RNA–Protein interactions for RNA: ENST00000558103.1

CLPX-202, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 5

Gene CLPX, Length 605 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-202ENST00000558103 ZNF699Q32M78 642 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 BEAN1Q3B7T3 259 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 C3orf36Q3SXR2 165 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 PREPLQ4J6C6 727 aaPredicted RBP6.3□□□□□ -1.4
CLPX-202ENST00000558103 HECTD3Q5T447 861 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 SHC4Q6S5L8 630 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 SLC36A4Q6YBV0 504 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 UNC13DQ70J99 1090 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 ZNF627Q7L945 461 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 TMEM25Q86YD3 366 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 MINDY1Q8N5J2 469 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 CEP76Q8TAP6 659 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 JPH3Q8WXH2 748 aaPredicted RBP6.3□□□□□ -1.4
CLPX-202ENST00000558103 SYAP1Q96A49 352 aaPredicted RBP6.3□□□□□ -1.4
CLPX-202ENST00000558103 CCDC127Q96BQ5 260 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 P2RY11Q96G91 374 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 ACOX2Q99424 681 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 SMOQ99835 787 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 GABRG3Q99928 467 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 LRRC27Q9C0I9 530 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 REXO4Q9GZR2 422 aaKnown RBP6.3□□□□□ -1.4
CLPX-202ENST00000558103 ZSCAN16Q9H4T2 348 aaPredicted RBP6.3□□□□□ -1.4
CLPX-202ENST00000558103 UPF2Q9HAU5 1272 aaKnown RBP6.3□□□□□ -1.4
CLPX-202ENST00000558103 FBXO34Q9NWN3 711 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 COMMD8Q9NX08 183 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 HMGXB4Q9UGU5 601 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 CHORDC1Q9UHD1 332 aaPredicted RBP6.3□□□□□ -1.4
CLPX-202ENST00000558103 RUVBL1Q9Y265 456 aaKnown RBP6.3□□□□□ -1.4
CLPX-202ENST00000558103 PCDHB1Q9Y5F3 818 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 COL5A1P20908 1838 aaPredicted RBP6.29□□□□□ -1.4
CLPX-202ENST00000558103 ATP8B3O60423 1300 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 TCRBV7S2A1N4TA0A589 114 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 HHLA1C9JL84 531 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 NEDD8-MDP1E9PL57 170 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 H0Y626 953 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 TAF4O00268 1085 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 TLR5O60602 858 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 TRIM16O95361 564 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 VNN1O95497 513 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 IL33O95760 270 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 CFIP05156 583 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 IRF1P10914 325 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 CD59P13987 128 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 CCDC130P13994 396 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 TYRP14679 529 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 SLC6A2P23975 617 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 CASP1P29466 404 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 CYP2J2P51589 502 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 ATXN3P54252 364 aaPredicted RBP6.29□□□□□ -1.4
CLPX-202ENST00000558103 GFPT1Q06210 699 aaPredicted RBP6.29□□□□□ -1.4
CLPX-202ENST00000558103 SLC14A1Q13336 389 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 TRPC3Q13507 836 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 ZNF667Q5HYK9 610 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 SCARA5Q6ZMJ2 495 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 Q6ZPA2 131 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 CLEC20AQ6ZU45 233 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 TOGARAM2Q6ZUX3 1019 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 RABEPKQ7Z6M1 372 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 NELFCDQ8IXH7 590 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 CRYBG2Q8N1P7 616 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 HDDC3Q8N4P3 179 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 OR56A1Q8NGH5 318 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 PROKR1Q8TCW9 393 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 PARD3BQ8TEW8 1205 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 IPO4Q8TEX9 1081 aaKnown RBP6.29□□□□□ -1.4
CLPX-202ENST00000558103 TMEM174Q8WUU8 243 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 DHX58Q96C10 678 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 ZNF419Q96HQ0 510 aaPredicted RBP6.29□□□□□ -1.4
CLPX-202ENST00000558103 TNIP3Q96KP6 325 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 MRGPRX1Q96LB2 322 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 DMRTA2Q96SC8 542 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 MLST8Q9BVC4 326 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 GTPBP2Q9BX10 602 aaKnown RBP6.29□□□□□ -1.4
CLPX-202ENST00000558103 CDH19Q9H159 772 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 GSTO2Q9H4Y5 243 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 MAGEF1Q9HAY2 307 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 NMUR1Q9HB89 426 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 DNAJC17Q9NVM6 304 aaKnown RBP6.29□□□□□ -1.4
CLPX-202ENST00000558103 KLHL11Q9NVR0 708 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 OSER1Q9NX31 292 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 CGNQ9P2M7 1197 aaKnown RBP6.29□□□□□ -1.4
CLPX-202ENST00000558103 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.29□□□□□ -1.4
CLPX-202ENST00000558103 ANKRD6Q9Y2G4 727 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 MYLKQ15746 1914 aa6.29□□□□□ -1.4
CLPX-202ENST00000558103 IGSF10Q6WRI0 2623 aa6.28□□□□□ -1.4
CLPX-202ENST00000558103 CENPVL1A0A0U1RR11 272 aa6.28□□□□□ -1.4
CLPX-202ENST00000558103 SPTLC2O15270 562 aa6.28□□□□□ -1.4
CLPX-202ENST00000558103 STX6O43752 255 aa6.28□□□□□ -1.4
CLPX-202ENST00000558103 EXOC3O60645 756 aa6.28□□□□□ -1.4
CLPX-202ENST00000558103 PRSS23O95084 383 aa6.28□□□□□ -1.4
CLPX-202ENST00000558103 ZRANB2O95218 330 aaKnown RBP eCLIP6.28□□□□□ -1.4
CLPX-202ENST00000558103 YEATS4O95619 227 aa6.28□□□□□ -1.4
CLPX-202ENST00000558103 TBX18O95935 607 aa6.28□□□□□ -1.4
CLPX-202ENST00000558103 CISD3P0C7P0 127 aa6.28□□□□□ -1.4
CLPX-202ENST00000558103 KRT4P19013 534 aa6.28□□□□□ -1.4
CLPX-202ENST00000558103 GCSHP23434 173 aa6.28□□□□□ -1.4
CLPX-202ENST00000558103 AP3M2P53677 418 aa6.28□□□□□ -1.4
CLPX-202ENST00000558103 INCA1Q0VD86 236 aa6.28□□□□□ -1.4
CLPX-202ENST00000558103 BIRC3Q13489 604 aa6.28□□□□□ -1.4
CLPX-202ENST00000558103 ENPP2Q13822 863 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms