RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 UBL4BQ8N7F7 174 aa10.64□□□□□ -0.71
SHMT2-213ENST00000554600 SPATA22Q8NHS9 363 aa10.64□□□□□ -0.71
SHMT2-213ENST00000554600 IFI44Q8TCB0 444 aa10.64□□□□□ -0.71
SHMT2-213ENST00000554600 MAPK15Q8TD08 544 aa10.64□□□□□ -0.71
SHMT2-213ENST00000554600 CCHCR1Q8TD31 782 aa10.64□□□□□ -0.71
SHMT2-213ENST00000554600 SCAMP4Q969E2 229 aa10.64□□□□□ -0.71
SHMT2-213ENST00000554600 TBATAQ96M53 351 aa10.64□□□□□ -0.71
SHMT2-213ENST00000554600 QKIQ96PU8 341 aaKnown RBP eCLIP10.64□□□□□ -0.71
SHMT2-213ENST00000554600 RIOK2Q9BVS4 552 aaKnown RBP10.64□□□□□ -0.71
SHMT2-213ENST00000554600 OSBPL8Q9BZF1 889 aa10.64□□□□□ -0.71
SHMT2-213ENST00000554600 CARS2Q9HA77 564 aaKnown RBP10.64□□□□□ -0.71
SHMT2-213ENST00000554600 USP29Q9HBJ7 922 aa10.64□□□□□ -0.71
SHMT2-213ENST00000554600 PKD2L2Q9NZM6 624 aa10.64□□□□□ -0.71
SHMT2-213ENST00000554600 NCKIPSDQ9NZQ3 722 aa10.64□□□□□ -0.71
SHMT2-213ENST00000554600 GPR34Q9UPC5 381 aa10.64□□□□□ -0.71
SHMT2-213ENST00000554600 ZFYVE26Q68DK2 2539 aa10.63□□□□□ -0.71
SHMT2-213ENST00000554600 A0A0U1RQJ8 604 aa10.63□□□□□ -0.71
SHMT2-213ENST00000554600 PRSS38A1L453 326 aa10.63□□□□□ -0.71
SHMT2-213ENST00000554600 TRABD2BA6NFA1 517 aa10.63□□□□□ -0.71
SHMT2-213ENST00000554600 HACD1B0YJ81 288 aa10.63□□□□□ -0.71
SHMT2-213ENST00000554600 APOC4-APOC2K7ER74 178 aa10.63□□□□□ -0.71
SHMT2-213ENST00000554600 TNFRSF10CO14798 259 aa10.63□□□□□ -0.71
SHMT2-213ENST00000554600 INPP4BO15327 924 aa10.63□□□□□ -0.71
SHMT2-213ENST00000554600 ASMTLO95671 621 aa10.63□□□□□ -0.71
SHMT2-213ENST00000554600 APOC2P02655 101 aa10.63□□□□□ -0.71
SHMT2-213ENST00000554600 HOXC4P09017 264 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-213ENST00000554600 GNPDA1P46926 289 aa10.63□□□□□ -0.71
SHMT2-213ENST00000554600 CDK3Q00526 305 aa10.63□□□□□ -0.71
SHMT2-213ENST00000554600 OTUD4Q01804 1114 aaKnown RBP10.63□□□□□ -0.71
SHMT2-213ENST00000554600 CDK18Q07002 472 aa10.63□□□□□ -0.71
SHMT2-213ENST00000554600 TARDBPQ13148 414 aaKnown RBP eCLIP10.63□□□□□ -0.71
SHMT2-213ENST00000554600 KCTD16Q68DU8 428 aa10.63□□□□□ -0.71
SHMT2-213ENST00000554600 AADACL2Q6P093 401 aa10.63□□□□□ -0.71
SHMT2-213ENST00000554600 GUSBP11Q6P575 273 aa10.63□□□□□ -0.71
SHMT2-213ENST00000554600 DARS2Q6PI48 645 aaKnown RBP10.63□□□□□ -0.71
SHMT2-213ENST00000554600 LYSMD3Q7Z3D4 306 aa10.63□□□□□ -0.71
SHMT2-213ENST00000554600 TECPR1Q7Z6L1 1165 aa10.63□□□□□ -0.71
SHMT2-213ENST00000554600 TRIM74Q86UV6 250 aa10.63□□□□□ -0.71
SHMT2-213ENST00000554600 SLC35F3Q8IY50 421 aa10.63□□□□□ -0.71
SHMT2-213ENST00000554600 LRRC57Q8N9N7 239 aa10.63□□□□□ -0.71
SHMT2-213ENST00000554600 FAM181AQ8N9Y4 354 aa10.63□□□□□ -0.71
SHMT2-213ENST00000554600 FAM46DQ8NEK8 389 aa10.63□□□□□ -0.71
SHMT2-213ENST00000554600 ACTL9Q8TC94 416 aa10.63□□□□□ -0.71
SHMT2-213ENST00000554600 HTR3CQ8WXA8 447 aa10.63□□□□□ -0.71
SHMT2-213ENST00000554600 TEKT5Q96M29 485 aa10.63□□□□□ -0.71
SHMT2-213ENST00000554600 FAM118BQ9BPY3 351 aa10.63□□□□□ -0.71
SHMT2-213ENST00000554600 TMEM121BQ9BXQ6 578 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-213ENST00000554600 TEX101Q9BY14 249 aa10.63□□□□□ -0.71
SHMT2-213ENST00000554600 GPR63Q9BZJ6 419 aa10.63□□□□□ -0.71
SHMT2-213ENST00000554600 TMEM168Q9H0V1 697 aa10.63□□□□□ -0.71
SHMT2-213ENST00000554600 CCDC86Q9H6F5 360 aaKnown RBP10.63□□□□□ -0.71
SHMT2-213ENST00000554600 C10orf88Q9H8K7 445 aa10.63□□□□□ -0.71
SHMT2-213ENST00000554600 ZFYVE1Q9HBF4 777 aa10.63□□□□□ -0.71
SHMT2-213ENST00000554600 RALYQ9UKM9 306 aaKnown RBP10.63□□□□□ -0.71
SHMT2-213ENST00000554600 PADI4Q9UM07 663 aa10.63□□□□□ -0.71
SHMT2-213ENST00000554600 GUCA1BQ9UMX6 200 aa10.63□□□□□ -0.71
SHMT2-213ENST00000554600 PACSIN2Q9UNF0 486 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-213ENST00000554600 SHOC2Q9UQ13 582 aa10.63□□□□□ -0.71
SHMT2-213ENST00000554600 CLCA2Q9UQC9 943 aa10.63□□□□□ -0.71
SHMT2-213ENST00000554600 DGKBQ9Y6T7 804 aa10.63□□□□□ -0.71
SHMT2-213ENST00000554600 LY6G6EA0A0G2JKS1 128 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 GOLGA6L9A6NEM1 432 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 B4DGG1 531 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 OPA1O60313 960 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 STK10O94804 968 aaKnown RBP10.62□□□□□ -0.71
SHMT2-213ENST00000554600 TJP3O95049 919 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 NDST3O95803 873 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 MT-CO3P00414 261 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 PYGLP06737 847 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 PYGMP11217 842 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 RBL1P28749 1068 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 POLD2P49005 469 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 EIF3EP60228 445 aaKnown RBP10.62□□□□□ -0.71
SHMT2-213ENST00000554600 INSM1Q01101 510 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-213ENST00000554600 DPTQ07507 201 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 WASHC5Q12768 1159 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 NOMO1Q15155 1222 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 ALS2CLQ60I27 953 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 LVRNQ6Q4G3 990 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 MARK2Q7KZI7 788 aaKnown RBP10.62□□□□□ -0.71
SHMT2-213ENST00000554600 ZNF765Q7L2R6 523 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 CDKL3Q8IVW4 592 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-213ENST00000554600 NRSN1Q8IZ57 195 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 ZNF567Q8N184 647 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 CBARPQ8N350 705 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-213ENST00000554600 SDR16C5Q8N3Y7 309 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 SLC25A41Q8N5S1 370 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 PDCD7Q8N8D1 485 aaKnown RBP10.62□□□□□ -0.71
SHMT2-213ENST00000554600 KYQ8NBH2 561 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 IPMKQ8NFU5 416 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 MDM1Q8TC05 714 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 ALG3Q92685 438 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 NAT6Q93015 286 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 HIC2Q96JB3 615 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 AGAP2Q99490 1192 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 VAT1Q99536 393 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 HERPUD2Q9BSE4 406 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 BOCQ9BWV1 1114 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 DPEP2Q9H4A9 486 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 FAM83DQ9H4H8 585 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms