RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 HID1Q8IV36 788 aa8.32□□□□□ -1.08
PSEN1-223ENST00000557511 PHACTR4Q8IZ21 702 aa8.32□□□□□ -1.08
PSEN1-223ENST00000557511 ZNF567Q8N184 647 aa8.32□□□□□ -1.08
PSEN1-223ENST00000557511 FSTL5Q8N475 847 aaPredicted RBP8.32□□□□□ -1.08
PSEN1-223ENST00000557511 EID2Q8N6I1 236 aa8.32□□□□□ -1.08
PSEN1-223ENST00000557511 SPATA22Q8NHS9 363 aa8.32□□□□□ -1.08
PSEN1-223ENST00000557511 LMX1AQ8TE12 382 aa8.32□□□□□ -1.08
PSEN1-223ENST00000557511 SAP25Q8TEE9 199 aa8.32□□□□□ -1.08
PSEN1-223ENST00000557511 AP2M1Q96CW1 435 aa8.32□□□□□ -1.08
PSEN1-223ENST00000557511 DTD2Q96FN9 168 aa8.32□□□□□ -1.08
PSEN1-223ENST00000557511 CNDP2Q96KP4 475 aaKnown RBP8.32□□□□□ -1.08
PSEN1-223ENST00000557511 COQ10AQ96MF6 247 aa8.32□□□□□ -1.08
PSEN1-223ENST00000557511 CDH19Q9H159 772 aa8.32□□□□□ -1.08
PSEN1-223ENST00000557511 TRABDQ9H4I3 376 aa8.32□□□□□ -1.08
PSEN1-223ENST00000557511 ZFYVE1Q9HBF4 777 aa8.32□□□□□ -1.08
PSEN1-223ENST00000557511 MBNL1Q9NR56 388 aaKnown RBP8.32□□□□□ -1.08
PSEN1-223ENST00000557511 HOMER3Q9NSC5 361 aa8.32□□□□□ -1.08
PSEN1-223ENST00000557511 UBP1Q9NZI7 540 aa8.32□□□□□ -1.08
PSEN1-223ENST00000557511 NCKIPSDQ9NZQ3 722 aa8.32□□□□□ -1.08
PSEN1-223ENST00000557511 HACD3Q9P035 362 aa8.32□□□□□ -1.08
PSEN1-223ENST00000557511 APOBEC3BQ9UH17 382 aaKnown RBP8.32□□□□□ -1.08
PSEN1-223ENST00000557511 ZNF148Q9UQR1 794 aa8.32□□□□□ -1.08
PSEN1-223ENST00000557511 OR1A2Q9Y585 309 aa8.32□□□□□ -1.08
PSEN1-223ENST00000557511 NUMA1Q14980 2115 aa8.32□□□□□ -1.08
PSEN1-223ENST00000557511 VPS13AQ96RL7 3174 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 SPAARA0A1B0GVQ0 90 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 E7EVH7 732 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 FFAR2O15552 330 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 PSMD3O43242 534 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 AQP9O43315 295 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 CEP104O60308 925 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 PIAS2O75928 621 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 CLDN7O95471 211 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 ASMTLO95671 621 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 MT-CYBP00156 380 aaPredicted RBP8.31□□□□□ -1.08
PSEN1-223ENST00000557511 EPOP01588 193 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 SLC4A1P02730 911 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 FGF1P05230 155 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 HOXC4P09017 264 aaPredicted RBP8.31□□□□□ -1.08
PSEN1-223ENST00000557511 NME1P15531 152 aaKnown RBP8.31□□□□□ -1.08
PSEN1-223ENST00000557511 DGKAP23743 735 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 WNT3AP56704 352 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 KIAA1024LP59773 190 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 SRP54P61011 504 aaKnown RBP8.31□□□□□ -1.08
PSEN1-223ENST00000557511 FZD2Q14332 565 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 LONRF2Q1L5Z9 754 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 P3H1Q32P28 736 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 CCDC157Q569K6 752 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 ANKRD20A2Q5SQ80 823 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 ANKRD20A1Q5TYW2 823 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 ANKRD20A3Q5VUR7 823 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 ZDHHC20Q5W0Z9 365 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 AADACL2Q6P093 401 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 Q6ZVL8 140 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 ZNF765Q7L2R6 523 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 GSTA5Q7RTV2 222 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 HSD11B1LQ7Z5J1 315 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 TSPAN33Q86UF1 283 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 GKN2Q86XP6 184 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 SLC13A5Q86YT5 568 aaPredicted RBP8.31□□□□□ -1.08
PSEN1-223ENST00000557511 SLC25A41Q8N5S1 370 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 CCDC89Q8N998 374 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 IPMKQ8NFU5 416 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 OR56A4Q8NGH8 313 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 VOPP1Q96AW1 172 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 TBATAQ96M53 351 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 SPATA13Q96N96 652 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 CAMK1GQ96NX5 476 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 LYSMD1Q96S90 227 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 NAP1L3Q99457 506 aaPredicted RBP8.31□□□□□ -1.08
PSEN1-223ENST00000557511 FAM118BQ9BPY3 351 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 GBA3Q9H227 469 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 FAM83DQ9H4H8 585 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 MAGEE1Q9HCI5 957 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.31□□□□□ -1.08
PSEN1-223ENST00000557511 JRKLQ9Y4A0 524 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 CSNK1G3Q9Y6M4 447 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 ZNF292O60281 2723 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 DMDP11532 3685 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 GON4LQ3T8J9 2241 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 USP34Q70CQ2 3546 aa8.31□□□□□ -1.08
PSEN1-223ENST00000557511 C5orf60A6NFR6 353 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 C2orf81A6NN90 581 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 F5H423 210 aaPredicted RBP8.3□□□□□ -1.08
PSEN1-223ENST00000557511 ENC1O14682 589 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 TNFRSF10CO14798 259 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 GIPC1O14908 333 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 SCAMP1O15126 338 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 MAN1A2O60476 641 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 PRLP01236 227 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 IFNB1P01574 187 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 MMP2P08253 660 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 ADRB1P08588 477 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 C1SP09871 688 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 FTH1P19P0C7X4 201 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 MYCLP1P12525 358 aaPredicted RBP8.3□□□□□ -1.08
PSEN1-223ENST00000557511 LHCGRP22888 699 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 TEAD1P28347 426 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 HK3P52790 923 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 STC1P52823 247 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms