RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 DPF3Q92784 378 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 RNF34Q969K3 372 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 MYLPFQ96A32 169 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 TAMM41Q96BW9 452 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 MFSD3Q96ES6 412 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 HEPHQ9BQS7 1158 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 RAD21L1Q9H4I0 556 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 POMKQ9H5K3 350 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 RMI1Q9H9A7 625 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 GTSE1Q9NYZ3 720 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 CPQQ9Y646 472 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 ARL5CA6NH57 179 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 C16orf96A6NNT2 1141 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 I6L893 689 aaPredicted RBP10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 AQP9O43315 295 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 ABCB7O75027 752 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 USP12O75317 370 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 DUSP11O75319 330 aaKnown RBP10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 JCHAINP01591 159 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 NTRK1P04629 796 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 AKR1A1P14550 325 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 PTPN2P17706 415 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 RPS9P46781 194 aaKnown RBP10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 RXRGP48443 463 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 OCA2Q04671 838 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 ILF2Q12905 390 aaKnown RBP10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 UPP1Q16831 310 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 CERCAMQ5T4B2 595 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 AGAP7PQ5VUJ5 663 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 CYP2U1Q7Z449 544 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 IGFN1Q86VF2 1251 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 PTRH1Q86Y79 214 aaKnown RBP10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 ADGRG5Q8IZF4 528 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 CCNYL1Q8N7R7 359 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 OSCP1Q8WVF1 389 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 CYGBQ8WWM9 190 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 STARD8Q92502 1023 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 UROC1Q96N76 676 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 RDH12Q96NR8 316 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 ASB2Q96Q27 587 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 FCRL5Q96RD9 977 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 CATSPERBQ9H7T0 1116 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 NANOGQ9H9S0 305 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 IFT80Q9P2H3 777 aaPredicted RBP10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 TYW5A2RUC4 315 aaKnown RBP10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 KRBA1A5PL33 1030 aa10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 PHGDHO43175 533 aaKnown RBP10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 ZNF623O75123 536 aa10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 IGLV3-25P01717 112 aa10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 IGHA2P01877 340 aa10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 GSTT2P0CG29 244 aa10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 GSTT2BP0CG30 244 aa10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 GFAPP14136 432 aa10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 ZNF182P17025 639 aaPredicted RBP10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 FUT4P22083 530 aa10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 GSTM2P28161 218 aa10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 RFC2P35250 354 aa10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 GEMP55040 296 aa10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 GABARAPL2P60520 117 aa10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 POU4F1Q01851 419 aa10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 TNK2Q07912 1038 aa10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 AASDHQ4L235 1098 aaPredicted RBP10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 PKN3Q6P5Z2 889 aa10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 GALNT18Q6P9A2 607 aa10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 CNSTQ6PJW8 725 aa10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 LARP4Q71RC2 724 aaKnown RBP eCLIP10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 TAC4Q86UU9 113 aa10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 LRRC49Q8IUZ0 686 aa10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 ZC3H7AQ8IWR0 971 aaKnown RBP10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 THEM5Q8N1Q8 247 aa10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 TXNDC5Q8NBS9 432 aaKnown RBP10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 EDEM1Q92611 657 aa10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 VMP1Q96GC9 406 aa10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 ALPK1Q96QP1 1244 aa10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 TRIM54Q9BYV2 358 aa10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 TRPV5Q9NQA5 729 aa10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 CHRAC1Q9NRG0 131 aa10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 MIOSQ9NXC5 875 aa10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 FNIP2Q9P278 1114 aa10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 OAZ3Q9UMX2 235 aa10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 AURKCQ9UQB9 309 aa10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 TSC22D4Q9Y3Q8 395 aa10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 TIMM13Q9Y5L4 95 aaPredicted RBP10.68□□□□□ -0.7
MTHFD1-210ENST00000555252 FAM95CA0A1B0GW59 222 aa10.67□□□□□ -0.7
MTHFD1-210ENST00000555252 CCDC78A2IDD5 438 aa10.67□□□□□ -0.7
MTHFD1-210ENST00000555252 NME4O00746 187 aa10.67□□□□□ -0.7
MTHFD1-210ENST00000555252 PFDN6O15212 129 aa10.67□□□□□ -0.7
MTHFD1-210ENST00000555252 IPO13O94829 963 aaKnown RBP10.67□□□□□ -0.7
MTHFD1-210ENST00000555252 MATN4O95460 622 aa10.67□□□□□ -0.7
MTHFD1-210ENST00000555252 UGT2B4P06133 528 aa10.67□□□□□ -0.7
MTHFD1-210ENST00000555252 RBP1P09455 135 aa10.67□□□□□ -0.7
MTHFD1-210ENST00000555252 HOXC13P31276 330 aa10.67□□□□□ -0.7
MTHFD1-210ENST00000555252 GLRBP48167 497 aa10.67□□□□□ -0.7
MTHFD1-210ENST00000555252 SCNN1GP51170 649 aa10.67□□□□□ -0.7
MTHFD1-210ENST00000555252 HNRNPFP52597 415 aaKnown RBP10.67□□□□□ -0.7
MTHFD1-210ENST00000555252 EPS8Q12929 822 aa10.67□□□□□ -0.7
MTHFD1-210ENST00000555252 ITGADQ13349 1161 aa10.67□□□□□ -0.7
MTHFD1-210ENST00000555252 CCL14Q16627 93 aa10.67□□□□□ -0.7
MTHFD1-210ENST00000555252 CYP2A13Q16696 494 aa10.67□□□□□ -0.7
MTHFD1-210ENST00000555252 TIGD5Q53EQ6 642 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms