RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 SP110Q9HB58 689 aa13.87□□□□□ -0.19
ACTN1-219ENST00000556432 MAP10Q9P2G4 905 aa13.87□□□□□ -0.19
ACTN1-219ENST00000556432 SLC17A4Q9Y2C5 497 aa13.87□□□□□ -0.19
ACTN1-219ENST00000556432 TMEM98Q9Y2Y6 226 aa13.87□□□□□ -0.19
ACTN1-219ENST00000556432 PIPSLA2A3N6 862 aa13.86□□□□□ -0.19
ACTN1-219ENST00000556432 ARHGAP42A6NI28 874 aa13.86□□□□□ -0.19
ACTN1-219ENST00000556432 FGF10O15520 208 aaPredicted RBP13.86□□□□□ -0.19
ACTN1-219ENST00000556432 DDAH2O95865 285 aa13.86□□□□□ -0.19
ACTN1-219ENST00000556432 PDGFAP04085 211 aa13.86□□□□□ -0.19
ACTN1-219ENST00000556432 FURINP09958 794 aa13.86□□□□□ -0.19
ACTN1-219ENST00000556432 KRT3P12035 628 aa13.86□□□□□ -0.19
ACTN1-219ENST00000556432 GPD1P21695 349 aa13.86□□□□□ -0.19
ACTN1-219ENST00000556432 CASP14P31944 242 aa13.86□□□□□ -0.19
ACTN1-219ENST00000556432 VIPR1P32241 457 aa13.86□□□□□ -0.19
ACTN1-219ENST00000556432 DCTP40126 519 aa13.86□□□□□ -0.19
ACTN1-219ENST00000556432 FASLGP48023 281 aa13.86□□□□□ -0.19
ACTN1-219ENST00000556432 PGDP52209 483 aa13.86□□□□□ -0.19
ACTN1-219ENST00000556432 TPI1P60174 286 aa13.86□□□□□ -0.19
ACTN1-219ENST00000556432 HHEXQ03014 270 aa13.86□□□□□ -0.19
ACTN1-219ENST00000556432 MAP7Q14244 749 aa13.86□□□□□ -0.19
ACTN1-219ENST00000556432 TPD52L1Q16890 204 aaPredicted RBP13.86□□□□□ -0.19
ACTN1-219ENST00000556432 MAMDC2Q7Z304 686 aaPredicted RBP13.86□□□□□ -0.19
ACTN1-219ENST00000556432 GALNT13Q8IUC8 556 aa13.86□□□□□ -0.19
ACTN1-219ENST00000556432 GALNT6Q8NCL4 622 aa13.86□□□□□ -0.19
ACTN1-219ENST00000556432 FNIP1Q8TF40 1166 aa13.86□□□□□ -0.19
ACTN1-219ENST00000556432 SLC20A1Q8WUM9 679 aa13.86□□□□□ -0.19
ACTN1-219ENST00000556432 CENPIQ92674 756 aaPredicted RBP13.86□□□□□ -0.19
ACTN1-219ENST00000556432 DTD2Q96FN9 168 aa13.86□□□□□ -0.19
ACTN1-219ENST00000556432 SELENOOQ9BVL4 669 aa13.86□□□□□ -0.19
ACTN1-219ENST00000556432 IGSF5Q9NSI5 407 aa13.86□□□□□ -0.19
ACTN1-219ENST00000556432 KCTD5Q9NXV2 234 aa13.86□□□□□ -0.19
ACTN1-219ENST00000556432 DONSONQ9NYP3 566 aa13.86□□□□□ -0.19
ACTN1-219ENST00000556432 RWDD2AQ9UIY3 292 aa13.86□□□□□ -0.19
ACTN1-219ENST00000556432 SPENQ96T58 3664 aaKnown RBP13.85□□□□□ -0.19
ACTN1-219ENST00000556432 DOPEY1Q5JWR5 2465 aa13.85□□□□□ -0.19
ACTN1-219ENST00000556432 WASH4PA8MWX3 477 aa13.85□□□□□ -0.19
ACTN1-219ENST00000556432 DFFAO00273 331 aa13.85□□□□□ -0.19
ACTN1-219ENST00000556432 DNAJB5O75953 348 aa13.85□□□□□ -0.19
ACTN1-219ENST00000556432 HEXIM1O94992 359 aaKnown RBP13.85□□□□□ -0.19
ACTN1-219ENST00000556432 CPP00450 1065 aa13.85□□□□□ -0.19
ACTN1-219ENST00000556432 PRKCSHP14314 528 aaPredicted RBP13.85□□□□□ -0.19
ACTN1-219ENST00000556432 MMP8P22894 467 aa13.85□□□□□ -0.19
ACTN1-219ENST00000556432 NFKBIAP25963 317 aa13.85□□□□□ -0.19
ACTN1-219ENST00000556432 GPR1P46091 355 aa13.85□□□□□ -0.19
ACTN1-219ENST00000556432 PAPOLAP51003 745 aaKnown RBP13.85□□□□□ -0.19
ACTN1-219ENST00000556432 AP1S1P61966 158 aa13.85□□□□□ -0.19
ACTN1-219ENST00000556432 MAN2A1Q16706 1144 aa13.85□□□□□ -0.19
ACTN1-219ENST00000556432 HSD11B1LQ7Z5J1 315 aa13.85□□□□□ -0.19
ACTN1-219ENST00000556432 TRIM74Q86UV6 250 aa13.85□□□□□ -0.19
ACTN1-219ENST00000556432 ELOA2Q8IYF1 753 aaPredicted RBP13.85□□□□□ -0.19
ACTN1-219ENST00000556432 SFRP1Q8N474 314 aa13.85□□□□□ -0.19
ACTN1-219ENST00000556432 EPS8L1Q8TE68 723 aa13.85□□□□□ -0.19
ACTN1-219ENST00000556432 ELMO2Q96JJ3 720 aa13.85□□□□□ -0.19
ACTN1-219ENST00000556432 LRRC19Q9H756 370 aa13.85□□□□□ -0.19
ACTN1-219ENST00000556432 RCOR3Q9P2K3 495 aaPredicted RBP13.85□□□□□ -0.19
ACTN1-219ENST00000556432 LNPEPQ9UIQ6 1025 aa13.85□□□□□ -0.19
ACTN1-219ENST00000556432 KCND3Q9UK17 655 aa13.85□□□□□ -0.19
ACTN1-219ENST00000556432 PRRC2CQ9Y520 2896 aaKnown RBP13.85□□□□□ -0.19
ACTN1-219ENST00000556432 ANKRD62A6NC57 917 aa13.84□□□□□ -0.19
ACTN1-219ENST00000556432 A6NCN8 305 aa13.84□□□□□ -0.19
ACTN1-219ENST00000556432 TRAFD1O14545 582 aaPredicted RBP13.84□□□□□ -0.19
ACTN1-219ENST00000556432 CYP2A6P11509 494 aaPredicted RBP13.84□□□□□ -0.19
ACTN1-219ENST00000556432 ZNF28P17035 718 aa13.84□□□□□ -0.19
ACTN1-219ENST00000556432 RFC1P35251 1148 aaPredicted RBP13.84□□□□□ -0.19
ACTN1-219ENST00000556432 NDST2P52849 883 aa13.84□□□□□ -0.19
ACTN1-219ENST00000556432 EIF2S3LQ2VIR3 472 aaKnown RBP13.84□□□□□ -0.19
ACTN1-219ENST00000556432 NADK2Q4G0N4 442 aa13.84□□□□□ -0.19
ACTN1-219ENST00000556432 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.84□□□□□ -0.19
ACTN1-219ENST00000556432 Q6ZVL8 140 aa13.84□□□□□ -0.19
ACTN1-219ENST00000556432 RASGRP3Q8IV61 690 aa13.84□□□□□ -0.19
ACTN1-219ENST00000556432 PRR7Q8TB68 274 aa13.84□□□□□ -0.19
ACTN1-219ENST00000556432 SH3KBP1Q96B97 665 aa13.84□□□□□ -0.19
ACTN1-219ENST00000556432 SLC39A8Q9C0K1 460 aa13.84□□□□□ -0.19
ACTN1-219ENST00000556432 SARS2Q9NP81 518 aaKnown RBP13.84□□□□□ -0.19
ACTN1-219ENST00000556432 CNOT8Q9UFF9 292 aaKnown RBP13.84□□□□□ -0.19
ACTN1-219ENST00000556432 ZNHIT2Q9UHR6 403 aa13.84□□□□□ -0.19
ACTN1-219ENST00000556432 CD84Q9UIB8 345 aa13.84□□□□□ -0.19
ACTN1-219ENST00000556432 FZD10Q9ULW2 581 aa13.84□□□□□ -0.19
ACTN1-219ENST00000556432 CELSR2Q9HCU4 2923 aa13.84□□□□□ -0.19
ACTN1-219ENST00000556432 CRYBG3Q68DQ2 2970 aa13.84□□□□□ -0.19
ACTN1-219ENST00000556432 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.83□□□□□ -0.2
ACTN1-219ENST00000556432 TTC24A2A3L6 582 aaPredicted RBP13.83□□□□□ -0.2
ACTN1-219ENST00000556432 F8VZ95 297 aa13.83□□□□□ -0.2
ACTN1-219ENST00000556432 DAPK3O43293 454 aa13.83□□□□□ -0.2
ACTN1-219ENST00000556432 CCP110O43303 1012 aa13.83□□□□□ -0.2
ACTN1-219ENST00000556432 SNX2O60749 519 aa13.83□□□□□ -0.2
ACTN1-219ENST00000556432 CREG1O75629 220 aa13.83□□□□□ -0.2
ACTN1-219ENST00000556432 KIAA0754O94854 1291 aa13.83□□□□□ -0.2
ACTN1-219ENST00000556432 ASMTLO95671 621 aa13.83□□□□□ -0.2
ACTN1-219ENST00000556432 EML2O95834 649 aa13.83□□□□□ -0.2
ACTN1-219ENST00000556432 NSFP46459 744 aaKnown RBP13.83□□□□□ -0.2
ACTN1-219ENST00000556432 RENBPP51606 427 aa13.83□□□□□ -0.2
ACTN1-219ENST00000556432 LRP8Q14114 963 aa13.83□□□□□ -0.2
ACTN1-219ENST00000556432 PYCR3Q53H96 274 aa13.83□□□□□ -0.2
ACTN1-219ENST00000556432 KLHDC7AQ5VTJ3 777 aa13.83□□□□□ -0.2
ACTN1-219ENST00000556432 WDR59Q6PJI9 974 aa13.83□□□□□ -0.2
ACTN1-219ENST00000556432 LYSMD3Q7Z3D4 306 aa13.83□□□□□ -0.2
ACTN1-219ENST00000556432 PLXDC1Q8IUK5 500 aa13.83□□□□□ -0.2
ACTN1-219ENST00000556432 SRRM1Q8IYB3 904 aaKnown RBP13.83□□□□□ -0.2
ACTN1-219ENST00000556432 LZTR1Q8N653 840 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms