RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 VPS28Q9UK41 221 aa24.22■■□□□ 1.47
TMEM260-207ENST00000555497 POMPQ9Y244 141 aa24.22■■□□□ 1.47
TMEM260-207ENST00000555497 K7ERQ8 282 aa24.22■■□□□ 1.47
TMEM260-207ENST00000555497 PPP6CO00743 305 aa24.22■■□□□ 1.47
TMEM260-207ENST00000555497 RHOBTB1O94844 696 aa24.22■■□□□ 1.47
TMEM260-207ENST00000555497 SIX3O95343 332 aaPredicted RBP24.22■■□□□ 1.47
TMEM260-207ENST00000555497 HDCP19113 662 aa24.22■■□□□ 1.47
TMEM260-207ENST00000555497 CDH13P55290 713 aa24.22■■□□□ 1.47
TMEM260-207ENST00000555497 HERVK_113P63132 956 aa24.22■■□□□ 1.47
TMEM260-207ENST00000555497 TMA16Q96EY4 203 aaKnown RBP24.22■■□□□ 1.47
TMEM260-207ENST00000555497 BIRC8Q96P09 236 aa24.22■■□□□ 1.47
TMEM260-207ENST00000555497 ATOH8Q96SQ7 321 aa24.22■■□□□ 1.47
TMEM260-207ENST00000555497 ERVK-6Q9BXR3 956 aa24.22■■□□□ 1.47
TMEM260-207ENST00000555497 TRAF6Q9Y4K3 522 aa24.22■■□□□ 1.47
TMEM260-207ENST00000555497 NRG2O14511 850 aaPredicted RBP24.21■■□□□ 1.47
TMEM260-207ENST00000555497 LUC7L3O95232 432 aaKnown RBP24.21■■□□□ 1.47
TMEM260-207ENST00000555497 PRAMEF12O95522 483 aa24.21■■□□□ 1.47
TMEM260-207ENST00000555497 OLFM2O95897 454 aa24.21■■□□□ 1.47
TMEM260-207ENST00000555497 PENKP01210 267 aaPredicted RBP24.21■■□□□ 1.47
TMEM260-207ENST00000555497 ADSLP30566 484 aaPredicted RBP24.21■■□□□ 1.47
TMEM260-207ENST00000555497 MTTPP55157 894 aa24.21■■□□□ 1.47
TMEM260-207ENST00000555497 SATB1Q01826 763 aa24.21■■□□□ 1.47
TMEM260-207ENST00000555497 ZNF783Q6ZMS7 281 aa24.21■■□□□ 1.47
TMEM260-207ENST00000555497 CHSY3Q70JA7 882 aa24.21■■□□□ 1.47
TMEM260-207ENST00000555497 DSELQ8IZU8 1212 aa24.21■■□□□ 1.47
TMEM260-207ENST00000555497 PTGR2Q8N8N7 351 aaPredicted RBP24.21■■□□□ 1.47
TMEM260-207ENST00000555497 TTC1Q99614 292 aa24.21■■□□□ 1.47
TMEM260-207ENST00000555497 SLC30A3Q99726 388 aa24.21■■□□□ 1.47
TMEM260-207ENST00000555497 ADGRE3Q9BY15 652 aa24.21■■□□□ 1.47
TMEM260-207ENST00000555497 CRISPLD2Q9H0B8 497 aa24.21■■□□□ 1.47
TMEM260-207ENST00000555497 SUFUQ9UMX1 484 aa24.21■■□□□ 1.47
TMEM260-207ENST00000555497 FNDC3AQ9Y2H6 1198 aaKnown RBP24.21■■□□□ 1.47
TMEM260-207ENST00000555497 ABHD14A-ACY1A0A1B0GW23 586 aa24.2■■□□□ 1.47
TMEM260-207ENST00000555497 OR1I1O60431 355 aa24.2■■□□□ 1.47
TMEM260-207ENST00000555497 NDUFS3O75489 264 aa24.2■■□□□ 1.47
TMEM260-207ENST00000555497 SRP72O76094 671 aaKnown RBP24.2■■□□□ 1.47
TMEM260-207ENST00000555497 CYP4F8P98187 520 aa24.2■■□□□ 1.47
TMEM260-207ENST00000555497 ILF2Q12905 390 aaKnown RBP24.2■■□□□ 1.47
TMEM260-207ENST00000555497 C1orf53Q5VUE5 145 aa24.2■■□□□ 1.47
TMEM260-207ENST00000555497 HJURPQ8NCD3 748 aaPredicted RBP24.2■■□□□ 1.47
TMEM260-207ENST00000555497 HMGCLL1Q8TB92 370 aa24.2■■□□□ 1.47
TMEM260-207ENST00000555497 FAR2Q96K12 515 aa24.2■■□□□ 1.47
TMEM260-207ENST00000555497 DNMT3BQ9UBC3 853 aaKnown RBP24.2■■□□□ 1.47
TMEM260-207ENST00000555497 SMIM24O75264 130 aa24.2■■□□□ 1.46
TMEM260-207ENST00000555497 LATS1O95835 1130 aa24.2■■□□□ 1.46
TMEM260-207ENST00000555497 LAG3P18627 525 aa24.2■■□□□ 1.46
TMEM260-207ENST00000555497 ATP6V1C1P21283 382 aa24.2■■□□□ 1.46
TMEM260-207ENST00000555497 MC4RP32245 332 aa24.2■■□□□ 1.46
TMEM260-207ENST00000555497 PTPRNQ16849 979 aa24.2■■□□□ 1.46
TMEM260-207ENST00000555497 MUM1Q2TAK8 710 aa24.2■■□□□ 1.46
TMEM260-207ENST00000555497 TRIM68Q6AZZ1 485 aa24.2■■□□□ 1.46
TMEM260-207ENST00000555497 KBTBD2Q8IY47 623 aa24.2■■□□□ 1.46
TMEM260-207ENST00000555497 APCDD1Q8J025 514 aa24.2■■□□□ 1.46
TMEM260-207ENST00000555497 KYQ8NBH2 561 aa24.2■■□□□ 1.46
TMEM260-207ENST00000555497 PYDC1Q8WXC3 89 aa24.2■■□□□ 1.46
TMEM260-207ENST00000555497 MRPL17Q9NRX2 175 aaKnown RBP24.2■■□□□ 1.46
TMEM260-207ENST00000555497 LILRB3O75022 631 aa24.19■■□□□ 1.46
TMEM260-207ENST00000555497 CSF2RAP15509 400 aa24.19■■□□□ 1.46
TMEM260-207ENST00000555497 RHOAP61586 193 aa24.19■■□□□ 1.46
TMEM260-207ENST00000555497 WDR5P61964 334 aaKnown RBP24.19■■□□□ 1.46
TMEM260-207ENST00000555497 AP2B1P63010 937 aa24.19■■□□□ 1.46
TMEM260-207ENST00000555497 SH3BP2P78314 561 aa24.19■■□□□ 1.46
TMEM260-207ENST00000555497 HERC3Q15034 1050 aa24.19■■□□□ 1.46
TMEM260-207ENST00000555497 PFKFB4Q16877 469 aa24.19■■□□□ 1.46
TMEM260-207ENST00000555497 INO80DQ53TQ3 878 aaPredicted RBP24.19■■□□□ 1.46
TMEM260-207ENST00000555497 RNF111Q6ZNA4 994 aa24.19■■□□□ 1.46
TMEM260-207ENST00000555497 GAREM2Q75VX8 874 aa24.19■■□□□ 1.46
TMEM260-207ENST00000555497 KIRREL3Q8IZU9 778 aa24.19■■□□□ 1.46
TMEM260-207ENST00000555497 RHEBL1Q8TAI7 183 aa24.19■■□□□ 1.46
TMEM260-207ENST00000555497 EID2BQ96D98 161 aa24.19■■□□□ 1.46
TMEM260-207ENST00000555497 NSUN5Q96P11 429 aaKnown RBP24.19■■□□□ 1.46
TMEM260-207ENST00000555497 TCF12Q99081 682 aa24.19■■□□□ 1.46
TMEM260-207ENST00000555497 GPR21Q99679 349 aa24.19■■□□□ 1.46
TMEM260-207ENST00000555497 TFB2MQ9H5Q4 396 aaKnown RBP24.19■■□□□ 1.46
TMEM260-207ENST00000555497 S100A14Q9HCY8 104 aa24.19■■□□□ 1.46
TMEM260-207ENST00000555497 ANGPTL2Q9UKU9 493 aa24.19■■□□□ 1.46
TMEM260-207ENST00000555497 GPR39O43194 453 aa24.19■■□□□ 1.46
TMEM260-207ENST00000555497 FZD6O60353 706 aa24.19■■□□□ 1.46
TMEM260-207ENST00000555497 INHBCP55103 352 aa24.19■■□□□ 1.46
TMEM260-207ENST00000555497 HS6ST3Q8IZP7 471 aa24.19■■□□□ 1.46
TMEM260-207ENST00000555497 TRMOQ9BU70 441 aa24.19■■□□□ 1.46
TMEM260-207ENST00000555497 TAS2R13Q9NYV9 303 aa24.19■■□□□ 1.46
TMEM260-207ENST00000555497 PCDHB9Q9Y5E1 797 aa24.19■■□□□ 1.46
TMEM260-207ENST00000555497 KIAA1671Q9BY89 1806 aa24.18■■□□□ 1.46
TMEM260-207ENST00000555497 DENND4CQ5VZ89 1909 aa24.18■■□□□ 1.46
TMEM260-207ENST00000555497 CLTBP09497 229 aa24.18■■□□□ 1.46
TMEM260-207ENST00000555497 UGT3A2Q3SY77 523 aa24.18■■□□□ 1.46
TMEM260-207ENST00000555497 CMTR2Q8IYT2 770 aaKnown RBP24.18■■□□□ 1.46
TMEM260-207ENST00000555497 CLEC4EQ9ULY5 219 aa24.18■■□□□ 1.46
TMEM260-207ENST00000555497 STX7O15400 261 aaKnown RBP24.18■■□□□ 1.46
TMEM260-207ENST00000555497 FKBP6O75344 327 aa24.18■■□□□ 1.46
TMEM260-207ENST00000555497 BAG2O95816 211 aa24.18■■□□□ 1.46
TMEM260-207ENST00000555497 DPP6P42658 865 aa24.18■■□□□ 1.46
TMEM260-207ENST00000555497 CDH18Q13634 790 aa24.18■■□□□ 1.46
TMEM260-207ENST00000555497 CMPK2Q5EBM0 449 aa24.18■■□□□ 1.46
TMEM260-207ENST00000555497 CTSL3PQ5NE16 218 aa24.18■■□□□ 1.46
TMEM260-207ENST00000555497 GK5Q6ZS86 529 aa24.18■■□□□ 1.46
TMEM260-207ENST00000555497 FAM217AQ8IXS0 508 aa24.18■■□□□ 1.46
TMEM260-207ENST00000555497 HIPK4Q8NE63 616 aa24.18■■□□□ 1.46
TMEM260-207ENST00000555497 OR6K2Q8NGY2 324 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms