RNA–Protein interactions for RNA: ENST00000556523.1

SDR39U1-219, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-219ENST00000556523 CSTF2P33240 577 aaKnown RBP eCLIP17.58■□□□□ 0.4
SDR39U1-219ENST00000556523 CSRP3P50461 194 aa17.58■□□□□ 0.4
SDR39U1-219ENST00000556523 TBR1Q16650 682 aa17.58■□□□□ 0.4
SDR39U1-219ENST00000556523 BOLA3Q53S33 107 aa17.58■□□□□ 0.4
SDR39U1-219ENST00000556523 MARC1Q5VT66 337 aa17.58■□□□□ 0.4
SDR39U1-219ENST00000556523 ZNF571Q7Z3V5 609 aaPredicted RBP17.58■□□□□ 0.4
SDR39U1-219ENST00000556523 TSPAN33Q86UF1 283 aa17.58■□□□□ 0.4
SDR39U1-219ENST00000556523 PGBD5Q8N414 524 aa17.58■□□□□ 0.4
SDR39U1-219ENST00000556523 AGBL5Q8NDL9 886 aa17.58■□□□□ 0.4
SDR39U1-219ENST00000556523 OR4D9Q8NGE8 314 aa17.58■□□□□ 0.4
SDR39U1-219ENST00000556523 SCRN2Q96FV2 425 aa17.58■□□□□ 0.4
SDR39U1-219ENST00000556523 CSPG4P5Q96PW8 444 aa17.58■□□□□ 0.4
SDR39U1-219ENST00000556523 TAAR9Q96RI9 348 aa17.58■□□□□ 0.4
SDR39U1-219ENST00000556523 MCCC1Q96RQ3 725 aaPredicted RBP17.58■□□□□ 0.4
SDR39U1-219ENST00000556523 HSD3B7Q9H2F3 369 aa17.58■□□□□ 0.4
SDR39U1-219ENST00000556523 STARD5Q9NSY2 213 aa17.58■□□□□ 0.4
SDR39U1-219ENST00000556523 ETNK2Q9NVF9 386 aa17.58■□□□□ 0.4
SDR39U1-219ENST00000556523 KCNK4Q9NYG8 393 aa17.58■□□□□ 0.4
SDR39U1-219ENST00000556523 SDK2Q58EX2 2172 aa17.57■□□□□ 0.4
SDR39U1-219ENST00000556523 TLN1Q9Y490 2541 aaKnown RBP17.57■□□□□ 0.4
SDR39U1-219ENST00000556523 ARHGAP6O43182 974 aa17.57■□□□□ 0.4
SDR39U1-219ENST00000556523 MAFKO60675 156 aa17.57■□□□□ 0.4
SDR39U1-219ENST00000556523 PEX11BO96011 259 aa17.57■□□□□ 0.4
SDR39U1-219ENST00000556523 CTPS1P17812 591 aa17.57■□□□□ 0.4
SDR39U1-219ENST00000556523 IL1R2P27930 398 aa17.57■□□□□ 0.4
SDR39U1-219ENST00000556523 CD1CP29017 333 aa17.57■□□□□ 0.4
SDR39U1-219ENST00000556523 POLD2P49005 469 aa17.57■□□□□ 0.4
SDR39U1-219ENST00000556523 LIMK2P53671 638 aa17.57■□□□□ 0.4
SDR39U1-219ENST00000556523 NFKB2Q00653 900 aa17.57■□□□□ 0.4
SDR39U1-219ENST00000556523 POLNQ7Z5Q5 900 aa17.57■□□□□ 0.4
SDR39U1-219ENST00000556523 NAGSQ8N159 534 aa17.57■□□□□ 0.4
SDR39U1-219ENST00000556523 IL22RA1Q8N6P7 574 aa17.57■□□□□ 0.4
SDR39U1-219ENST00000556523 AP2M1Q96CW1 435 aa17.57■□□□□ 0.4
SDR39U1-219ENST00000556523 TSPY26PQ9H489 355 aa17.57■□□□□ 0.4
SDR39U1-219ENST00000556523 CBX8Q9HC52 389 aa17.57■□□□□ 0.4
SDR39U1-219ENST00000556523 NT5MQ9NPB1 228 aa17.57■□□□□ 0.4
SDR39U1-219ENST00000556523 RTN4Q9NQC3 1192 aaKnown RBP17.57■□□□□ 0.4
SDR39U1-219ENST00000556523 PCDHGA3Q9Y5H0 932 aa17.57■□□□□ 0.4
SDR39U1-219ENST00000556523 IGHV1OR21-1A0A087WYE8 117 aa17.56■□□□□ 0.4
SDR39U1-219ENST00000556523 DDX3XO00571 662 aaKnown RBP eCLIP17.56■□□□□ 0.42e-8■■■■■ 37.8
SDR39U1-219ENST00000556523 FUCA1P04066 466 aa17.56■□□□□ 0.4
SDR39U1-219ENST00000556523 PYGLP06737 847 aa17.56■□□□□ 0.4
SDR39U1-219ENST00000556523 WT1P19544 449 aaPredicted RBP17.56■□□□□ 0.4
SDR39U1-219ENST00000556523 PRKCIP41743 596 aa17.56■□□□□ 0.4
SDR39U1-219ENST00000556523 EPHB1P54762 984 aa17.56■□□□□ 0.4
SDR39U1-219ENST00000556523 CYP4F2P78329 520 aa17.56■□□□□ 0.4
SDR39U1-219ENST00000556523 DPTQ07507 201 aa17.56■□□□□ 0.4
SDR39U1-219ENST00000556523 ITKQ08881 620 aa17.56■□□□□ 0.4
SDR39U1-219ENST00000556523 KRT81Q14533 505 aa17.56■□□□□ 0.4
SDR39U1-219ENST00000556523 NKAIN2Q5VXU1 208 aa17.56■□□□□ 0.4
SDR39U1-219ENST00000556523 ADAMTSL4Q6UY14 1074 aa17.56■□□□□ 0.4
SDR39U1-219ENST00000556523 ZNF574Q6ZN55 896 aaPredicted RBP17.56■□□□□ 0.4
SDR39U1-219ENST00000556523 MARK2Q7KZI7 788 aaKnown RBP17.56■□□□□ 0.4
SDR39U1-219ENST00000556523 FAM129CQ86XR2 697 aa17.56■□□□□ 0.4
SDR39U1-219ENST00000556523 GALNT13Q8IUC8 556 aa17.56■□□□□ 0.4
SDR39U1-219ENST00000556523 PTCD2Q8WV60 388 aaKnown RBP17.56■□□□□ 0.4
SDR39U1-219ENST00000556523 HTR3CQ8WXA8 447 aa17.56■□□□□ 0.4
SDR39U1-219ENST00000556523 ART4Q93070 314 aa17.56■□□□□ 0.4
SDR39U1-219ENST00000556523 AHCYL2Q96HN2 611 aaKnown RBP17.56■□□□□ 0.4
SDR39U1-219ENST00000556523 HAUS2Q9NVX0 235 aa17.56■□□□□ 0.4
SDR39U1-219ENST00000556523 AIPL1Q9NZN9 384 aa17.56■□□□□ 0.4
SDR39U1-219ENST00000556523 CD84Q9UIB8 345 aa17.56■□□□□ 0.4
SDR39U1-219ENST00000556523 DNPEPQ9ULA0 475 aa17.56■□□□□ 0.4
SDR39U1-219ENST00000556523 RARAP10276 462 aa17.55■□□□□ 0.4
SDR39U1-219ENST00000556523 THRAP10827 490 aa17.55■□□□□ 0.4
SDR39U1-219ENST00000556523 FGF3P11487 239 aaPredicted RBP17.55■□□□□ 0.4
SDR39U1-219ENST00000556523 CSF2RBP32927 897 aa17.55■□□□□ 0.4
SDR39U1-219ENST00000556523 GPLD1P80108 840 aa17.55■□□□□ 0.4
SDR39U1-219ENST00000556523 LRP8Q14114 963 aa17.55■□□□□ 0.4
SDR39U1-219ENST00000556523 PIGHQ14442 188 aaPredicted RBP17.55■□□□□ 0.4
SDR39U1-219ENST00000556523 TDRD12Q587J7 1177 aaKnown RBP17.55■□□□□ 0.4
SDR39U1-219ENST00000556523 E4F1Q66K89 784 aaPredicted RBP17.55■□□□□ 0.4
SDR39U1-219ENST00000556523 LRRC66Q68CR7 880 aa17.55■□□□□ 0.4
SDR39U1-219ENST00000556523 TECPR1Q7Z6L1 1165 aa17.55■□□□□ 0.4
SDR39U1-219ENST00000556523 TRIM74Q86UV6 250 aa17.55■□□□□ 0.4
SDR39U1-219ENST00000556523 CBARPQ8N350 705 aaPredicted RBP17.55■□□□□ 0.4
SDR39U1-219ENST00000556523 OR10G6Q8NH81 332 aa17.55■□□□□ 0.4
SDR39U1-219ENST00000556523 TEKT4Q8WW24 435 aa17.55■□□□□ 0.4
SDR39U1-219ENST00000556523 SEMA3CQ99985 751 aa17.55■□□□□ 0.4
SDR39U1-219ENST00000556523 ANP32EQ9BTT0 268 aa17.55■□□□□ 0.4
SDR39U1-219ENST00000556523 DDA1Q9BW61 102 aa17.55■□□□□ 0.4
SDR39U1-219ENST00000556523 POLR1EQ9GZS1 481 aaKnown RBP17.55■□□□□ 0.4
SDR39U1-219ENST00000556523 ABCG8Q9H221 673 aa17.55■□□□□ 0.4
SDR39U1-219ENST00000556523 STN1Q9H668 368 aaKnown RBP17.55■□□□□ 0.4
SDR39U1-219ENST00000556523 PCDH18Q9HCL0 1135 aa17.55■□□□□ 0.4
SDR39U1-219ENST00000556523 SLC39A1Q9NY26 324 aa17.55■□□□□ 0.4
SDR39U1-219ENST00000556523 IL17BQ9UHF5 180 aa17.55■□□□□ 0.4
SDR39U1-219ENST00000556523 TMEM98Q9Y2Y6 226 aa17.55■□□□□ 0.4
SDR39U1-219ENST00000556523 PPM1DO15297 605 aa17.54■□□□□ 0.4
SDR39U1-219ENST00000556523 DUX1O43812 170 aa17.54■□□□□ 0.4
SDR39U1-219ENST00000556523 ASMTLO95671 621 aa17.54■□□□□ 0.4
SDR39U1-219ENST00000556523 TCF4P15884 667 aa17.54■□□□□ 0.4
SDR39U1-219ENST00000556523 ZNF30P17039 623 aa17.54■□□□□ 0.4
SDR39U1-219ENST00000556523 CA4P22748 312 aa17.54■□□□□ 0.4
SDR39U1-219ENST00000556523 MPSTP25325 297 aa17.54■□□□□ 0.4
SDR39U1-219ENST00000556523 RAB15P59190 212 aa17.54■□□□□ 0.4
SDR39U1-219ENST00000556523 TPM4P67936 248 aa17.54■□□□□ 0.4
SDR39U1-219ENST00000556523 PTPRRQ15256 657 aa17.54■□□□□ 0.4
SDR39U1-219ENST00000556523 BORAQ6PGQ7 559 aa17.54■□□□□ 0.4
SDR39U1-219ENST00000556523 ZNF765Q7L2R6 523 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms