RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 POC1B-GALNT4F8VUJ3 575 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 GOLGA8TH3BQL2 631 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 H7C0S8 307 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 WNT9AO14904 365 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 MMP20O60882 483 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 ZNF217O75362 1048 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 GOT2P00505 430 aaKnown RBP11□□□□□ -0.65
TMEM260-208ENST00000555905 SHBGP04278 402 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 C6P13671 934 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 ARNTP27540 789 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 OXTRP30559 389 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 MC4RP32245 332 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 CLCN5P51795 746 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 ADPRHP54922 357 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 TAS2R38P59533 333 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 RPS21P63220 83 aaKnown RBP11□□□□□ -0.65
TMEM260-208ENST00000555905 CACNG1Q06432 222 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 SMAD1Q15797 465 aaKnown RBP11□□□□□ -0.65
TMEM260-208ENST00000555905 ZNF284Q2VY69 593 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 KBTBD12Q3ZCT8 623 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 FASTKD1Q53R41 847 aaKnown RBP11□□□□□ -0.65
TMEM260-208ENST00000555905 CWF19L1Q69YN2 538 aaKnown RBP11□□□□□ -0.65
TMEM260-208ENST00000555905 KIAA1161Q6NSJ0 714 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 MRNIPQ6NTE8 343 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 NEK5Q6P3R8 708 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 FAM151BQ6UXP7 276 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 HSD11B1LQ7Z5J1 315 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 PTAR1Q7Z6K3 402 aaPredicted RBP11□□□□□ -0.65
TMEM260-208ENST00000555905 SDCCAG8Q86SQ7 713 aaPredicted RBP11□□□□□ -0.65
TMEM260-208ENST00000555905 CROCCP2Q86T23 111 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 LRRC6Q86X45 466 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 LMNTD2Q8IXW0 634 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 IQCKQ8N0W5 287 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 PPM1NQ8N819 430 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 OR2W6PQ8NHA6 318 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 TBRG4Q969Z0 631 aaKnown RBP eCLIP11□□□□□ -0.65
TMEM260-208ENST00000555905 SGSM3Q96HU1 749 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 COQ10AQ96MF6 247 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 ZIM3Q96PE6 472 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 PLEKHG4BQ96PX9 1271 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 HS3ST6Q96QI5 342 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 ROPN1BQ9BZX4 212 aaPredicted RBP11□□□□□ -0.65
TMEM260-208ENST00000555905 BTBD1Q9H0C5 482 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 FAM83DQ9H4H8 585 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 ROPN1Q9HAT0 212 aaPredicted RBP11□□□□□ -0.65
TMEM260-208ENST00000555905 SGK2Q9HBY8 427 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 ITM2CQ9NQX7 267 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 IARS2Q9NSE4 1012 aaKnown RBP11□□□□□ -0.65
TMEM260-208ENST00000555905 CATSPERZQ9NTU4 200 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 C2orf42Q9NWW7 574 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 KCTD5Q9NXV2 234 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 IL1RAPL1Q9NZN1 696 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 VPS18Q9P253 973 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 USP36Q9P275 1121 aaKnown RBP11□□□□□ -0.65
TMEM260-208ENST00000555905 TXNDC16Q9P2K2 825 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 FETUBQ9UGM5 382 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 LRRK1Q38SD2 2015 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 TBC1D3DA0A087WVF3 549 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 TBC1D3IA0A087WXS9 549 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 TBC1D3EA0A087X179 549 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 TBC1D3KA0A087X1G2 549 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 TBC1D3FA6NER0 549 aaPredicted RBP10.99□□□□□ -0.65
TMEM260-208ENST00000555905 PRR23AA6NEV1 266 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 IGLON5A6NGN9 336 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 GOLGA6L10A6NI86 522 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 LRRC72A6NJI9 287 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 TBC1D3LB9A6J9 549 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 RASGRF2O14827 1237 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 PFDN6O15212 129 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 CD3EAPO15446 510 aaKnown RBP10.99□□□□□ -0.65
TMEM260-208ENST00000555905 ATP8B1O43520 1251 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 TCEA3O75764 348 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 TM7SF2O76062 418 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 SRP72O76094 671 aaKnown RBP10.99□□□□□ -0.65
TMEM260-208ENST00000555905 PRAMEF1O95521 474 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 PDGFBP01127 241 aaPredicted RBP10.99□□□□□ -0.65
TMEM260-208ENST00000555905 IGLV3-19P01714 112 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 INHBAP08476 426 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 NUDT7P0C024 238 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 TBC1D3HP0C7X1 549 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 AOC1P19801 751 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 ITGALP20701 1170 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 PMLP29590 882 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 PPARGP37231 505 aaPredicted RBP10.99□□□□□ -0.65
TMEM260-208ENST00000555905 ETV3P41162 512 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 MSH2P43246 934 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 DCDC1P59894 354 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 SGCGQ13326 291 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 ITGA9Q13797 1035 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 EFTUD2Q15029 972 aaKnown RBP eCLIP10.99□□□□□ -0.65
TMEM260-208ENST00000555905 ZRANB3Q5FWF4 1079 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 AARS2Q5JTZ9 985 aaKnown RBP10.99□□□□□ -0.65
TMEM260-208ENST00000555905 TEDDM1Q5T9Z0 273 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 TBC1D3GQ6DHY5 549 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 ZNF470Q6ECI4 717 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 TBC1D3CQ6IPX1 549 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 Q6ZVL8 140 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 ZNF765Q7L2R6 523 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 CYP2U1Q7Z449 544 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 TECPR1Q7Z6L1 1165 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms