RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 IGFL4Q6B9Z1 124 aa3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 FCRLBQ6BAA4 426 aa3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 HIST2H2BCQ6DN03 193 aa3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 HIST2H2BDQ6DRA6 164 aa3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 C11orf88Q6PI97 169 aa3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 SLC2A7Q6PXP3 512 aa3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 PET117Q6UWS5 81 aa3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 Q6ZPA2 131 aa3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 RBPMS2Q6ZRY4 209 aaKnown RBP3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 MFSD6Q6ZSS7 791 aa3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 DPPA4Q7L190 304 aa3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 ZNF627Q7L945 461 aa3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 SFTPA2Q8IWL1 248 aa3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 FAM217AQ8IXS0 508 aa3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 RBFAQ8N0V3 343 aa3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 ZNF713Q8N859 430 aaPredicted RBP3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 TC2NQ8N9U0 490 aa3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 XXYLT1Q8NBI6 393 aa3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 SCCPDHQ8NBX0 429 aa3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 OR8K5Q8NH50 307 aa3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 PIGOQ8TEQ8 1089 aa3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 MRPS27Q92552 414 aaKnown RBP3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 LPGAT1Q92604 370 aa3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 LARP4BQ92615 738 aaKnown RBP3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 FAM162AQ96A26 154 aa3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 FER1L6-AS2Q96M78 137 aa3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 SPAG5Q96R06 1193 aa3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 ACOX2Q99424 681 aa3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 CITED2Q99967 270 aaPredicted RBP3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 SH2D3AQ9BRG2 576 aa3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 LZTS2Q9BRK4 669 aa3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 WDR83Q9BRX9 315 aaKnown RBP3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 PCGF1Q9BSM1 259 aa3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 NAA11Q9BSU3 229 aaPredicted RBP3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 B3GNT4Q9C0J1 378 aa3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 LHPPQ9H008 270 aa3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 MMP27Q9H306 513 aa3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 AAMDCQ9H7C9 122 aa3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 XAB2Q9HCS7 855 aaKnown RBP3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 MTMR10Q9NXD2 777 aa3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 CRNNQ9UBG3 495 aaPredicted RBP3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 XPO7Q9UIA9 1087 aaKnown RBP3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 TUBE1Q9UJT0 475 aa3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 ZNF148Q9UQR1 794 aa3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 NFE2L3Q9Y4A8 694 aa3.05□□□□□ -1.92
MTHFD1-212ENST00000555858 TRBV5-3A0A0A0MS03 114 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 VGLL3A8MV65 326 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 MAGEB17A8MXT2 336 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 FAM25EA8MYX2 175 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 ATP2A1O14983 1001 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 WDR46O15213 610 aaKnown RBP3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 FOXN1O15353 648 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 SLC7A4O43246 635 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 PLRG1O43660 514 aaKnown RBP3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 RECQL5O94762 991 aaPredicted RBP3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 RGS11O94810 467 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 NDUFB4O95168 129 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 SLU7O95391 586 aaKnown RBP3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 BAG2O95816 211 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 FTCDO95954 541 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 GCP02774 474 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 ATP5BP06576 529 aaKnown RBP3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 TPM3P06753 285 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 CBSLP0DN79 551 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 FDPSP14324 419 aaKnown RBP3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 ERCC2P18074 760 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 KRT4P19013 534 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 CD58P19256 250 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 MYF6P23409 242 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 CBSP35520 551 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 KRT2P35908 639 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 MATR3P43243 847 aaKnown RBP eCLIP3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 RAB28P51157 221 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 ARSEP51690 589 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 RPS13P62277 151 aaKnown RBP3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 TFF2Q03403 129 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 DLG2Q15700 870 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 ASIC2Q16515 512 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 PNLIPRP3Q17RR3 467 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 C2orf68Q2NKX9 166 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 LETM2Q2VYF4 491 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 TTC31Q49AM3 519 aaPredicted RBP3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 TMEM119Q4V9L6 283 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 DCAF6Q58WW2 860 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 DHRS7BQ6IAN0 325 aaPredicted RBP3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 HEPHL1Q6MZM0 1159 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 C16orf87Q6PH81 154 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 PQLC2Q6ZP29 291 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 ERN2Q76MJ5 926 aaKnown RBP3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 TAOK1Q7L7X3 1001 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 CACNA2D4Q7Z3S7 1137 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 CAMKMTQ7Z624 323 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 CAMK1DQ8IU85 385 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 TEX9Q8N6V9 391 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 KDM1BQ8NB78 822 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 TSPAN14Q8NG11 270 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 CEP76Q8TAP6 659 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 GDAP1Q8TB36 358 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 SETD6Q8TBK2 473 aa3.04□□□□□ -1.92
MTHFD1-212ENST00000555858 BICD2Q8TD16 824 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms