RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 HSPA13P48723 471 aa11.84□□□□□ -0.51
XRCC3-208ENST00000554811 YBX1P67809 324 aaKnown RBP11.84□□□□□ -0.51
XRCC3-208ENST00000554811 HNRNPDQ14103 355 aaKnown RBP11.84□□□□□ -0.51
XRCC3-208ENST00000554811 PIK3R6Q5UE93 754 aa11.84□□□□□ -0.51
XRCC3-208ENST00000554811 ZNF280BQ86YH2 543 aa11.84□□□□□ -0.51
XRCC3-208ENST00000554811 SLC22A9Q8IVM8 553 aa11.84□□□□□ -0.51
XRCC3-208ENST00000554811 CLYBLQ8N0X4 340 aa11.84□□□□□ -0.51
XRCC3-208ENST00000554811 RTL3Q8N8U3 475 aaKnown RBP11.84□□□□□ -0.51
XRCC3-208ENST00000554811 C2CD4AQ8NCU7 369 aaPredicted RBP11.84□□□□□ -0.51
XRCC3-208ENST00000554811 OR2T34Q8NGX1 318 aa11.84□□□□□ -0.51
XRCC3-208ENST00000554811 OR2T3Q8NH03 318 aa11.84□□□□□ -0.51
XRCC3-208ENST00000554811 CCDC126Q96EE4 140 aa11.84□□□□□ -0.51
XRCC3-208ENST00000554811 KATNAL1Q9BW62 490 aa11.84□□□□□ -0.51
XRCC3-208ENST00000554811 PRKD2Q9BZL6 878 aa11.84□□□□□ -0.51
XRCC3-208ENST00000554811 LATS2Q9NRM7 1088 aa11.84□□□□□ -0.51
XRCC3-208ENST00000554811 TRMT13Q9NUP7 481 aaKnown RBP11.84□□□□□ -0.51
XRCC3-208ENST00000554811 EIF2B4Q9UI10 523 aaKnown RBP11.84□□□□□ -0.51
XRCC3-208ENST00000554811 A0A1B0GTL3 188 aa11.83□□□□□ -0.51
XRCC3-208ENST00000554811 CCDC154A6NI56 674 aa11.83□□□□□ -0.51
XRCC3-208ENST00000554811 TTC36A6NLP5 189 aa11.83□□□□□ -0.51
XRCC3-208ENST00000554811 CNPP09543 421 aaKnown RBP11.83□□□□□ -0.51
XRCC3-208ENST00000554811 DGKQP52824 942 aa11.83□□□□□ -0.51
XRCC3-208ENST00000554811 PRKAA2P54646 552 aa11.83□□□□□ -0.51
XRCC3-208ENST00000554811 INHBEP58166 350 aa11.83□□□□□ -0.51
XRCC3-208ENST00000554811 XIAPP98170 497 aa11.83□□□□□ -0.51
XRCC3-208ENST00000554811 PRKCQQ04759 706 aa11.83□□□□□ -0.51
XRCC3-208ENST00000554811 TRAF2Q12933 501 aa11.83□□□□□ -0.51
XRCC3-208ENST00000554811 TAF10Q12962 218 aa11.83□□□□□ -0.51
XRCC3-208ENST00000554811 OR4D1Q15615 310 aa11.83□□□□□ -0.51
XRCC3-208ENST00000554811 FAM117BQ6P1L5 589 aa11.83□□□□□ -0.51
XRCC3-208ENST00000554811 IL27RAQ6UWB1 636 aa11.83□□□□□ -0.51
XRCC3-208ENST00000554811 GLB1LQ6UWU2 654 aa11.83□□□□□ -0.51
XRCC3-208ENST00000554811 XKR5Q6UX68 686 aa11.83□□□□□ -0.51
XRCC3-208ENST00000554811 CILP2Q8IUL8 1156 aa11.83□□□□□ -0.51
XRCC3-208ENST00000554811 KCNN1Q92952 543 aa11.83□□□□□ -0.51
XRCC3-208ENST00000554811 IGSF8Q969P0 613 aa11.83□□□□□ -0.51
XRCC3-208ENST00000554811 NT5C3BQ969T7 300 aa11.83□□□□□ -0.51
XRCC3-208ENST00000554811 TRIM15Q9C019 465 aa11.83□□□□□ -0.51
XRCC3-208ENST00000554811 ZYG11BQ9C0D3 744 aa11.83□□□□□ -0.51
XRCC3-208ENST00000554811 MRPL40Q9NQ50 206 aaKnown RBP11.83□□□□□ -0.51
XRCC3-208ENST00000554811 ATXN10Q9UBB4 475 aa11.83□□□□□ -0.51
XRCC3-208ENST00000554811 EBF1Q9UH73 591 aa11.83□□□□□ -0.51
XRCC3-208ENST00000554811 ZNHIT2Q9UHR6 403 aa11.83□□□□□ -0.51
XRCC3-208ENST00000554811 DMTF1Q9Y222 760 aa11.83□□□□□ -0.51
XRCC3-208ENST00000554811 DNAJC15Q9Y5T4 150 aa11.83□□□□□ -0.51
XRCC3-208ENST00000554811 MAGED1Q9Y5V3 778 aaPredicted RBP11.83□□□□□ -0.51
XRCC3-208ENST00000554811 HTRA2O43464 458 aaPredicted RBP11.83□□□□□ -0.52
XRCC3-208ENST00000554811 ALDOCP09972 364 aaKnown RBP11.83□□□□□ -0.52
XRCC3-208ENST00000554811 LBPP18428 481 aa11.83□□□□□ -0.52
XRCC3-208ENST00000554811 CAPN3P20807 821 aa11.83□□□□□ -0.52
XRCC3-208ENST00000554811 ARCN1P48444 511 aaKnown RBP11.83□□□□□ -0.52
XRCC3-208ENST00000554811 KCNQ1P51787 676 aa11.83□□□□□ -0.52
XRCC3-208ENST00000554811 UFM1P61960 85 aa11.83□□□□□ -0.52
XRCC3-208ENST00000554811 RHDQ02161 417 aa11.83□□□□□ -0.52
XRCC3-208ENST00000554811 MAP2K5Q13163 448 aa11.83□□□□□ -0.52
XRCC3-208ENST00000554811 LAPTM5Q13571 262 aa11.83□□□□□ -0.52
XRCC3-208ENST00000554811 KIAA0930Q6ICG6 404 aaPredicted RBP11.83□□□□□ -0.52
XRCC3-208ENST00000554811 MARVELD2Q8N4S9 558 aa11.83□□□□□ -0.52
XRCC3-208ENST00000554811 SIDT2Q8NBJ9 832 aaKnown RBP11.83□□□□□ -0.52
XRCC3-208ENST00000554811 DDI1Q8WTU0 396 aa11.83□□□□□ -0.52
XRCC3-208ENST00000554811 ZFAND2BQ8WV99 257 aa11.83□□□□□ -0.52
XRCC3-208ENST00000554811 GFM2Q969S9 779 aaKnown RBP11.83□□□□□ -0.52
XRCC3-208ENST00000554811 SDCCAG3Q96C92 435 aa11.83□□□□□ -0.52
XRCC3-208ENST00000554811 FAR2Q96K12 515 aa11.83□□□□□ -0.52
XRCC3-208ENST00000554811 SERPINB11Q96P15 392 aa11.83□□□□□ -0.52
XRCC3-208ENST00000554811 CINPQ9BW66 212 aaPredicted RBP11.83□□□□□ -0.52
XRCC3-208ENST00000554811 GID8Q9NWU2 228 aa11.83□□□□□ -0.52
XRCC3-208ENST00000554811 NDUFA13Q9P0J0 144 aa11.83□□□□□ -0.52
XRCC3-208ENST00000554811 PCDH10Q9P2E7 1040 aa11.83□□□□□ -0.52
XRCC3-208ENST00000554811 GON4LQ3T8J9 2241 aa11.83□□□□□ -0.52
XRCC3-208ENST00000554811 RGPD3A6NKT7 1758 aaPredicted RBP11.83□□□□□ -0.52
XRCC3-208ENST00000554811 RGPD4Q7Z3J3 1758 aa11.83□□□□□ -0.52
XRCC3-208ENST00000554811 NME4O00746 187 aa11.83□□□□□ -0.52
XRCC3-208ENST00000554811 GABRDO14764 452 aa11.83□□□□□ -0.52
XRCC3-208ENST00000554811 OR1I1O60431 355 aa11.83□□□□□ -0.52
XRCC3-208ENST00000554811 OR4F21O95013 312 aa11.83□□□□□ -0.52
XRCC3-208ENST00000554811 ALBP02768 609 aa11.83□□□□□ -0.52
XRCC3-208ENST00000554811 SERPINF2P08697 491 aa11.83□□□□□ -0.52
XRCC3-208ENST00000554811 RPS24P62847 133 aaKnown RBP11.83□□□□□ -0.52
XRCC3-208ENST00000554811 C18orf21Q32NC0 220 aaPredicted RBP11.83□□□□□ -0.52
XRCC3-208ENST00000554811 ATP6AP1LQ52LC2 224 aa11.83□□□□□ -0.52
XRCC3-208ENST00000554811 ANKS6Q68DC2 871 aa11.83□□□□□ -0.52
XRCC3-208ENST00000554811 FBXL22Q6P050 247 aa11.83□□□□□ -0.52
XRCC3-208ENST00000554811 TMEM207Q6UWW9 146 aa11.83□□□□□ -0.52
XRCC3-208ENST00000554811 ANKRD23Q86SG2 305 aa11.83□□□□□ -0.52
XRCC3-208ENST00000554811 SAPCD2Q86UD0 394 aa11.83□□□□□ -0.52
XRCC3-208ENST00000554811 BPIFB6Q8NFQ5 453 aa11.83□□□□□ -0.52
XRCC3-208ENST00000554811 METTL6Q8TCB7 284 aa11.83□□□□□ -0.52
XRCC3-208ENST00000554811 TCF12Q99081 682 aa11.83□□□□□ -0.52
XRCC3-208ENST00000554811 OSER1Q9NX31 292 aa11.83□□□□□ -0.52
XRCC3-208ENST00000554811 TRMT6Q9UJA5 497 aaKnown RBP11.83□□□□□ -0.52
XRCC3-208ENST00000554811 A0A1W2PQ67 120 aa11.82□□□□□ -0.52
XRCC3-208ENST00000554811 STX7O15400 261 aaKnown RBP11.82□□□□□ -0.52
XRCC3-208ENST00000554811 NPHS1O60500 1241 aa11.82□□□□□ -0.52
XRCC3-208ENST00000554811 MGEA5O60502 916 aa11.82□□□□□ -0.52
XRCC3-208ENST00000554811 CDK14O94921 469 aa11.82□□□□□ -0.52
XRCC3-208ENST00000554811 H6PDO95479 791 aa11.82□□□□□ -0.52
XRCC3-208ENST00000554811 RPL17P18621 184 aaKnown RBP11.82□□□□□ -0.52
XRCC3-208ENST00000554811 HMOX2P30519 316 aa11.82□□□□□ -0.52
XRCC3-208ENST00000554811 SLC5A2P31639 672 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms