RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 ANLNQ9NQW6 1124 aa9.34□□□□□ -0.91
NEDD1-211ENST00000557454 KBTBD4Q9NVX7 518 aa9.34□□□□□ -0.91
NEDD1-211ENST00000557454 SH3BGRL2Q9UJC5 107 aa9.34□□□□□ -0.91
NEDD1-211ENST00000557454 SNX7Q9UNH6 387 aa9.34□□□□□ -0.91
NEDD1-211ENST00000557454 FRMD4BQ9Y2L6 1034 aa9.34□□□□□ -0.91
NEDD1-211ENST00000557454 SRPRBQ9Y5M8 271 aaKnown RBP9.34□□□□□ -0.91
NEDD1-211ENST00000557454 CLIC4Q9Y696 253 aa9.34□□□□□ -0.91
NEDD1-211ENST00000557454 FER1L5A0AVI2 2057 aa9.34□□□□□ -0.91
NEDD1-211ENST00000557454 A0A1W2PQJ5 194 aa9.33□□□□□ -0.92
NEDD1-211ENST00000557454 RCCD1A6NED2 376 aa9.33□□□□□ -0.92
NEDD1-211ENST00000557454 PDE2AO00408 941 aaPredicted RBP9.33□□□□□ -0.92
NEDD1-211ENST00000557454 WIPF1O43516 503 aa9.33□□□□□ -0.92
NEDD1-211ENST00000557454 PIGNO95427 931 aa9.33□□□□□ -0.92
NEDD1-211ENST00000557454 ACVRL1P37023 503 aa9.33□□□□□ -0.92
NEDD1-211ENST00000557454 POLD2P49005 469 aa9.33□□□□□ -0.92
NEDD1-211ENST00000557454 EPHA4P54764 986 aa9.33□□□□□ -0.92
NEDD1-211ENST00000557454 YWHAZP63104 245 aaKnown RBP9.33□□□□□ -0.92
NEDD1-211ENST00000557454 CSNK1G2P78368 415 aa9.33□□□□□ -0.92
NEDD1-211ENST00000557454 ADORA2A-AS1P86434 159 aa9.33□□□□□ -0.92
NEDD1-211ENST00000557454 OTUD4Q01804 1114 aaKnown RBP9.33□□□□□ -0.92
NEDD1-211ENST00000557454 GNA12Q03113 381 aa9.33□□□□□ -0.92
NEDD1-211ENST00000557454 NME3Q13232 169 aa9.33□□□□□ -0.92
NEDD1-211ENST00000557454 CUL2Q13617 745 aa9.33□□□□□ -0.92
NEDD1-211ENST00000557454 MYBPC3Q14896 1274 aa9.33□□□□□ -0.92
NEDD1-211ENST00000557454 ASIC2Q16515 512 aa9.33□□□□□ -0.92
NEDD1-211ENST00000557454 KRT39Q6A163 491 aa9.33□□□□□ -0.92
NEDD1-211ENST00000557454 ERAP2Q6P179 960 aa9.33□□□□□ -0.92
NEDD1-211ENST00000557454 XKRXQ6PP77 449 aa9.33□□□□□ -0.92
NEDD1-211ENST00000557454 ZNF783Q6ZMS7 281 aa9.33□□□□□ -0.92
NEDD1-211ENST00000557454 UNC13DQ70J99 1090 aa9.33□□□□□ -0.92
NEDD1-211ENST00000557454 PACS2Q86VP3 889 aa9.33□□□□□ -0.92
NEDD1-211ENST00000557454 ENDOVQ8N8Q3 282 aaKnown RBP9.33□□□□□ -0.92
NEDD1-211ENST00000557454 NETO2Q8NC67 525 aa9.33□□□□□ -0.92
NEDD1-211ENST00000557454 MR1Q95460 341 aa9.33□□□□□ -0.92
NEDD1-211ENST00000557454 TGM7Q96PF1 710 aa9.33□□□□□ -0.92
NEDD1-211ENST00000557454 WDR77Q9BQA1 342 aaPredicted RBP9.33□□□□□ -0.92
NEDD1-211ENST00000557454 TBC1D10AQ9BXI6 508 aa9.33□□□□□ -0.92
NEDD1-211ENST00000557454 FRMD8Q9BZ67 464 aaPredicted RBP9.33□□□□□ -0.92
NEDD1-211ENST00000557454 LRRC27Q9C0I9 530 aa9.33□□□□□ -0.92
NEDD1-211ENST00000557454 ZNF552Q9H707 407 aaPredicted RBP9.33□□□□□ -0.92
NEDD1-211ENST00000557454 CCM2LQ9NUG4 571 aaPredicted RBP9.33□□□□□ -0.92
NEDD1-211ENST00000557454 OLAHQ9NV23 265 aa9.33□□□□□ -0.92
NEDD1-211ENST00000557454 RAB20Q9NX57 234 aa9.33□□□□□ -0.92
NEDD1-211ENST00000557454 FAM13BQ9NYF5 915 aa9.33□□□□□ -0.92
NEDD1-211ENST00000557454 KIAA1468Q9P260 1216 aa9.33□□□□□ -0.92
NEDD1-211ENST00000557454 CACNA1CQ13936 2221 aa9.32□□□□□ -0.92
NEDD1-211ENST00000557454 ANK2Q01484 3957 aa9.32□□□□□ -0.92
NEDD1-211ENST00000557454 DRGXA6NNA5 263 aa9.32□□□□□ -0.92
NEDD1-211ENST00000557454 I6L893 689 aaPredicted RBP9.32□□□□□ -0.92
NEDD1-211ENST00000557454 INSIG1O15503 277 aa9.32□□□□□ -0.92
NEDD1-211ENST00000557454 RASSF9O75901 435 aa9.32□□□□□ -0.92
NEDD1-211ENST00000557454 C9P02748 559 aa9.32□□□□□ -0.92
NEDD1-211ENST00000557454 GM2AP17900 193 aa9.32□□□□□ -0.92
NEDD1-211ENST00000557454 TSFMP43897 325 aaKnown RBP9.32□□□□□ -0.92
NEDD1-211ENST00000557454 RPL34P49207 117 aaKnown RBP9.32□□□□□ -0.92
NEDD1-211ENST00000557454 MXI1P50539 228 aa9.32□□□□□ -0.92
NEDD1-211ENST00000557454 SUOXP51687 545 aa9.32□□□□□ -0.92
NEDD1-211ENST00000557454 CDC16Q13042 620 aa9.32□□□□□ -0.92
NEDD1-211ENST00000557454 CNGA2Q16280 664 aa9.32□□□□□ -0.92
NEDD1-211ENST00000557454 HIF1AQ16665 826 aa9.32□□□□□ -0.92
NEDD1-211ENST00000557454 UGP2Q16851 508 aa9.32□□□□□ -0.92
NEDD1-211ENST00000557454 TMCO4Q5TGY1 634 aa9.32□□□□□ -0.92
NEDD1-211ENST00000557454 PLEKHA7Q6IQ23 1121 aa9.32□□□□□ -0.92
NEDD1-211ENST00000557454 PNCKQ6P2M8 343 aa9.32□□□□□ -0.92
NEDD1-211ENST00000557454 MTFR2Q6P444 385 aa9.32□□□□□ -0.92
NEDD1-211ENST00000557454 CNNM4Q6P4Q7 775 aa9.32□□□□□ -0.92
NEDD1-211ENST00000557454 MEX3BQ6ZN04 569 aaKnown RBP9.32□□□□□ -0.92
NEDD1-211ENST00000557454 INTS8Q75QN2 995 aaKnown RBP9.32□□□□□ -0.92
NEDD1-211ENST00000557454 DEFB106AQ8N104 65 aa9.32□□□□□ -0.92
NEDD1-211ENST00000557454 GALNT16Q8N428 558 aa9.32□□□□□ -0.92
NEDD1-211ENST00000557454 UBR7Q8N806 425 aa9.32□□□□□ -0.92
NEDD1-211ENST00000557454 FBXL13Q8NEE6 735 aa9.32□□□□□ -0.92
NEDD1-211ENST00000557454 TMEM174Q8WUU8 243 aa9.32□□□□□ -0.92
NEDD1-211ENST00000557454 GDAP1L1Q96MZ0 367 aa9.32□□□□□ -0.92
NEDD1-211ENST00000557454 TMEM121Q9BTD3 319 aa9.32□□□□□ -0.92
NEDD1-211ENST00000557454 CHST8Q9H2A9 424 aa9.32□□□□□ -0.92
NEDD1-211ENST00000557454 KCTD10Q9H3F6 313 aa9.32□□□□□ -0.92
NEDD1-211ENST00000557454 SARS2Q9NP81 518 aaKnown RBP9.32□□□□□ -0.92
NEDD1-211ENST00000557454 ZNF212Q9UDV6 495 aa9.32□□□□□ -0.92
NEDD1-211ENST00000557454 KIAA1257Q9ULG3 409 aa9.32□□□□□ -0.92
NEDD1-211ENST00000557454 MXRA5Q9NR99 2828 aa9.31□□□□□ -0.92
NEDD1-211ENST00000557454 A0A0U1RQS6 177 aa9.31□□□□□ -0.92
NEDD1-211ENST00000557454 E5RJQ4 531 aa9.31□□□□□ -0.92
NEDD1-211ENST00000557454 KIF1CO43896 1103 aaKnown RBP9.31□□□□□ -0.92
NEDD1-211ENST00000557454 RHOBTB3O94955 611 aa9.31□□□□□ -0.92
NEDD1-211ENST00000557454 CLDN14O95500 239 aa9.31□□□□□ -0.92
NEDD1-211ENST00000557454 ERCC5P28715 1186 aaPredicted RBP9.31□□□□□ -0.92
NEDD1-211ENST00000557454 TDGF1P3P51864 188 aa9.31□□□□□ -0.92
NEDD1-211ENST00000557454 YWHAEP62258 255 aaKnown RBP9.31□□□□□ -0.92
NEDD1-211ENST00000557454 PDE1BQ01064 536 aa9.31□□□□□ -0.92
NEDD1-211ENST00000557454 RAD51Q06609 339 aa9.31□□□□□ -0.92
NEDD1-211ENST00000557454 RALGDSQ12967 914 aa9.31□□□□□ -0.92
NEDD1-211ENST00000557454 MTA1Q13330 715 aa9.31□□□□□ -0.92
NEDD1-211ENST00000557454 TUBB3Q13509 450 aa9.31□□□□□ -0.92
NEDD1-211ENST00000557454 CEBPEQ15744 281 aa9.31□□□□□ -0.92
NEDD1-211ENST00000557454 IZUMO3Q5VZ72 239 aa9.31□□□□□ -0.92
NEDD1-211ENST00000557454 LCN10Q6JVE6 187 aa9.31□□□□□ -0.92
NEDD1-211ENST00000557454 DOK6Q6PKX4 331 aa9.31□□□□□ -0.92
NEDD1-211ENST00000557454 TMEM270Q6UE05 265 aa9.31□□□□□ -0.92
NEDD1-211ENST00000557454 FAM180AQ6UWF9 173 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms