RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 ZDHHC20Q5W0Z9 365 aa21.19■□□□□ 0.98
CASC4-204ENST00000557945 PTAR1Q7Z6K3 402 aaPredicted RBP21.19■□□□□ 0.98
CASC4-204ENST00000557945 PDIK1LQ8N165 341 aa21.19■□□□□ 0.98
CASC4-204ENST00000557945 MPP5Q8N3R9 675 aa21.19■□□□□ 0.98
CASC4-204ENST00000557945 STYXQ8WUJ0 223 aa21.19■□□□□ 0.98
CASC4-204ENST00000557945 SPATA16Q9BXB7 569 aa21.19■□□□□ 0.98
CASC4-204ENST00000557945 CDH19Q9H159 772 aa21.19■□□□□ 0.98
CASC4-204ENST00000557945 CHRAC1Q9NRG0 131 aa21.19■□□□□ 0.98
CASC4-204ENST00000557945 SAMD15Q9P1V8 674 aa21.19■□□□□ 0.98
CASC4-204ENST00000557945 PCDHGA5Q9Y5G8 931 aa21.19■□□□□ 0.98
CASC4-204ENST00000557945 MROH6A6NGR9 719 aa21.18■□□□□ 0.98
CASC4-204ENST00000557945 A6NNZ2 444 aa21.18■□□□□ 0.98
CASC4-204ENST00000557945 PRR5-ARHGAP8B1AHC4 643 aa21.18■□□□□ 0.98
CASC4-204ENST00000557945 K7ESM1 405 aa21.18■□□□□ 0.98
CASC4-204ENST00000557945 CCL22O00626 93 aa21.18■□□□□ 0.98
CASC4-204ENST00000557945 TP73O15350 636 aa21.18■□□□□ 0.98
CASC4-204ENST00000557945 RETP07949 1114 aa21.18■□□□□ 0.98
CASC4-204ENST00000557945 CD38P28907 300 aa21.18■□□□□ 0.98
CASC4-204ENST00000557945 HOXD12P35452 270 aa21.18■□□□□ 0.98
CASC4-204ENST00000557945 SPAM1P38567 509 aa21.18■□□□□ 0.98
CASC4-204ENST00000557945 MPLP40238 635 aa21.18■□□□□ 0.98
CASC4-204ENST00000557945 HADHAP40939 763 aa21.18■□□□□ 0.98
CASC4-204ENST00000557945 GPR1P46091 355 aa21.18■□□□□ 0.98
CASC4-204ENST00000557945 AFF3P51826 1226 aaKnown RBP21.18■□□□□ 0.98
CASC4-204ENST00000557945 ARL4CP56559 192 aa21.18■□□□□ 0.98
CASC4-204ENST00000557945 DCDC1P59894 354 aa21.18■□□□□ 0.98
CASC4-204ENST00000557945 CAV1Q03135 178 aa21.18■□□□□ 0.98
CASC4-204ENST00000557945 DPTQ07507 201 aa21.18■□□□□ 0.98
CASC4-204ENST00000557945 TEAD4Q15561 434 aa21.18■□□□□ 0.98
CASC4-204ENST00000557945 HIF1AQ16665 826 aa21.18■□□□□ 0.98
CASC4-204ENST00000557945 SKIDA1Q1XH10 827 aa21.18■□□□□ 0.98
CASC4-204ENST00000557945 BBS9Q3SYG4 887 aa21.18■□□□□ 0.98
CASC4-204ENST00000557945 TSTD2Q5T7W7 516 aa21.18■□□□□ 0.98
CASC4-204ENST00000557945 ESRP1Q6NXG1 681 aaKnown RBP21.18■□□□□ 0.98
CASC4-204ENST00000557945 PNCKQ6P2M8 343 aa21.18■□□□□ 0.98
CASC4-204ENST00000557945 LAYNQ6UX15 382 aa21.18■□□□□ 0.98
CASC4-204ENST00000557945 FAM151BQ6UXP7 276 aa21.18■□□□□ 0.98
CASC4-204ENST00000557945 NLRP9Q7RTR0 991 aa21.18■□□□□ 0.98
CASC4-204ENST00000557945 PELI3Q8N2H9 469 aa21.18■□□□□ 0.98
CASC4-204ENST00000557945 ART4Q93070 314 aa21.18■□□□□ 0.98
CASC4-204ENST00000557945 BMFQ96LC9 184 aa21.18■□□□□ 0.98
CASC4-204ENST00000557945 PLEKHG4BQ96PX9 1271 aa21.18■□□□□ 0.98
CASC4-204ENST00000557945 FAM114A2Q9NRY5 505 aa21.18■□□□□ 0.98
CASC4-204ENST00000557945 FKBPLQ9UIM3 349 aa21.18■□□□□ 0.98
CASC4-204ENST00000557945 MAD1L1Q9Y6D9 718 aa21.18■□□□□ 0.98
CASC4-204ENST00000557945 CFIP05156 583 aa21.17■□□□□ 0.98
CASC4-204ENST00000557945 TSHRP16473 764 aa21.17■□□□□ 0.98
CASC4-204ENST00000557945 MAGEA3P43357 314 aa21.17■□□□□ 0.98
CASC4-204ENST00000557945 CSNK1EP49674 416 aaKnown RBP21.17■□□□□ 0.98
CASC4-204ENST00000557945 DHX9Q08211 1270 aaKnown RBP21.17■□□□□ 0.98
CASC4-204ENST00000557945 CCDC6Q16204 474 aa21.17■□□□□ 0.98
CASC4-204ENST00000557945 HENMT1Q5T8I9 393 aaKnown RBP21.17■□□□□ 0.98
CASC4-204ENST00000557945 PEAR1Q5VY43 1037 aaPredicted RBP21.17■□□□□ 0.98
CASC4-204ENST00000557945 KYAT3Q6YP21 454 aaKnown RBP21.17■□□□□ 0.98
CASC4-204ENST00000557945 Q6ZSR6 202 aa21.17■□□□□ 0.98
CASC4-204ENST00000557945 RABEPKQ7Z6M1 372 aa21.17■□□□□ 0.98
CASC4-204ENST00000557945 ABI3BPQ7Z7G0 1075 aa21.17■□□□□ 0.98
CASC4-204ENST00000557945 MFSD2AQ8NA29 543 aa21.17■□□□□ 0.98
CASC4-204ENST00000557945 IFT81Q8WYA0 676 aa21.17■□□□□ 0.98
CASC4-204ENST00000557945 SEC14L1Q92503 715 aa21.17■□□□□ 0.98
CASC4-204ENST00000557945 SKA1Q96BD8 255 aa21.17■□□□□ 0.98
CASC4-204ENST00000557945 KLHDC7BQ96G42 594 aa21.17■□□□□ 0.98
CASC4-204ENST00000557945 AGAP2Q99490 1192 aa21.17■□□□□ 0.98
CASC4-204ENST00000557945 IL26Q9NPH9 171 aa21.17■□□□□ 0.98
CASC4-204ENST00000557945 NLE1Q9NVX2 485 aaPredicted RBP21.17■□□□□ 0.98
CASC4-204ENST00000557945 NCDNQ9UBB6 729 aa21.17■□□□□ 0.98
CASC4-204ENST00000557945 SLC2A6Q9UGQ3 507 aa21.17■□□□□ 0.98
CASC4-204ENST00000557945 OR1A2Q9Y585 309 aa21.17■□□□□ 0.98
CASC4-204ENST00000557945 PLXNA2O75051 1894 aa21.17■□□□□ 0.98
CASC4-204ENST00000557945 GPR179Q6PRD1 2367 aa21.17■□□□□ 0.98
CASC4-204ENST00000557945 MYLKQ15746 1914 aa21.16■□□□□ 0.98
CASC4-204ENST00000557945 GLYATL1P3A0A0U1RQE8 302 aa21.16■□□□□ 0.98
CASC4-204ENST00000557945 A0A1W2PR77 199 aa21.16■□□□□ 0.98
CASC4-204ENST00000557945 BANF1O75531 89 aa21.16■□□□□ 0.98
CASC4-204ENST00000557945 WNT1P04628 370 aa21.16■□□□□ 0.98
CASC4-204ENST00000557945 C21orf59P57076 290 aa21.16■□□□□ 0.98
CASC4-204ENST00000557945 NHLH1Q02575 133 aa21.16■□□□□ 0.98
CASC4-204ENST00000557945 CHRNA6Q15825 494 aa21.16■□□□□ 0.98
CASC4-204ENST00000557945 DUOXA1Q1HG43 343 aa21.16■□□□□ 0.98
CASC4-204ENST00000557945 MSS51Q4VC12 460 aa21.16■□□□□ 0.98
CASC4-204ENST00000557945 CES3Q6UWW8 571 aa21.16■□□□□ 0.98
CASC4-204ENST00000557945 ZDHHC24Q6UX98 284 aa21.16■□□□□ 0.98
CASC4-204ENST00000557945 NLRP8Q86W28 1048 aa21.16■□□□□ 0.98
CASC4-204ENST00000557945 OR13H1Q8NG92 308 aa21.16■□□□□ 0.98
CASC4-204ENST00000557945 CEP76Q8TAP6 659 aa21.16■□□□□ 0.98
CASC4-204ENST00000557945 FBXO25Q8TCJ0 367 aa21.16■□□□□ 0.98
CASC4-204ENST00000557945 PTCD2Q8WV60 388 aaKnown RBP21.16■□□□□ 0.98
CASC4-204ENST00000557945 ZNF778Q96MU6 729 aa21.16■□□□□ 0.98
CASC4-204ENST00000557945 ZSCAN5AQ9BUG6 496 aa21.16■□□□□ 0.98
CASC4-204ENST00000557945 APOOQ9BUR5 198 aa21.16■□□□□ 0.98
CASC4-204ENST00000557945 WDR26Q9H7D7 661 aa21.16■□□□□ 0.98
CASC4-204ENST00000557945 NFKBIL1Q9UBC1 381 aaPredicted RBP21.16■□□□□ 0.98
CASC4-204ENST00000557945 SOX13Q9UN79 622 aa21.16■□□□□ 0.98
CASC4-204ENST00000557945 TNRC6BQ9UPQ9 1833 aaKnown RBP21.16■□□□□ 0.98
CASC4-204ENST00000557945 MAGEB16A2A368 324 aa21.15■□□□□ 0.98
CASC4-204ENST00000557945 PYGLP06737 847 aa21.15■□□□□ 0.98
CASC4-204ENST00000557945 THEGLP0DJG4 465 aa21.15■□□□□ 0.98
CASC4-204ENST00000557945 RABIFP47224 123 aa21.15■□□□□ 0.98
CASC4-204ENST00000557945 PFN3P60673 137 aa21.15■□□□□ 0.98
CASC4-204ENST00000557945 HLTFQ14527 1009 aaKnown RBP eCLIP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms