RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 CLYBLQ8N0X4 340 aa17.68■□□□□ 0.42
XRCC3-218ENST00000557439 AHI1Q8N157 1196 aa17.68■□□□□ 0.42
XRCC3-218ENST00000557439 GIPC2Q8TF65 315 aa17.68■□□□□ 0.42
XRCC3-218ENST00000557439 TUBGCP3Q96CW5 907 aa17.68■□□□□ 0.42
XRCC3-218ENST00000557439 SLC30A3Q99726 388 aa17.68■□□□□ 0.42
XRCC3-218ENST00000557439 ZBED2Q9BTP6 218 aa17.68■□□□□ 0.42
XRCC3-218ENST00000557439 SMIM31A0A1B0GVY4 71 aa17.68■□□□□ 0.42
XRCC3-218ENST00000557439 TCRBV3S1A0A5B6 114 aa17.68■□□□□ 0.42
XRCC3-218ENST00000557439 VWA8A3KMH1 1905 aa17.68■□□□□ 0.42
XRCC3-218ENST00000557439 SUPT3HB4E1H0 165 aa17.68■□□□□ 0.42
XRCC3-218ENST00000557439 H3BSA7 217 aa17.68■□□□□ 0.42
XRCC3-218ENST00000557439 GPR39O43194 453 aa17.68■□□□□ 0.42
XRCC3-218ENST00000557439 CLASP2O75122 1294 aaKnown RBP17.68■□□□□ 0.42
XRCC3-218ENST00000557439 SUPT3HO75486 399 aa17.68■□□□□ 0.42
XRCC3-218ENST00000557439 CAPNS1P04632 268 aa17.68■□□□□ 0.42
XRCC3-218ENST00000557439 PCSK6P29122 969 aa17.68■□□□□ 0.42
XRCC3-218ENST00000557439 CDH15P55291 814 aa17.68■□□□□ 0.42
XRCC3-218ENST00000557439 DHFR2Q86XF0 187 aa17.68■□□□□ 0.42
XRCC3-218ENST00000557439 LRRC49Q8IUZ0 686 aa17.68■□□□□ 0.42
XRCC3-218ENST00000557439 LINC01599Q8WXQ3 324 aa17.68■□□□□ 0.42
XRCC3-218ENST00000557439 UPF1Q92900 1129 aaKnown RBP eCLIP17.68■□□□□ 0.42
XRCC3-218ENST00000557439 VPS33AQ96AX1 596 aa17.68■□□□□ 0.42
XRCC3-218ENST00000557439 BTN2A3PQ96KV6 586 aa17.68■□□□□ 0.42
XRCC3-218ENST00000557439 TEX37Q96LM6 180 aa17.68■□□□□ 0.42
XRCC3-218ENST00000557439 TMEM79Q9BSE2 394 aa17.68■□□□□ 0.42
XRCC3-218ENST00000557439 ARHGEF37A1IGU5 675 aa17.67■□□□□ 0.42
XRCC3-218ENST00000557439 CDC7O00311 574 aa17.67■□□□□ 0.42
XRCC3-218ENST00000557439 AZIN1O14977 448 aa17.67■□□□□ 0.42
XRCC3-218ENST00000557439 ADAMTS4O75173 837 aa17.67■□□□□ 0.42
XRCC3-218ENST00000557439 HGFP14210 728 aa17.67■□□□□ 0.42
XRCC3-218ENST00000557439 EEF1DP29692 281 aaKnown RBP17.67■□□□□ 0.42
XRCC3-218ENST00000557439 PSMD8P48556 350 aa17.67■□□□□ 0.42
XRCC3-218ENST00000557439 GATMP50440 423 aa17.67■□□□□ 0.42
XRCC3-218ENST00000557439 TSNQ15631 228 aaKnown RBP17.67■□□□□ 0.42
XRCC3-218ENST00000557439 PLA2G4EQ3MJ16 856 aa17.67■□□□□ 0.42
XRCC3-218ENST00000557439 SETMARQ53H47 684 aaPredicted RBP17.67■□□□□ 0.42
XRCC3-218ENST00000557439 C8orf82Q6P1X6 216 aaPredicted RBP17.67■□□□□ 0.42
XRCC3-218ENST00000557439 RSPO2Q6UXX9 243 aaPredicted RBP17.67■□□□□ 0.42
XRCC3-218ENST00000557439 TMEM126BQ8IUX1 230 aa17.67■□□□□ 0.42
XRCC3-218ENST00000557439 ATP6V0D2Q8N8Y2 350 aa17.67■□□□□ 0.42
XRCC3-218ENST00000557439 OR4L1Q8NH43 312 aa17.67■□□□□ 0.42
XRCC3-218ENST00000557439 NUDT8Q8WV74 236 aa17.67■□□□□ 0.42
XRCC3-218ENST00000557439 SOCS4Q8WXH5 440 aa17.67■□□□□ 0.42
XRCC3-218ENST00000557439 DGCR14Q96DF8 476 aaKnown RBP17.67■□□□□ 0.42
XRCC3-218ENST00000557439 PHF12Q96QT6 1004 aa17.67■□□□□ 0.42
XRCC3-218ENST00000557439 ATOH8Q96SQ7 321 aa17.67■□□□□ 0.42
XRCC3-218ENST00000557439 SPON2Q9BUD6 331 aa17.67■□□□□ 0.42
XRCC3-218ENST00000557439 ZNF696Q9H7X3 374 aa17.67■□□□□ 0.42
XRCC3-218ENST00000557439 CAAP1Q9H8G2 361 aa17.67■□□□□ 0.42
XRCC3-218ENST00000557439 CATSPERZQ9NTU4 200 aa17.67■□□□□ 0.42
XRCC3-218ENST00000557439 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.67■□□□□ 0.42
XRCC3-218ENST00000557439 MED16Q9Y2X0 877 aa17.67■□□□□ 0.42
XRCC3-218ENST00000557439 ARHGAP10A1A4S6 786 aa17.67■□□□□ 0.42
XRCC3-218ENST00000557439 RTN3O95197 1032 aaPredicted RBP17.67■□□□□ 0.42
XRCC3-218ENST00000557439 CAP1Q01518 475 aa17.67■□□□□ 0.42
XRCC3-218ENST00000557439 BIRC2Q13490 618 aa17.67■□□□□ 0.42
XRCC3-218ENST00000557439 MAP7D1Q3KQU3 841 aa17.67■□□□□ 0.42
XRCC3-218ENST00000557439 CTXN3Q4LDR2 81 aa17.67■□□□□ 0.42
XRCC3-218ENST00000557439 SAMD4BQ5PRF9 694 aaKnown RBP17.67■□□□□ 0.42
XRCC3-218ENST00000557439 UGT3A1Q6NUS8 523 aa17.67■□□□□ 0.42
XRCC3-218ENST00000557439 GLB1LQ6UWU2 654 aa17.67■□□□□ 0.42
XRCC3-218ENST00000557439 TADA1Q96BN2 335 aa17.67■□□□□ 0.42
XRCC3-218ENST00000557439 ZIC5Q96T25 663 aa17.67■□□□□ 0.42
XRCC3-218ENST00000557439 POLR1EQ9GZS1 481 aaKnown RBP17.67■□□□□ 0.42
XRCC3-218ENST00000557439 PIF1Q9H611 641 aa17.67■□□□□ 0.42
XRCC3-218ENST00000557439 SPC25Q9HBM1 224 aa17.67■□□□□ 0.42
XRCC3-218ENST00000557439 VCX3AQ9NNX9 186 aa17.67■□□□□ 0.42
XRCC3-218ENST00000557439 POLG2Q9UHN1 485 aa17.67■□□□□ 0.42
XRCC3-218ENST00000557439 USP22Q9UPT9 525 aa17.67■□□□□ 0.42
XRCC3-218ENST00000557439 IGLV3-10A0A075B6K4 115 aa17.66■□□□□ 0.42
XRCC3-218ENST00000557439 NT5C1B-RDH14C9J2C7 533 aa17.66■□□□□ 0.42
XRCC3-218ENST00000557439 SCAMP3O14828 347 aaKnown RBP17.66■□□□□ 0.42
XRCC3-218ENST00000557439 MTHFD1P11586 935 aaKnown RBP17.66■□□□□ 0.42
XRCC3-218ENST00000557439 SLC7A1P30825 629 aa17.66■□□□□ 0.42
XRCC3-218ENST00000557439 IL10RBQ08334 325 aa17.66■□□□□ 0.42
XRCC3-218ENST00000557439 APOFQ13790 326 aa17.66■□□□□ 0.42
XRCC3-218ENST00000557439 FAM171A1Q5VUB5 890 aa17.66■□□□□ 0.42
XRCC3-218ENST00000557439 IFNL1Q8IU54 200 aa17.66■□□□□ 0.42
XRCC3-218ENST00000557439 PHYKPLQ8IUZ5 450 aa17.66■□□□□ 0.42
XRCC3-218ENST00000557439 LGI2Q8N0V4 545 aa17.66■□□□□ 0.42
XRCC3-218ENST00000557439 UROC1Q96N76 676 aa17.66■□□□□ 0.42
XRCC3-218ENST00000557439 MRPS26Q9BYN8 205 aaKnown RBP17.66■□□□□ 0.42
XRCC3-218ENST00000557439 GPR62Q9BZJ7 368 aa17.66■□□□□ 0.42
XRCC3-218ENST00000557439 RBM38Q9H0Z9 239 aaKnown RBP17.66■□□□□ 0.42
XRCC3-218ENST00000557439 ASB1Q9Y576 335 aa17.66■□□□□ 0.42
XRCC3-218ENST00000557439 HEMK1Q9Y5R4 338 aaPredicted RBP17.66■□□□□ 0.42
XRCC3-218ENST00000557439 FXYD1O00168 92 aa17.66■□□□□ 0.42
XRCC3-218ENST00000557439 KPNA6O60684 536 aa17.66■□□□□ 0.42
XRCC3-218ENST00000557439 RPP40O75818 363 aaKnown RBP17.66■□□□□ 0.42
XRCC3-218ENST00000557439 RHOBTB1O94844 696 aa17.66■□□□□ 0.42
XRCC3-218ENST00000557439 OAZ2O95190 189 aa17.66■□□□□ 0.42
XRCC3-218ENST00000557439 MT-ND1P03886 318 aa17.66■□□□□ 0.42
XRCC3-218ENST00000557439 GNAO1P09471 354 aa17.66■□□□□ 0.42
XRCC3-218ENST00000557439 OXTRP30559 389 aa17.66■□□□□ 0.42
XRCC3-218ENST00000557439 FLT3LGP49771 235 aa17.66■□□□□ 0.42
XRCC3-218ENST00000557439 GALNT1Q10472 559 aaPredicted RBP17.66■□□□□ 0.42
XRCC3-218ENST00000557439 MBTPS1Q14703 1052 aa17.66■□□□□ 0.42
XRCC3-218ENST00000557439 SLC15A3Q8IY34 581 aa17.66■□□□□ 0.42
XRCC3-218ENST00000557439 COLGALT2Q8IYK4 626 aa17.66■□□□□ 0.42
XRCC3-218ENST00000557439 DCP1BQ8IZD4 617 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms