RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 HEPHQ9BQS7 1158 aa12.77□□□□□ -0.37
PSEN1-219ENST00000556951 C2orf49Q9BVC5 232 aaPredicted RBP12.77□□□□□ -0.37
PSEN1-219ENST00000556951 AP1M1Q9BXS5 423 aa12.77□□□□□ -0.37
PSEN1-219ENST00000556951 OSBPL8Q9BZF1 889 aa12.77□□□□□ -0.37
PSEN1-219ENST00000556951 SIK2Q9H0K1 926 aa12.77□□□□□ -0.37
PSEN1-219ENST00000556951 LRRN3Q9H3W5 708 aa12.77□□□□□ -0.37
PSEN1-219ENST00000556951 SYNDIG1Q9H7V2 258 aa12.77□□□□□ -0.37
PSEN1-219ENST00000556951 FAM204AQ9H8W3 233 aa12.77□□□□□ -0.37
PSEN1-219ENST00000556951 MBNL1Q9NR56 388 aaKnown RBP12.77□□□□□ -0.37
PSEN1-219ENST00000556951 ZNF212Q9UDV6 495 aa12.77□□□□□ -0.37
PSEN1-219ENST00000556951 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.77□□□□□ -0.37
PSEN1-219ENST00000556951 ITM2BQ9Y287 266 aa12.77□□□□□ -0.37
PSEN1-219ENST00000556951 EFR3BQ9Y2G0 817 aa12.77□□□□□ -0.37
PSEN1-219ENST00000556951 ACTL7AQ9Y615 435 aa12.77□□□□□ -0.37
PSEN1-219ENST00000556951 V9GYY5 206 aaPredicted RBP12.77□□□□□ -0.37
PSEN1-219ENST00000556951 RP1L1Q8IWN7 2480 aaPredicted RBP12.77□□□□□ -0.37
PSEN1-219ENST00000556951 ANKHD1Q8IWZ3 2542 aaKnown RBP12.77□□□□□ -0.37
PSEN1-219ENST00000556951 UNC13CQ8NB66 2214 aa12.76□□□□□ -0.37
PSEN1-219ENST00000556951 LRRD1A4D1F6 860 aa12.76□□□□□ -0.37
PSEN1-219ENST00000556951 C3orf70A6NLC5 250 aaPredicted RBP12.76□□□□□ -0.37
PSEN1-219ENST00000556951 TMX2-CTNND1H3BSU7 103 aa12.76□□□□□ -0.37
PSEN1-219ENST00000556951 M0QYT0 321 aa12.76□□□□□ -0.37
PSEN1-219ENST00000556951 TSPAN6O43657 245 aa12.76□□□□□ -0.37
PSEN1-219ENST00000556951 TJP3O95049 919 aa12.76□□□□□ -0.37
PSEN1-219ENST00000556951 RPLP0P05388 317 aaKnown RBP12.76□□□□□ -0.37
PSEN1-219ENST00000556951 TUBBP07437 444 aa12.76□□□□□ -0.37
PSEN1-219ENST00000556951 RHOCP08134 193 aa12.76□□□□□ -0.37
PSEN1-219ENST00000556951 TFE3P19532 575 aaPredicted RBP12.76□□□□□ -0.37
PSEN1-219ENST00000556951 GKP32189 559 aa12.76□□□□□ -0.37
PSEN1-219ENST00000556951 DEUP1Q05D60 604 aa12.76□□□□□ -0.37
PSEN1-219ENST00000556951 NAA30Q147X3 362 aaPredicted RBP12.76□□□□□ -0.37
PSEN1-219ENST00000556951 PDK2Q15119 407 aa12.76□□□□□ -0.37
PSEN1-219ENST00000556951 TAZQ16635 292 aa12.76□□□□□ -0.37
PSEN1-219ENST00000556951 RAB6CQ53S08 254 aa12.76□□□□□ -0.37
PSEN1-219ENST00000556951 CARD16Q5EG05 197 aa12.76□□□□□ -0.37
PSEN1-219ENST00000556951 ERMARDQ5T6L9 678 aa12.76□□□□□ -0.37
PSEN1-219ENST00000556951 FAXCQ5TGI0 409 aa12.76□□□□□ -0.37
PSEN1-219ENST00000556951 MFSD7Q6UXD7 560 aa12.76□□□□□ -0.37
PSEN1-219ENST00000556951 CYP4V2Q6ZWL3 525 aaPredicted RBP12.76□□□□□ -0.37
PSEN1-219ENST00000556951 SETD3Q86TU7 594 aaPredicted RBP12.76□□□□□ -0.37
PSEN1-219ENST00000556951 HSPH1Q92598 858 aa12.76□□□□□ -0.37
PSEN1-219ENST00000556951 USP7Q93009 1102 aa12.76□□□□□ -0.37
PSEN1-219ENST00000556951 PGAP3Q96FM1 320 aaPredicted RBP12.76□□□□□ -0.37
PSEN1-219ENST00000556951 RUNDC3BQ96NL0 473 aa12.76□□□□□ -0.37
PSEN1-219ENST00000556951 PEBP4Q96S96 227 aa12.76□□□□□ -0.37
PSEN1-219ENST00000556951 CPEB1Q9BZB8 566 aaKnown RBP12.76□□□□□ -0.37
PSEN1-219ENST00000556951 STRADBQ9C0K7 418 aa12.76□□□□□ -0.37
PSEN1-219ENST00000556951 RAB6CQ9H0N0 254 aa12.76□□□□□ -0.37
PSEN1-219ENST00000556951 HOMER3Q9NSC5 361 aa12.76□□□□□ -0.37
PSEN1-219ENST00000556951 CUEDC1Q9NWM3 386 aaPredicted RBP12.76□□□□□ -0.37
PSEN1-219ENST00000556951 LOXL2Q9Y4K0 774 aa12.76□□□□□ -0.37
PSEN1-219ENST00000556951 C16orf96A6NNT2 1141 aa12.75□□□□□ -0.37
PSEN1-219ENST00000556951 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.75□□□□□ -0.37
PSEN1-219ENST00000556951 AGRPO00253 132 aa12.75□□□□□ -0.37
PSEN1-219ENST00000556951 AREL1O15033 823 aa12.75□□□□□ -0.37
PSEN1-219ENST00000556951 JMJD7P0C870 316 aa12.75□□□□□ -0.37
PSEN1-219ENST00000556951 ITIH2P19823 946 aa12.75□□□□□ -0.37
PSEN1-219ENST00000556951 CDKN2BP42772 138 aa12.75□□□□□ -0.37
PSEN1-219ENST00000556951 ARSDP51689 593 aa12.75□□□□□ -0.37
PSEN1-219ENST00000556951 ARSEP51690 589 aa12.75□□□□□ -0.37
PSEN1-219ENST00000556951 CCNHP51946 323 aaPredicted RBP12.75□□□□□ -0.37
PSEN1-219ENST00000556951 AIF1P55008 147 aa12.75□□□□□ -0.37
PSEN1-219ENST00000556951 YPEL5P62699 121 aa12.75□□□□□ -0.37
PSEN1-219ENST00000556951 PTK2BQ14289 1009 aa12.75□□□□□ -0.37
PSEN1-219ENST00000556951 CYP1B1Q16678 543 aa12.75□□□□□ -0.37
PSEN1-219ENST00000556951 SMTNL2Q2TAL5 461 aa12.75□□□□□ -0.37
PSEN1-219ENST00000556951 TFDP3Q5H9I0 405 aa12.75□□□□□ -0.37
PSEN1-219ENST00000556951 KCTD16Q68DU8 428 aa12.75□□□□□ -0.37
PSEN1-219ENST00000556951 LVRNQ6Q4G3 990 aa12.75□□□□□ -0.37
PSEN1-219ENST00000556951 VSIG1Q86XK7 387 aa12.75□□□□□ -0.37
PSEN1-219ENST00000556951 SFTPA2Q8IWL1 248 aa12.75□□□□□ -0.37
PSEN1-219ENST00000556951 KLHL7Q8IXQ5 586 aa12.75□□□□□ -0.37
PSEN1-219ENST00000556951 ARL10Q8N8L6 244 aa12.75□□□□□ -0.37
PSEN1-219ENST00000556951 FAM71BQ8TC56 605 aa12.75□□□□□ -0.37
PSEN1-219ENST00000556951 TMEM74Q96NL1 305 aa12.75□□□□□ -0.37
PSEN1-219ENST00000556951 KRT12Q99456 494 aa12.75□□□□□ -0.37
PSEN1-219ENST00000556951 HEMGNQ9BXL5 484 aa12.75□□□□□ -0.37
PSEN1-219ENST00000556951 SLC13A1Q9BZW2 595 aa12.75□□□□□ -0.37
PSEN1-219ENST00000556951 PIGVQ9NUD9 493 aa12.75□□□□□ -0.37
PSEN1-219ENST00000556951 ARHGEF38Q9NXL2 777 aa12.75□□□□□ -0.37
PSEN1-219ENST00000556951 MPP6Q9NZW5 540 aa12.75□□□□□ -0.37
PSEN1-219ENST00000556951 SEPT10Q9P0V9 454 aa12.75□□□□□ -0.37
PSEN1-219ENST00000556951 SIRPGQ9P1W8 387 aa12.75□□□□□ -0.37
PSEN1-219ENST00000556951 SDK2Q58EX2 2172 aa12.74□□□□□ -0.37
PSEN1-219ENST00000556951 IGLV3-10A0A075B6K4 115 aa12.74□□□□□ -0.37
PSEN1-219ENST00000556951 hCG_1818297A0A087WSY0 165 aa12.74□□□□□ -0.37
PSEN1-219ENST00000556951 TCRBV7S2A1N4TA0A589 114 aa12.74□□□□□ -0.37
PSEN1-219ENST00000556951 ZNF487B1APH4 448 aa12.74□□□□□ -0.37
PSEN1-219ENST00000556951 PHF2O75151 1096 aa12.74□□□□□ -0.37
PSEN1-219ENST00000556951 CLDN1O95832 211 aa12.74□□□□□ -0.37
PSEN1-219ENST00000556951 RHOXF2BP0C7M4 288 aa12.74□□□□□ -0.37
PSEN1-219ENST00000556951 RECQLP46063 649 aaPredicted RBP12.74□□□□□ -0.37
PSEN1-219ENST00000556951 CXCR3P49682 368 aa12.74□□□□□ -0.37
PSEN1-219ENST00000556951 THOP1P52888 689 aa12.74□□□□□ -0.37
PSEN1-219ENST00000556951 ARF5P84085 180 aa12.74□□□□□ -0.37
PSEN1-219ENST00000556951 PPARDQ03181 441 aa12.74□□□□□ -0.37
PSEN1-219ENST00000556951 SLC20A2Q08357 652 aa12.74□□□□□ -0.37
PSEN1-219ENST00000556951 NME3Q13232 169 aa12.74□□□□□ -0.37
PSEN1-219ENST00000556951 KLF1Q13351 362 aaPredicted RBP12.74□□□□□ -0.37
PSEN1-219ENST00000556951 KRT81Q14533 505 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms