1058 aaKnown RBP10.33□□□□□ -0.76
TPM1-212ENST00000558347 NXPH1P58417 271 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 GALNT2Q10471 571 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 PDIA2Q13087 525 aaKnown RBP10.33□□□□□ -0.76
TPM1-212ENST00000558347 PDK1Q15118 436 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 SLC45A4Q5BKX6 768 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 AFMIDQ63HM1 303 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 CGB2Q6NT52 195 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 DARS2Q6PI48 645 aaKnown RBP10.33□□□□□ -0.76
TPM1-212ENST00000558347 GLRX5Q86SX6 157 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 SLCO6A1Q86UG4 719 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 GATAD2AQ86YP4 633 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 LRRC49Q8IUZ0 686 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 UMODL1-AS1Q8N2C9 162 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 CHCHD4Q8N4Q1 142 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 NAT8LQ8N9F0 302 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 GLIS1Q8NBF1 620 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 NETO2Q8NC67 525 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 KLK6Q92876 244 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 ISG20Q96AZ6 181 aaKnown RBP10.33□□□□□ -0.76
TPM1-212ENST00000558347 PPP1R16AQ96I34 528 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 QKIQ96PU8 341 aaKnown RBP eCLIP10.33□□□□□ -0.761e-8■■■■■ 42
TPM1-212ENST00000558347 RAB3IPQ96QF0 476 aaPredicted RBP10.33□□□□□ -0.76
TPM1-212ENST00000558347 ELF4Q99607 663 aaPredicted RBP10.33□□□□□ -0.76
TPM1-212ENST00000558347 MYOCQ99972 504 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 ZDHHC6Q9H6R6 413 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 VPS37BQ9H9H4 285 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 USP29Q9HBJ7 922 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 DYRK4Q9NR20 520 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 TOR4AQ9NXH8 423 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 HECAQ9UBI9 543 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms