RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 BPIP17213 487 aa14.28□□□□□ -0.12
USP3-205ENST00000557884 HTR1BP28222 390 aa14.28□□□□□ -0.12
USP3-205ENST00000557884 ARRB1P49407 418 aaPredicted RBP14.28□□□□□ -0.12
USP3-205ENST00000557884 DPTQ07507 201 aa14.28□□□□□ -0.12
USP3-205ENST00000557884 BNIP3Q12983 259 aa14.28□□□□□ -0.12
USP3-205ENST00000557884 EIF2B5Q13144 721 aaKnown RBP14.28□□□□□ -0.12
USP3-205ENST00000557884 SEPT6Q14141 434 aa14.28□□□□□ -0.12
USP3-205ENST00000557884 PTK2BQ14289 1009 aa14.28□□□□□ -0.12
USP3-205ENST00000557884 ENPP7Q6UWV6 458 aa14.28□□□□□ -0.12
USP3-205ENST00000557884 MACC1Q6ZN28 852 aa14.28□□□□□ -0.12
USP3-205ENST00000557884 TRIM74Q86UV6 250 aa14.28□□□□□ -0.12
USP3-205ENST00000557884 PARGQ86W56 976 aa14.28□□□□□ -0.12
USP3-205ENST00000557884 GATAD2AQ86YP4 633 aa14.28□□□□□ -0.12
USP3-205ENST00000557884 OXR1Q8N573 874 aa14.28□□□□□ -0.12
USP3-205ENST00000557884 DNAAF3Q8N9W5 541 aa14.28□□□□□ -0.12
USP3-205ENST00000557884 GPR26Q8NDV2 337 aa14.28□□□□□ -0.12
USP3-205ENST00000557884 GRK7Q8WTQ7 553 aa14.28□□□□□ -0.12
USP3-205ENST00000557884 ZNF592Q92610 1267 aa14.28□□□□□ -0.12
USP3-205ENST00000557884 TSACCQ96A04 125 aaPredicted RBP14.28□□□□□ -0.12
USP3-205ENST00000557884 SPATA16Q9BXB7 569 aa14.28□□□□□ -0.12
USP3-205ENST00000557884 TCEAL2Q9H3H9 227 aaPredicted RBP14.28□□□□□ -0.12
USP3-205ENST00000557884 ARNT2Q9HBZ2 717 aa14.28□□□□□ -0.12
USP3-205ENST00000557884 PHPT1Q9NRX4 125 aaPredicted RBP14.28□□□□□ -0.12
USP3-205ENST00000557884 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.28□□□□□ -0.125e-6■■■□□ 19.1
USP3-205ENST00000557884 KLF15Q9UIH9 416 aa14.28□□□□□ -0.12
USP3-205ENST00000557884 PNMA8BQ9ULN7 279 aaPredicted RBP14.28□□□□□ -0.12
USP3-205ENST00000557884 KCTD3Q9Y597 815 aa14.28□□□□□ -0.12
USP3-205ENST00000557884 CACNA1EQ15878 2313 aa14.27□□□□□ -0.12
USP3-205ENST00000557884 KNL1Q8NG31 2342 aa14.27□□□□□ -0.12
USP3-205ENST00000557884 TMEM202A6NGA9 273 aa14.27□□□□□ -0.13
USP3-205ENST00000557884 ERI2A8K979 691 aaKnown RBP14.27□□□□□ -0.13
USP3-205ENST00000557884 TOR1BO14657 336 aa14.27□□□□□ -0.13
USP3-205ENST00000557884 SLC30A4O14863 429 aa14.27□□□□□ -0.13
USP3-205ENST00000557884 INPP4BO15327 924 aa14.27□□□□□ -0.13
USP3-205ENST00000557884 STX7O15400 261 aaKnown RBP14.27□□□□□ -0.13
USP3-205ENST00000557884 SUN1O94901 812 aa14.27□□□□□ -0.13
USP3-205ENST00000557884 ECEL1O95672 775 aa14.27□□□□□ -0.13
USP3-205ENST00000557884 CD59P13987 128 aa14.27□□□□□ -0.13
USP3-205ENST00000557884 EPHA8P29322 1005 aaPredicted RBP14.27□□□□□ -0.13
USP3-205ENST00000557884 HMGCLP35914 325 aa14.27□□□□□ -0.13
USP3-205ENST00000557884 TRIM23P36406 574 aa14.27□□□□□ -0.13
USP3-205ENST00000557884 CDK3Q00526 305 aa14.27□□□□□ -0.13
USP3-205ENST00000557884 MSLNQ13421 630 aaPredicted RBP14.27□□□□□ -0.13
USP3-205ENST00000557884 POU6F1Q14863 301 aa14.27□□□□□ -0.13
USP3-205ENST00000557884 PPP1R7Q15435 360 aa14.27□□□□□ -0.13
USP3-205ENST00000557884 TCEA2Q15560 299 aa14.27□□□□□ -0.13
USP3-205ENST00000557884 ALG11Q2TAA5 492 aa14.27□□□□□ -0.13
USP3-205ENST00000557884 HENMT1Q5T8I9 393 aaKnown RBP14.27□□□□□ -0.13
USP3-205ENST00000557884 KCTD16Q68DU8 428 aa14.27□□□□□ -0.13
USP3-205ENST00000557884 DOK6Q6PKX4 331 aa14.27□□□□□ -0.13
USP3-205ENST00000557884 ADAMTSL4Q6UY14 1074 aa14.27□□□□□ -0.13
USP3-205ENST00000557884 C4orf22Q6V702 233 aa14.27□□□□□ -0.13
USP3-205ENST00000557884 RD3Q7Z3Z2 195 aa14.27□□□□□ -0.13
USP3-205ENST00000557884 LINC00523Q86TU6 105 aa14.27□□□□□ -0.13
USP3-205ENST00000557884 HID1Q8IV36 788 aa14.27□□□□□ -0.13
USP3-205ENST00000557884 RBFAQ8N0V3 343 aa14.27□□□□□ -0.13
USP3-205ENST00000557884 BRSK1Q8TDC3 778 aa14.27□□□□□ -0.13
USP3-205ENST00000557884 WDR92Q96MX6 357 aa14.27□□□□□ -0.13
USP3-205ENST00000557884 TEX101Q9BY14 249 aa14.27□□□□□ -0.13
USP3-205ENST00000557884 SUDS3Q9H7L9 328 aaPredicted RBP14.27□□□□□ -0.13
USP3-205ENST00000557884 RAD18Q9NS91 495 aa14.27□□□□□ -0.13
USP3-205ENST00000557884 IL17CQ9P0M4 197 aa14.27□□□□□ -0.13
USP3-205ENST00000557884 RNF14Q9UBS8 474 aa14.27□□□□□ -0.13
USP3-205ENST00000557884 KLQ9UEF7 1012 aa14.27□□□□□ -0.13
USP3-205ENST00000557884 FEZ2Q9UHY8 353 aaPredicted RBP14.27□□□□□ -0.13
USP3-205ENST00000557884 MOSPD1Q9UJG1 213 aa14.27□□□□□ -0.13
USP3-205ENST00000557884 NEU2Q9Y3R4 380 aa14.27□□□□□ -0.13
USP3-205ENST00000557884 PKP3Q9Y446 797 aa14.27□□□□□ -0.13
USP3-205ENST00000557884 DOCK9Q9BZ29 2069 aa14.27□□□□□ -0.13
USP3-205ENST00000557884 TCRBV7S3A2A0A539 114 aa14.26□□□□□ -0.13
USP3-205ENST00000557884 CCDC78A2IDD5 438 aa14.26□□□□□ -0.13
USP3-205ENST00000557884 C2orf81A6NN90 581 aa14.26□□□□□ -0.13
USP3-205ENST00000557884 FADS2P1A8MWK0 482 aa14.26□□□□□ -0.13
USP3-205ENST00000557884 SH3BP5O60239 455 aa14.26□□□□□ -0.13
USP3-205ENST00000557884 DFNA5O60443 496 aa14.26□□□□□ -0.13
USP3-205ENST00000557884 GAS8O95995 478 aa14.26□□□□□ -0.13
USP3-205ENST00000557884 ZNF883P0CG24 379 aa14.26□□□□□ -0.13
USP3-205ENST00000557884 MYCLP1P12525 358 aaPredicted RBP14.26□□□□□ -0.13
USP3-205ENST00000557884 JUNDP17535 347 aa14.26□□□□□ -0.13
USP3-205ENST00000557884 LPOP22079 712 aaPredicted RBP14.26□□□□□ -0.13
USP3-205ENST00000557884 RXRGP48443 463 aa14.26□□□□□ -0.13
USP3-205ENST00000557884 POLD2P49005 469 aa14.26□□□□□ -0.13
USP3-205ENST00000557884 KIAA1024LP59773 190 aa14.26□□□□□ -0.13
USP3-205ENST00000557884 TMPRSS15P98073 1019 aa14.26□□□□□ -0.13
USP3-205ENST00000557884 CDH17Q12864 832 aa14.26□□□□□ -0.13
USP3-205ENST00000557884 TAF1AQ15573 450 aaPredicted RBP14.26□□□□□ -0.13
USP3-205ENST00000557884 CCDC38Q502W7 563 aa14.26□□□□□ -0.13
USP3-205ENST00000557884 CERCAMQ5T4B2 595 aa14.26□□□□□ -0.13
USP3-205ENST00000557884 ANKRD22Q5VYY1 191 aa14.26□□□□□ -0.13
USP3-205ENST00000557884 FAM151BQ6UXP7 276 aa14.26□□□□□ -0.13
USP3-205ENST00000557884 NLRP8Q86W28 1048 aa14.26□□□□□ -0.13
USP3-205ENST00000557884 RAVER1Q8IY67 606 aaKnown RBP14.26□□□□□ -0.13
USP3-205ENST00000557884 PHACTR4Q8IZ21 702 aa14.26□□□□□ -0.13
USP3-205ENST00000557884 OR4K2Q8NGD2 314 aa14.26□□□□□ -0.13
USP3-205ENST00000557884 OR13C4Q8NGS5 318 aa14.26□□□□□ -0.13
USP3-205ENST00000557884 SETD7Q8WTS6 366 aaKnown RBP14.26□□□□□ -0.13
USP3-205ENST00000557884 OR1E3Q8WZA6 343 aa14.26□□□□□ -0.13
USP3-205ENST00000557884 PDXPQ96GD0 296 aa14.26□□□□□ -0.13
USP3-205ENST00000557884 CAMK1GQ96NX5 476 aa14.26□□□□□ -0.13
USP3-205ENST00000557884 FGF22Q9HCT0 170 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms