RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 DPEP2Q9H4A9 486 aa9.1□□□□□ -0.95
PRKCH-218ENST00000555628 RETREG1Q9H6L5 497 aa9.1□□□□□ -0.95
PRKCH-218ENST00000555628 PRDM8Q9NQV8 689 aa9.1□□□□□ -0.95
PRKCH-218ENST00000555628 TMEM248Q9NWD8 314 aa9.1□□□□□ -0.95
PRKCH-218ENST00000555628 SIDT1Q9NXL6 827 aaKnown RBP9.1□□□□□ -0.95
PRKCH-218ENST00000555628 SLC39A1Q9NY26 324 aa9.1□□□□□ -0.95
PRKCH-218ENST00000555628 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.1□□□□□ -0.95
PRKCH-218ENST00000555628 AKAP7Q9P0M2 348 aaPredicted RBP9.1□□□□□ -0.95
PRKCH-218ENST00000555628 TMEM59LQ9UK28 342 aa9.1□□□□□ -0.95
PRKCH-218ENST00000555628 AJAP1Q9UKB5 411 aaPredicted RBP9.1□□□□□ -0.95
PRKCH-218ENST00000555628 KCTD3Q9Y597 815 aa9.1□□□□□ -0.95
PRKCH-218ENST00000555628 MRPS18BQ9Y676 258 aaKnown RBP9.1□□□□□ -0.95
PRKCH-218ENST00000555628 EFCAB7A8K855 629 aa9.09□□□□□ -0.95
PRKCH-218ENST00000555628 KDELR3O43731 214 aa9.09□□□□□ -0.95
PRKCH-218ENST00000555628 BUB1BO60566 1050 aaPredicted RBP9.09□□□□□ -0.95
PRKCH-218ENST00000555628 PRMT3O60678 531 aa9.09□□□□□ -0.95
PRKCH-218ENST00000555628 RECQL5O94762 991 aaPredicted RBP9.09□□□□□ -0.95
PRKCH-218ENST00000555628 STK17BO94768 372 aa9.09□□□□□ -0.95
PRKCH-218ENST00000555628 F9P00740 461 aa9.09□□□□□ -0.95
PRKCH-218ENST00000555628 LDLRP01130 860 aa9.09□□□□□ -0.95
PRKCH-218ENST00000555628 CEACAM5P06731 702 aa9.09□□□□□ -0.95
PRKCH-218ENST00000555628 MPSTP25325 297 aa9.09□□□□□ -0.95
PRKCH-218ENST00000555628 ALDH4A1P30038 563 aa9.09□□□□□ -0.95
PRKCH-218ENST00000555628 PMS2P54278 862 aa9.09□□□□□ -0.95
PRKCH-218ENST00000555628 TYRO3Q06418 890 aa9.09□□□□□ -0.95
PRKCH-218ENST00000555628 ELOAQ14241 798 aaKnown RBP9.09□□□□□ -0.95
PRKCH-218ENST00000555628 MAP7Q14244 749 aa9.09□□□□□ -0.95
PRKCH-218ENST00000555628 INO80DQ53TQ3 878 aaPredicted RBP9.09□□□□□ -0.95
PRKCH-218ENST00000555628 ZNF468Q5VIY5 522 aaPredicted RBP9.09□□□□□ -0.95
PRKCH-218ENST00000555628 C1QL3Q5VWW1 255 aa9.09□□□□□ -0.95
PRKCH-218ENST00000555628 TRIM65Q6PJ69 517 aa9.09□□□□□ -0.95
PRKCH-218ENST00000555628 ASB18Q6ZVZ8 466 aa9.09□□□□□ -0.95
PRKCH-218ENST00000555628 ENOSF1Q7L5Y1 443 aa9.09□□□□□ -0.95
PRKCH-218ENST00000555628 BTLAQ7Z6A9 289 aa9.09□□□□□ -0.95
PRKCH-218ENST00000555628 FAM131BQ86XD5 332 aa9.09□□□□□ -0.95
PRKCH-218ENST00000555628 XYLT1Q86Y38 959 aa9.09□□□□□ -0.95
PRKCH-218ENST00000555628 ZDHHC17Q8IUH5 632 aa9.09□□□□□ -0.95
PRKCH-218ENST00000555628 CCDC13Q8IYE1 715 aa9.09□□□□□ -0.95
PRKCH-218ENST00000555628 RYBPQ8N488 228 aaPredicted RBP9.09□□□□□ -0.95
PRKCH-218ENST00000555628 TMEM151AQ8N4L1 468 aa9.09□□□□□ -0.95
PRKCH-218ENST00000555628 CCDC112Q8NEF3 446 aa9.09□□□□□ -0.95
PRKCH-218ENST00000555628 CPT1CQ8TCG5 803 aa9.09□□□□□ -0.95
PRKCH-218ENST00000555628 ECHDC3Q96DC8 303 aa9.09□□□□□ -0.95
PRKCH-218ENST00000555628 GSDMAQ96QA5 445 aa9.09□□□□□ -0.95
PRKCH-218ENST00000555628 FRMD8Q9BZ67 464 aaPredicted RBP9.09□□□□□ -0.95
PRKCH-218ENST00000555628 MAGEB5Q9BZ81 275 aa9.09□□□□□ -0.95
PRKCH-218ENST00000555628 GTPBP4Q9BZE4 634 aaKnown RBP9.09□□□□□ -0.95
PRKCH-218ENST00000555628 SCAND2PQ9GZW5 306 aaPredicted RBP9.09□□□□□ -0.95
PRKCH-218ENST00000555628 ZNF768Q9H5H4 540 aaKnown RBP9.09□□□□□ -0.95
PRKCH-218ENST00000555628 CYP4F12Q9HCS2 524 aa9.09□□□□□ -0.95
PRKCH-218ENST00000555628 APMAPQ9HDC9 416 aa9.09□□□□□ -0.95
PRKCH-218ENST00000555628 MLXIPLQ9NP71 852 aa9.09□□□□□ -0.95
PRKCH-218ENST00000555628 UBE2TQ9NPD8 197 aaPredicted RBP9.09□□□□□ -0.95
PRKCH-218ENST00000555628 BRD7Q9NPI1 651 aa9.09□□□□□ -0.95
PRKCH-218ENST00000555628 TMEM51Q9NW97 253 aa9.09□□□□□ -0.95
PRKCH-218ENST00000555628 TAAR2Q9P1P5 351 aa9.09□□□□□ -0.95
PRKCH-218ENST00000555628 DMGDHQ9UI17 866 aaKnown RBP9.09□□□□□ -0.95
PRKCH-218ENST00000555628 STAP1Q9ULZ2 295 aa9.09□□□□□ -0.95
PRKCH-218ENST00000555628 SRPK3Q9UPE1 567 aa9.09□□□□□ -0.95
PRKCH-218ENST00000555628 ATP8A1Q9Y2Q0 1164 aa9.09□□□□□ -0.95
PRKCH-218ENST00000555628 ZDHHC9Q9Y397 364 aa9.09□□□□□ -0.95
PRKCH-218ENST00000555628 CCDC168Q8NDH2 2452 aa9.08□□□□□ -0.96
PRKCH-218ENST00000555628 ZSCAN5CA6NGD5 496 aaPredicted RBP9.08□□□□□ -0.96
PRKCH-218ENST00000555628 RHPN2P1A8MT19 583 aa9.08□□□□□ -0.96
PRKCH-218ENST00000555628 RAMP2O60895 175 aa9.08□□□□□ -0.96
PRKCH-218ENST00000555628 VPS4BO75351 444 aa9.08□□□□□ -0.96
PRKCH-218ENST00000555628 LRIG2O94898 1065 aa9.08□□□□□ -0.96
PRKCH-218ENST00000555628 MAP3K6O95382 1288 aa9.08□□□□□ -0.96
PRKCH-218ENST00000555628 DDAH2O95865 285 aa9.08□□□□□ -0.96
PRKCH-218ENST00000555628 IGSF6O95976 241 aa9.08□□□□□ -0.96
PRKCH-218ENST00000555628 TCN2P20062 427 aa9.08□□□□□ -0.96
PRKCH-218ENST00000555628 ELAVL4P26378 380 aaKnown RBP9.08□□□□□ -0.96
PRKCH-218ENST00000555628 AK4P27144 223 aaPredicted RBP9.08□□□□□ -0.96
PRKCH-218ENST00000555628 CSTF2P33240 577 aaKnown RBP eCLIP9.08□□□□□ -0.96
PRKCH-218ENST00000555628 FASLGP48023 281 aa9.08□□□□□ -0.96
PRKCH-218ENST00000555628 MC1RQ01726 317 aa9.08□□□□□ -0.96
PRKCH-218ENST00000555628 CYTH1Q15438 398 aa9.08□□□□□ -0.96
PRKCH-218ENST00000555628 PAPD7Q5XG87 772 aaKnown RBP9.08□□□□□ -0.96
PRKCH-218ENST00000555628 AFMIDQ63HM1 303 aa9.08□□□□□ -0.96
PRKCH-218ENST00000555628 TMEM71Q6P5X7 295 aa9.08□□□□□ -0.96
PRKCH-218ENST00000555628 LIPIQ6XZB0 460 aa9.08□□□□□ -0.96
PRKCH-218ENST00000555628 ARCQ7LC44 396 aa9.08□□□□□ -0.96
PRKCH-218ENST00000555628 SYT9Q86SS6 491 aa9.08□□□□□ -0.96
PRKCH-218ENST00000555628 TMEM135Q86UB9 458 aa9.08□□□□□ -0.96
PRKCH-218ENST00000555628 APLFQ8IW19 511 aaPredicted RBP9.08□□□□□ -0.96
PRKCH-218ENST00000555628 BEND7Q8N7W2 519 aaPredicted RBP9.08□□□□□ -0.96
PRKCH-218ENST00000555628 TEX19Q8NA77 164 aa9.08□□□□□ -0.96
PRKCH-218ENST00000555628 CASKIN2Q8WXE0 1202 aa9.08□□□□□ -0.96
PRKCH-218ENST00000555628 KIAA1143Q96AT1 154 aaPredicted RBP9.08□□□□□ -0.96
PRKCH-218ENST00000555628 NSMCE3Q96MG7 304 aa9.08□□□□□ -0.96
PRKCH-218ENST00000555628 CFAP57Q96MR6 1250 aa9.08□□□□□ -0.96
PRKCH-218ENST00000555628 CTRCQ99895 268 aa9.08□□□□□ -0.96
PRKCH-218ENST00000555628 DPYSL5Q9BPU6 564 aa9.08□□□□□ -0.96
PRKCH-218ENST00000555628 EFHD1Q9BUP0 239 aa9.08□□□□□ -0.96
PRKCH-218ENST00000555628 TEX101Q9BY14 249 aa9.08□□□□□ -0.96
PRKCH-218ENST00000555628 PDFQ9HBH1 243 aa9.08□□□□□ -0.96
PRKCH-218ENST00000555628 PLCB1Q9NQ66 1216 aa9.08□□□□□ -0.96
PRKCH-218ENST00000555628 FBXO8Q9NRD0 319 aa9.08□□□□□ -0.96
PRKCH-218ENST00000555628 TRNAU1APQ9NX07 287 aaKnown RBP9.08□□□□□ -0.96
PRKCH-218ENST00000555628 DNAI1Q9UI46 699 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms