RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 CPNE8Q86YQ8 564 aa14.13□□□□□ -0.15
SNX6-210ENST00000557341 ZDHHC1Q8WTX9 485 aa14.13□□□□□ -0.15
SNX6-210ENST00000557341 TMEM159Q96B96 161 aa14.13□□□□□ -0.15
SNX6-210ENST00000557341 FAF2Q96CS3 445 aa14.13□□□□□ -0.15
SNX6-210ENST00000557341 AP2M1Q96CW1 435 aa14.13□□□□□ -0.15
SNX6-210ENST00000557341 HDAC11Q96DB2 347 aa14.13□□□□□ -0.15
SNX6-210ENST00000557341 TSGA13Q96PP4 275 aa14.13□□□□□ -0.15
SNX6-210ENST00000557341 TAAR2Q9P1P5 351 aa14.13□□□□□ -0.15
SNX6-210ENST00000557341 CD84Q9UIB8 345 aa14.13□□□□□ -0.15
SNX6-210ENST00000557341 ATXN7L1Q9ULK2 861 aaPredicted RBP14.13□□□□□ -0.15
SNX6-210ENST00000557341 SLC17A4Q9Y2C5 497 aa14.13□□□□□ -0.15
SNX6-210ENST00000557341 SSUH2Q9Y2M2 353 aa14.13□□□□□ -0.15
SNX6-210ENST00000557341 LOXL2Q9Y4K0 774 aa14.13□□□□□ -0.15
SNX6-210ENST00000557341 PCDHGA7Q9Y5G6 932 aa14.13□□□□□ -0.15
SNX6-210ENST00000557341 COL6A6A6NMZ7 2263 aa14.13□□□□□ -0.15
SNX6-210ENST00000557341 AHCTF1Q8WYP5 2266 aa14.12□□□□□ -0.15
SNX6-210ENST00000557341 ZW10O43264 779 aa14.12□□□□□ -0.15
SNX6-210ENST00000557341 SOD1P00441 154 aa14.12□□□□□ -0.15
SNX6-210ENST00000557341 HGFP14210 728 aa14.12□□□□□ -0.15
SNX6-210ENST00000557341 AK4P27144 223 aaPredicted RBP14.12□□□□□ -0.15
SNX6-210ENST00000557341 MAZP56270 477 aaKnown RBP14.12□□□□□ -0.15
SNX6-210ENST00000557341 TAS2R40P59535 323 aa14.12□□□□□ -0.15
SNX6-210ENST00000557341 GBE1Q04446 702 aa14.12□□□□□ -0.15
SNX6-210ENST00000557341 CLN3Q13286 438 aa14.12□□□□□ -0.15
SNX6-210ENST00000557341 DOK6Q6PKX4 331 aa14.12□□□□□ -0.15
SNX6-210ENST00000557341 SLC30A9Q6PML9 568 aa14.12□□□□□ -0.15
SNX6-210ENST00000557341 ADAMTSL4Q6UY14 1074 aa14.12□□□□□ -0.15
SNX6-210ENST00000557341 ZNF765Q7L2R6 523 aa14.12□□□□□ -0.15
SNX6-210ENST00000557341 ZNF438Q7Z4V0 828 aa14.12□□□□□ -0.15
SNX6-210ENST00000557341 C17orf82Q86X59 251 aaPredicted RBP14.12□□□□□ -0.15
SNX6-210ENST00000557341 NRROSQ86YC3 692 aa14.12□□□□□ -0.15
SNX6-210ENST00000557341 JAMLQ86YT9 394 aa14.12□□□□□ -0.15
SNX6-210ENST00000557341 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.12□□□□□ -0.15
SNX6-210ENST00000557341 SNRNP27Q8WVK2 155 aaKnown RBP14.12□□□□□ -0.15
SNX6-210ENST00000557341 ZNF830Q96NB3 372 aaPredicted RBP14.12□□□□□ -0.15
SNX6-210ENST00000557341 PACSIN1Q9BY11 444 aa14.12□□□□□ -0.15
SNX6-210ENST00000557341 SPATS2LQ9NUQ6 558 aaKnown RBP14.12□□□□□ -0.15
SNX6-210ENST00000557341 RBM22Q9NW64 420 aaKnown RBP eCLIP14.12□□□□□ -0.156e-10■■□□□ 12.5
SNX6-210ENST00000557341 PISDQ9UG56 409 aa14.12□□□□□ -0.15
SNX6-210ENST00000557341 A0A0U1RQS6 177 aa14.11□□□□□ -0.15
SNX6-210ENST00000557341 SSU72P8A0A1W2PR75 194 aa14.11□□□□□ -0.15
SNX6-210ENST00000557341 RHPN2P1A8MT19 583 aa14.11□□□□□ -0.15
SNX6-210ENST00000557341 CBFA2T2O43439 604 aa14.11□□□□□ -0.15
SNX6-210ENST00000557341 C1QL1O75973 258 aa14.11□□□□□ -0.15
SNX6-210ENST00000557341 CPNE6O95741 557 aa14.11□□□□□ -0.15
SNX6-210ENST00000557341 FUCA1P04066 466 aa14.11□□□□□ -0.15
SNX6-210ENST00000557341 FGF1P05230 155 aa14.11□□□□□ -0.15
SNX6-210ENST00000557341 HLA-DQB2P05538 268 aa14.11□□□□□ -0.15
SNX6-210ENST00000557341 SLC5A2P31639 672 aa14.11□□□□□ -0.15
SNX6-210ENST00000557341 ADCY8P40145 1251 aa14.11□□□□□ -0.15
SNX6-210ENST00000557341 STC1P52823 247 aa14.11□□□□□ -0.15
SNX6-210ENST00000557341 RPL26P61254 145 aaKnown RBP14.11□□□□□ -0.15
SNX6-210ENST00000557341 CTBSQ01459 385 aa14.11□□□□□ -0.15
SNX6-210ENST00000557341 ZFP36L1Q07352 338 aaKnown RBP14.11□□□□□ -0.15
SNX6-210ENST00000557341 BIRC2Q13490 618 aa14.11□□□□□ -0.15
SNX6-210ENST00000557341 NR1D2Q14995 579 aa14.11□□□□□ -0.15
SNX6-210ENST00000557341 TAF1BQ53T94 588 aaPredicted RBP14.11□□□□□ -0.15
SNX6-210ENST00000557341 PHF19Q5T6S3 580 aa14.11□□□□□ -0.15
SNX6-210ENST00000557341 CCDC81Q6ZN84 652 aa14.11□□□□□ -0.15
SNX6-210ENST00000557341 SLITRK4Q8IW52 837 aa14.11□□□□□ -0.15
SNX6-210ENST00000557341 RAVER1Q8IY67 606 aaKnown RBP14.11□□□□□ -0.15
SNX6-210ENST00000557341 CCNYQ8ND76 341 aa14.11□□□□□ -0.15
SNX6-210ENST00000557341 LPCAT1Q8NF37 534 aa14.11□□□□□ -0.15
SNX6-210ENST00000557341 PTCD2Q8WV60 388 aaKnown RBP14.11□□□□□ -0.15
SNX6-210ENST00000557341 SMIM14Q96QK8 99 aa14.11□□□□□ -0.15
SNX6-210ENST00000557341 OR2M4Q96R27 311 aa14.11□□□□□ -0.15
SNX6-210ENST00000557341 DNAJC7Q99615 494 aa14.11□□□□□ -0.15
SNX6-210ENST00000557341 CMKLR1Q99788 373 aa14.11□□□□□ -0.15
SNX6-210ENST00000557341 ABCG8Q9H221 673 aa14.11□□□□□ -0.15
SNX6-210ENST00000557341 PCDH9Q9HC56 1237 aa14.11□□□□□ -0.15
SNX6-210ENST00000557341 ZNHIT6Q9NWK9 470 aaKnown RBP14.11□□□□□ -0.15
SNX6-210ENST00000557341 ACSL6Q9UKU0 697 aa14.11□□□□□ -0.15
SNX6-210ENST00000557341 RPL26L1Q9UNX3 145 aaKnown RBP14.11□□□□□ -0.15
SNX6-210ENST00000557341 CHKBQ9Y259 395 aa14.11□□□□□ -0.15
SNX6-210ENST00000557341 PIEZO2Q9H5I5 2752 aa14.11□□□□□ -0.15
SNX6-210ENST00000557341 BOD1L1Q8NFC6 3051 aa14.1□□□□□ -0.15
SNX6-210ENST00000557341 K7ENP7 123 aa14.1□□□□□ -0.15
SNX6-210ENST00000557341 AKR1B10O60218 316 aa14.1□□□□□ -0.15
SNX6-210ENST00000557341 ECEL1O95672 775 aa14.1□□□□□ -0.15
SNX6-210ENST00000557341 TPM1P09493 284 aa14.1□□□□□ -0.15
SNX6-210ENST00000557341 TMEM253P0C7T8 217 aa14.1□□□□□ -0.15
SNX6-210ENST00000557341 ACTR1BP42025 376 aa14.1□□□□□ -0.15
SNX6-210ENST00000557341 POLD2P49005 469 aa14.1□□□□□ -0.15
SNX6-210ENST00000557341 ACTR1AP61163 376 aa14.1□□□□□ -0.15
SNX6-210ENST00000557341 B4GALNT1Q00973 533 aa14.1□□□□□ -0.15
SNX6-210ENST00000557341 PTSQ03393 145 aa14.1□□□□□ -0.15
SNX6-210ENST00000557341 IHHQ14623 411 aa14.1□□□□□ -0.15
SNX6-210ENST00000557341 MESDQ14696 234 aa14.1□□□□□ -0.15
SNX6-210ENST00000557341 CLPPQ16740 277 aaPredicted RBP14.1□□□□□ -0.15
SNX6-210ENST00000557341 INO80CQ6PI98 192 aaPredicted RBP14.1□□□□□ -0.15
SNX6-210ENST00000557341 PCSK4Q6UW60 755 aa14.1□□□□□ -0.15
SNX6-210ENST00000557341 RFLNAQ6ZTI6 216 aa14.1□□□□□ -0.15
SNX6-210ENST00000557341 TRIM74Q86UV6 250 aa14.1□□□□□ -0.15
SNX6-210ENST00000557341 PIM3Q86V86 326 aa14.1□□□□□ -0.15
SNX6-210ENST00000557341 NLRP8Q86W28 1048 aa14.1□□□□□ -0.15
SNX6-210ENST00000557341 GALNT13Q8IUC8 556 aa14.1□□□□□ -0.15
SNX6-210ENST00000557341 CCDC13Q8IYE1 715 aa14.1□□□□□ -0.15
SNX6-210ENST00000557341 NRSN1Q8IZ57 195 aa14.1□□□□□ -0.15
SNX6-210ENST00000557341 NAGSQ8N159 534 aa14.1□□□□□ -0.15
SNX6-210ENST00000557341 PQLC3Q8N755 202 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms