RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 METAP1DQ6UB28 335 aaPredicted RBP6.2□□□□□ -1.42
TDP1-215ENST00000556498 IL27RAQ6UWB1 636 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 MIGA2Q7L4E1 593 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 COPS6Q7L5N1 327 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 TMCO2Q7Z6W1 182 aaPredicted RBP6.2□□□□□ -1.42
TDP1-215ENST00000556498 CROCCP2Q86T23 111 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 KBTBD6Q86V97 674 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 TRIM69Q86WT6 500 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 C2CD5Q86YS7 1000 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 CEP97Q8IW35 865 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 TIGD4Q8IY51 512 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 OXR1Q8N573 874 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 MYCT1Q8N699 235 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 EIF1ADQ8N9N8 165 aaKnown RBP6.2□□□□□ -1.42
TDP1-215ENST00000556498 SPATA4Q8NEY3 305 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 ZMIZ2Q8NF64 920 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 ADCY4Q8NFM4 1077 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 ACTRT2Q8TDY3 377 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 SLC20A1Q8WUM9 679 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 TRAPPC12Q8WVT3 735 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 OTUB2Q96DC9 234 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 SPACA9Q96E40 222 aaPredicted RBP6.2□□□□□ -1.42
TDP1-215ENST00000556498 TXNDC15Q96J42 360 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 ELMO2Q96JJ3 720 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 PBKQ96KB5 322 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 Q96M66 194 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 ZNF285Q96NJ3 590 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 QRFPRQ96P65 431 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 ZIM3Q96PE6 472 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 KRT12Q99456 494 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 CDC6Q99741 560 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 RBM4BQ9BQ04 359 aaKnown RBP6.2□□□□□ -1.42
TDP1-215ENST00000556498 ZNF251Q9BRH9 671 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 PELOQ9BRX2 385 aaKnown RBP6.2□□□□□ -1.42
TDP1-215ENST00000556498 FAM213AQ9BRX8 229 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 TUBB6Q9BUF5 446 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 RBM4Q9BWF3 364 aaKnown RBP6.2□□□□□ -1.42
TDP1-215ENST00000556498 ZNF518BQ9C0D4 1074 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 MKNK2Q9HBH9 465 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 USP29Q9HBJ7 922 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 PRDM8Q9NQV8 689 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 PCDHB16Q9NRJ7 776 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 RAB20Q9NX57 234 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 ZDHHC7Q9NXF8 308 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 GDE1Q9NZC3 331 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 MPP6Q9NZW5 540 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 IFT80Q9P2H3 777 aaPredicted RBP6.2□□□□□ -1.42
TDP1-215ENST00000556498 PI4KBQ9UBF8 816 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 SPASTQ9UBP0 616 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 POLLQ9UGP5 575 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 SUSD2Q9UGT4 822 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 ITGA11Q9UKX5 1188 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 CNOT11Q9UKZ1 510 aaKnown RBP6.2□□□□□ -1.42
TDP1-215ENST00000556498 PCDHGB4Q9UN71 923 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 PLCL2Q9UPR0 1127 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 HPSEQ9Y251 543 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 PPIL1Q9Y3C6 166 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 NAALAD2Q9Y3Q0 740 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 FKBP7Q9Y680 259 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 UMODL1Q5DID0 1318 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 FRMPD2Q68DX3 1309 aaPredicted RBP6.2□□□□□ -1.42
TDP1-215ENST00000556498 PNPLA6Q8IY17 1366 aa6.19□□□□□ -1.42
TDP1-215ENST00000556498 ERCC6L2Q5T890 1561 aa6.19□□□□□ -1.42
TDP1-215ENST00000556498 CASZ1Q86V15 1759 aa6.19□□□□□ -1.42
TDP1-215ENST00000556498 A0A087X0M5 115 aa6.19□□□□□ -1.42
TDP1-215ENST00000556498 A0A0B4J293 547 aa6.19□□□□□ -1.42
TDP1-215ENST00000556498 A0A1B0GX30 115 aa6.19□□□□□ -1.42
TDP1-215ENST00000556498 PRR33A8MZF0 331 aa6.19□□□□□ -1.42
TDP1-215ENST00000556498 PODXLO00592 558 aa6.19□□□□□ -1.42
TDP1-215ENST00000556498 DVL2O14641 736 aa6.19□□□□□ -1.42
TDP1-215ENST00000556498 ZNF197O14709 1029 aa6.19□□□□□ -1.42
TDP1-215ENST00000556498 B4GAT1O43505 415 aa6.19□□□□□ -1.42
TDP1-215ENST00000556498 UGDHO60701 494 aa6.19□□□□□ -1.42
TDP1-215ENST00000556498 TOM1O60784 492 aa6.19□□□□□ -1.42
TDP1-215ENST00000556498 PHF2O75151 1096 aa6.19□□□□□ -1.42
TDP1-215ENST00000556498 AHSA1O95433 338 aa6.19□□□□□ -1.42
TDP1-215ENST00000556498 ZBTB11O95625 1053 aaPredicted RBP6.19□□□□□ -1.42
TDP1-215ENST00000556498 CSTAP01040 98 aa6.19□□□□□ -1.42
TDP1-215ENST00000556498 IFNA4P05014 189 aa6.19□□□□□ -1.42
TDP1-215ENST00000556498 EPHX1P07099 455 aa6.19□□□□□ -1.42
TDP1-215ENST00000556498 ANXA5P08758 320 aa6.19□□□□□ -1.42
TDP1-215ENST00000556498 CNPP09543 421 aaKnown RBP6.19□□□□□ -1.42
TDP1-215ENST00000556498 ZNF888P0CJ79 500 aaPredicted RBP6.19□□□□□ -1.42
TDP1-215ENST00000556498 RALBP11234 206 aa6.19□□□□□ -1.42
TDP1-215ENST00000556498 ETS2P15036 469 aa6.19□□□□□ -1.42
TDP1-215ENST00000556498 TCF4P15884 667 aa6.19□□□□□ -1.42
TDP1-215ENST00000556498 DRD4P21917 467 aa6.19□□□□□ -1.42
TDP1-215ENST00000556498 CNTFP26441 200 aa6.19□□□□□ -1.42
TDP1-215ENST00000556498 CYP2C18P33260 490 aa6.19□□□□□ -1.42
TDP1-215ENST00000556498 PPP3CCP48454 512 aa6.19□□□□□ -1.42
TDP1-215ENST00000556498 ALDH7A1P49419 539 aaKnown RBP6.19□□□□□ -1.42
TDP1-215ENST00000556498 LIG4P49917 911 aa6.19□□□□□ -1.42
TDP1-215ENST00000556498 CCR9P51686 369 aa6.19□□□□□ -1.42
TDP1-215ENST00000556498 ZNF143P52747 638 aaPredicted RBP6.19□□□□□ -1.42
TDP1-215ENST00000556498 DGKQP52824 942 aa6.19□□□□□ -1.42
TDP1-215ENST00000556498 PLK1P53350 603 aa6.19□□□□□ -1.42
TDP1-215ENST00000556498 PDE1AP54750 535 aa6.19□□□□□ -1.42
TDP1-215ENST00000556498 NR1H2P55055 460 aa6.19□□□□□ -1.42
TDP1-215ENST00000556498 CASP9P55211 416 aa6.19□□□□□ -1.42
TDP1-215ENST00000556498 STARD6P59095 220 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms