RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 TSPY1Q01534 308 aa3.17□□□□□ -1.9
SCFD1-213ENST00000554776 EGR4Q05215 589 aa3.17□□□□□ -1.9
SCFD1-213ENST00000554776 EPS8Q12929 822 aa3.17□□□□□ -1.9
SCFD1-213ENST00000554776 IKQ13123 557 aaPredicted RBP3.17□□□□□ -1.9
SCFD1-213ENST00000554776 CTTNQ14247 550 aaKnown RBP3.17□□□□□ -1.9
SCFD1-213ENST00000554776 MYBPC2Q14324 1141 aa3.17□□□□□ -1.9
SCFD1-213ENST00000554776 FSCBQ5H9T9 825 aa3.17□□□□□ -1.9
SCFD1-213ENST00000554776 ANKRD54Q6NXT1 300 aa3.17□□□□□ -1.9
SCFD1-213ENST00000554776 SARM1Q6SZW1 724 aa3.17□□□□□ -1.9
SCFD1-213ENST00000554776 AACSQ86V21 672 aa3.17□□□□□ -1.9
SCFD1-213ENST00000554776 TEX11Q8IYF3 940 aa3.17□□□□□ -1.9
SCFD1-213ENST00000554776 POC5Q8NA72 575 aa3.17□□□□□ -1.9
SCFD1-213ENST00000554776 MIGA1Q8NAN2 632 aa3.17□□□□□ -1.9
SCFD1-213ENST00000554776 NEK9Q8TD19 979 aa3.17□□□□□ -1.9
SCFD1-213ENST00000554776 SNAPC3Q92966 411 aa3.17□□□□□ -1.9
SCFD1-213ENST00000554776 IGSF8Q969P0 613 aa3.17□□□□□ -1.9
SCFD1-213ENST00000554776 ARHGEF26Q96DR7 871 aa3.17□□□□□ -1.9
SCFD1-213ENST00000554776 PHF21BQ96EK2 531 aa3.17□□□□□ -1.9
SCFD1-213ENST00000554776 FEM1CQ96JP0 617 aa3.17□□□□□ -1.9
SCFD1-213ENST00000554776 PPP1R13BQ96KQ4 1090 aa3.17□□□□□ -1.9
SCFD1-213ENST00000554776 ZNF570Q96NI8 536 aa3.17□□□□□ -1.9
SCFD1-213ENST00000554776 OR2A14Q96R47 310 aa3.17□□□□□ -1.9
SCFD1-213ENST00000554776 ABHD1Q96SE0 405 aa3.17□□□□□ -1.9
SCFD1-213ENST00000554776 SUCLA2Q9P2R7 463 aaPredicted RBP3.17□□□□□ -1.9
SCFD1-213ENST00000554776 WNT16Q9UBV4 365 aa3.17□□□□□ -1.9
SCFD1-213ENST00000554776 CHORDC1Q9UHD1 332 aaPredicted RBP3.17□□□□□ -1.9
SCFD1-213ENST00000554776 LRP12Q9Y561 859 aa3.17□□□□□ -1.9
SCFD1-213ENST00000554776 UTYO14607 1347 aa3.17□□□□□ -1.9
SCFD1-213ENST00000554776 IGHV4-28A0A0C4DH34 117 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 TMEM202A6NGA9 273 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 J3KR12 359 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 SH2B2O14492 632 aaPredicted RBP3.16□□□□□ -1.9
SCFD1-213ENST00000554776 VCYO14598 125 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 NDUFS3O75489 264 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 KCNK5O95279 499 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 MMP2P08253 660 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 PLA2G2AP14555 144 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 NAGAP17050 411 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 MYF6P23409 242 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 TNFRSF8P28908 595 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 SLC15A1P46059 708 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 COMPP49747 757 aaPredicted RBP3.16□□□□□ -1.9
SCFD1-213ENST00000554776 NUDT6P53370 316 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 LTBQ06643 244 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 CRYZQ08257 329 aaKnown RBP3.16□□□□□ -1.9
SCFD1-213ENST00000554776 ST3GAL1Q11201 340 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 NAB2Q15742 525 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 EIF2S3LQ2VIR3 472 aaKnown RBP3.16□□□□□ -1.9
SCFD1-213ENST00000554776 KLHL22Q53GT1 634 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 IGSF11Q5DX21 431 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 PLEKHS1Q5SXH7 462 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 C8orf82Q6P1X6 216 aaPredicted RBP3.16□□□□□ -1.9
SCFD1-213ENST00000554776 MON1BQ7L1V2 547 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 KBTBD6Q86V97 674 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 PALB2Q86YC2 1186 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 TICAM1Q8IUC6 712 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 SPATA2LQ8IUW3 424 aaPredicted RBP3.16□□□□□ -1.9
SCFD1-213ENST00000554776 SFTPA2Q8IWL1 248 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 ADHFE1Q8IWW8 467 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 IL17RCQ8NAC3 791 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 ZBTB8BQ8NAP8 495 aaPredicted RBP3.16□□□□□ -1.9
SCFD1-213ENST00000554776 KCTD6Q8NC69 237 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 CCDC191Q8NCU4 936 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 ELP5Q8TE02 316 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 SNRNP27Q8WVK2 155 aaKnown RBP3.16□□□□□ -1.9
SCFD1-213ENST00000554776 SLC22A18Q96BI1 424 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 TMEM68Q96MH6 324 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 NCAPGQ9BPX3 1015 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 TMEM47Q9BQJ4 181 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 KLHL4Q9C0H6 718 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 SIL1Q9H173 461 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 NDST4Q9H3R1 872 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 TMEM51Q9NW97 253 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 OGFRQ9NZT2 677 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 MRPL15Q9P015 296 aaKnown RBP3.16□□□□□ -1.9
SCFD1-213ENST00000554776 NFKBIL1Q9UBC1 381 aaPredicted RBP3.16□□□□□ -1.9
SCFD1-213ENST00000554776 IL36RNQ9UBH0 155 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 RCOR1Q9UKL0 485 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 NFE2L3Q9Y4A8 694 aa3.16□□□□□ -1.9
SCFD1-213ENST00000554776 TRIP12Q14669 1992 aaPredicted RBP3.16□□□□□ -1.9
SCFD1-213ENST00000554776 C4orf47A7E2U8 309 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 AKR1B15C9JRZ8 316 aaPredicted RBP3.15□□□□□ -1.91
SCFD1-213ENST00000554776 TIMM23O14925 209 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 HCRTR2O43614 444 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 ITM2AO43736 263 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 HS6ST1O60243 411 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 MTA2O94776 668 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 HOXB5P09067 269 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 ANXA7P20073 488 aaKnown RBP3.15□□□□□ -1.91
SCFD1-213ENST00000554776 SAT1P21673 171 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 AMTP48728 403 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 PCYT1AP49585 367 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 HSD17B4P51659 736 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 SUOXP51687 545 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 RRP1P56182 461 aaKnown RBP3.15□□□□□ -1.91
SCFD1-213ENST00000554776 CDC16Q13042 620 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 PCLAFQ15004 111 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 DLG2Q15700 870 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 TMEM266Q2M3C6 531 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 USP41Q3LFD5 358 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms