RNA–Protein interactions for RNA: ENST00000556680.1

TRAV15-201, Transcript of T cell receptor alpha variable 15 (pseudogene), humanhuman

BASIC

Gene TRAV15, Length 249 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV15-201ENST00000556680 BLOC1S2Q6QNY1 142 aa4.37□□□□□ -1.71
TRAV15-201ENST00000556680 OLFM4Q6UX06 510 aa4.37□□□□□ -1.71
TRAV15-201ENST00000556680 FASTKD5Q7L8L6 764 aaKnown RBP4.37□□□□□ -1.71
TRAV15-201ENST00000556680 GSTA5Q7RTV2 222 aa4.37□□□□□ -1.71
TRAV15-201ENST00000556680 SERPINA11Q86U17 422 aa4.37□□□□□ -1.71
TRAV15-201ENST00000556680 ANKRD13BQ86YJ7 626 aa4.37□□□□□ -1.71
TRAV15-201ENST00000556680 FAM217AQ8IXS0 508 aa4.37□□□□□ -1.71
TRAV15-201ENST00000556680 LRRC57Q8N9N7 239 aa4.37□□□□□ -1.71
TRAV15-201ENST00000556680 MIGA1Q8NAN2 632 aa4.37□□□□□ -1.71
TRAV15-201ENST00000556680 CADM4Q8NFZ8 388 aa4.37□□□□□ -1.71
TRAV15-201ENST00000556680 TMEM170AQ8WVE7 144 aa4.37□□□□□ -1.71
TRAV15-201ENST00000556680 EME1Q96AY2 570 aa4.37□□□□□ -1.71
TRAV15-201ENST00000556680 FAM84BQ96KN1 310 aaPredicted RBP4.37□□□□□ -1.71
TRAV15-201ENST00000556680 NUF2Q9BZD4 464 aa4.37□□□□□ -1.71
TRAV15-201ENST00000556680 NAPBQ9H115 298 aa4.37□□□□□ -1.71
TRAV15-201ENST00000556680 PNRC2Q9NPJ4 139 aaKnown RBP4.37□□□□□ -1.71
TRAV15-201ENST00000556680 THSD1Q9NS62 852 aa4.37□□□□□ -1.71
TRAV15-201ENST00000556680 SEPT11Q9NVA2 429 aaKnown RBP4.37□□□□□ -1.71
TRAV15-201ENST00000556680 HAUS2Q9NVX0 235 aa4.37□□□□□ -1.71
TRAV15-201ENST00000556680 EHD2Q9NZN4 543 aa4.37□□□□□ -1.71
TRAV15-201ENST00000556680 LIMA1Q9UHB6 759 aaKnown RBP4.37□□□□□ -1.71
TRAV15-201ENST00000556680 A4GNTQ9UNA3 340 aa4.37□□□□□ -1.71
TRAV15-201ENST00000556680 KCNE2Q9Y6J6 123 aa4.37□□□□□ -1.71
TRAV15-201ENST00000556680 RBBP6Q7Z6E9 1792 aaKnown RBP4.37□□□□□ -1.71
TRAV15-201ENST00000556680 A0A1W2PQM1 296 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 K7ENM7 598 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 GTPBP1O00178 669 aaKnown RBP4.36□□□□□ -1.71
TRAV15-201ENST00000556680 TGFB1I1O43294 461 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 HSPD1P10809 573 aaKnown RBP4.36□□□□□ -1.71
TRAV15-201ENST00000556680 PCNAP12004 261 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 UNGP13051 313 aaPredicted RBP4.36□□□□□ -1.71
TRAV15-201ENST00000556680 LAMP2P13473 410 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 PTPN2P17706 415 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 ICAM3P32942 547 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 GPR12P47775 334 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 TMPRSS3P57727 454 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 DYNLL1P63167 89 aaKnown RBP4.36□□□□□ -1.71
TRAV15-201ENST00000556680 GSTO1P78417 241 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 SRSF4Q08170 494 aaKnown RBP4.36□□□□□ -1.71
TRAV15-201ENST00000556680 TRDNQ13061 729 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 MED22Q15528 200 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 SMTNL2Q2TAL5 461 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 SUPT20HL1Q3ZLR7 823 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 PIK3CD-AS1Q5SR53 167 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 FAM205BPQ63HN1 556 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 NCAPH2Q6IBW4 605 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 CES5AQ6NT32 575 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 FAM83HQ6ZRV2 1179 aaPredicted RBP4.36□□□□□ -1.71
TRAV15-201ENST00000556680 IKBIPQ70UQ0 350 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 KDELC2Q7Z4H8 507 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 TBC1D26Q86UD7 250 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 TRIM74Q86UV6 250 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 TRIM73Q86UV7 250 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 CAMK1DQ8IU85 385 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 KIAA2013Q8IYS2 634 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 HORMAD2Q8N7B1 307 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 ZMIZ2Q8NF64 920 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 TBC1D16Q8TBP0 767 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 USP6NLQ92738 828 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 SNX21Q969T3 373 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 ZNF333Q96JL9 665 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 TCEANC2Q96MN5 208 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 WDR83Q9BRX9 315 aaKnown RBP4.36□□□□□ -1.71
TRAV15-201ENST00000556680 NACAP1Q9BZK3 213 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 FTOQ9C0B1 505 aaKnown RBP eCLIP4.36□□□□□ -1.71
TRAV15-201ENST00000556680 BRF2Q9HAW0 419 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 SPAG4Q9NPE6 437 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 NRIP3Q9NQ35 241 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 RNF146Q9NTX7 359 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 PDRG1Q9NUG6 133 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 CTNNA3Q9UI47 895 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 FAM96BQ9Y3D0 163 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 ATP6V0A2Q9Y487 856 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 LYVE1Q9Y5Y7 322 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 DOCK1Q14185 1865 aa4.36□□□□□ -1.71
TRAV15-201ENST00000556680 BAZ2BQ9UIF8 2168 aaKnown RBP4.36□□□□□ -1.71
TRAV15-201ENST00000556680 A0A0G2JLW4 131 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 FAM237BA0A1B0GVD1 139 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 WIPF3A6NGB9 483 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 E7EWF7 191 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 HSPB6O14558 160 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 PPIP5K2O43314 1243 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 ECE2O60344 883 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 TLR2O60603 784 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 ZC3H11AO75152 810 aaKnown RBP eCLIP4.35□□□□□ -1.71
TRAV15-201ENST00000556680 PTP4A3O75365 173 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 RBMXL2O75526 392 aaKnown RBP4.35□□□□□ -1.71
TRAV15-201ENST00000556680 SEC31AO94979 1220 aaKnown RBP4.35□□□□□ -1.71
TRAV15-201ENST00000556680 HEXAP06865 529 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 DPEP1P16444 411 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 KELP23276 732 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 HOXD9P28356 352 aaPredicted RBP4.35□□□□□ -1.71
TRAV15-201ENST00000556680 PTGER1P34995 402 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 PPARGP37231 505 aaPredicted RBP4.35□□□□□ -1.71
TRAV15-201ENST00000556680 MLH1P40692 756 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 OLR1P78380 273 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 MECOMQ03112 1051 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 NECTIN1Q15223 517 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 SRSF7Q16629 238 aaKnown RBP eCLIP4.35□□□□□ -1.71
TRAV15-201ENST00000556680 KRTAP15-1Q3LI76 137 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms