RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 TFB1MQ8WVM0 346 aaKnown RBP7.51□□□□□ -1.21
LINC00640-201ENST00000554409 SCG3Q8WXD2 468 aaKnown RBP7.51□□□□□ -1.21
LINC00640-201ENST00000554409 OR1E3Q8WZA6 343 aa7.51□□□□□ -1.21
LINC00640-201ENST00000554409 KRT35Q92764 455 aa7.51□□□□□ -1.21
LINC00640-201ENST00000554409 P3H4Q92791 437 aa7.51□□□□□ -1.21
LINC00640-201ENST00000554409 TSACCQ96A04 125 aaPredicted RBP7.51□□□□□ -1.21
LINC00640-201ENST00000554409 TEKT5Q96M29 485 aa7.51□□□□□ -1.21
LINC00640-201ENST00000554409 QKIQ96PU8 341 aaKnown RBP eCLIP7.51□□□□□ -1.21
LINC00640-201ENST00000554409 TRIB3Q96RU7 358 aa7.51□□□□□ -1.21
LINC00640-201ENST00000554409 VAT1Q99536 393 aa7.51□□□□□ -1.21
LINC00640-201ENST00000554409 LGR4Q9BXB1 951 aa7.51□□□□□ -1.21
LINC00640-201ENST00000554409 ADGRE3Q9BY15 652 aa7.51□□□□□ -1.21
LINC00640-201ENST00000554409 FRMD8Q9BZ67 464 aaPredicted RBP7.51□□□□□ -1.21
LINC00640-201ENST00000554409 SLC25A51Q9H1U9 297 aa7.51□□□□□ -1.21
LINC00640-201ENST00000554409 ABCG8Q9H221 673 aa7.51□□□□□ -1.21
LINC00640-201ENST00000554409 PHPT1Q9NRX4 125 aaPredicted RBP7.51□□□□□ -1.21
LINC00640-201ENST00000554409 SAE1Q9UBE0 346 aaPredicted RBP7.51□□□□□ -1.21
LINC00640-201ENST00000554409 ZMIZ1Q9ULJ6 1067 aa7.51□□□□□ -1.21
LINC00640-201ENST00000554409 PCDHA3Q9Y5H8 950 aa7.51□□□□□ -1.21
LINC00640-201ENST00000554409 DUSP10Q9Y6W6 482 aa7.51□□□□□ -1.21
LINC00640-201ENST00000554409 CHD8Q9HCK8 2581 aa7.51□□□□□ -1.21
LINC00640-201ENST00000554409 CEP295Q9C0D2 2601 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 ZNF106Q9H2Y7 1883 aaKnown RBP7.5□□□□□ -1.21
LINC00640-201ENST00000554409 A0A0U1RQS6 177 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 C1orf232A0A0U1RR37 186 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 GRID2IPA4D2P6 1211 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 RGSL1A5PLK6 1076 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 FAM149AA5PLN7 773 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 GOLGA6L6A8MZA4 724 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 YY2O15391 372 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 OPA1O60313 960 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 CEACAM5P06731 702 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 CELA2BP08218 269 aaPredicted RBP7.5□□□□□ -1.21
LINC00640-201ENST00000554409 JUPP14923 745 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 GPR1P46091 355 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 RWDD2BP57060 319 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 WASHC5Q12768 1159 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 NOMO1Q15155 1222 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 HENMT1Q5T8I9 393 aaKnown RBP7.5□□□□□ -1.21
LINC00640-201ENST00000554409 KAZNQ674X7 775 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 RAET1GQ6H3X3 334 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 GUSBP11Q6P575 273 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 RD3Q7Z3Z2 195 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 KIAA1328Q86T90 577 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 PROSER1Q86XN7 944 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 SLC35F3Q8IY50 421 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 SYCE1Q8N0S2 351 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 ARL10Q8N8L6 244 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 OR6C4Q8NGE1 309 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 WDR48Q8TAF3 677 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 KIAA1524Q8TCG1 905 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 NAT6Q93015 286 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 AP2M1Q96CW1 435 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 THAP11Q96EK4 314 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 SCARF2Q96GP6 870 aaPredicted RBP7.5□□□□□ -1.21
LINC00640-201ENST00000554409 AGAP3Q96P47 875 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 SMIM14Q96QK8 99 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 WDR24Q96S15 920 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 MLPHQ9BV36 600 aaPredicted RBP7.5□□□□□ -1.21
LINC00640-201ENST00000554409 CEP41Q9BYV8 373 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 NRSN2Q9GZP1 204 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 CCDC86Q9H6F5 360 aaKnown RBP7.5□□□□□ -1.21
LINC00640-201ENST00000554409 GLOD4Q9HC38 313 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 MAGEE1Q9HCI5 957 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 MRPL40Q9NQ50 206 aaKnown RBP7.5□□□□□ -1.21
LINC00640-201ENST00000554409 PKD2L2Q9NZM6 624 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 SEPT10Q9P0V9 454 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 NFKBIL1Q9UBC1 381 aaPredicted RBP7.5□□□□□ -1.21
LINC00640-201ENST00000554409 PADI4Q9UM07 663 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 DOLKQ9UPQ8 538 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 CLCA2Q9UQC9 943 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 SLC17A4Q9Y2C5 497 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 TPRP12270 2363 aaKnown RBP7.5□□□□□ -1.21
LINC00640-201ENST00000554409 USP24Q9UPU5 2620 aa7.5□□□□□ -1.21
LINC00640-201ENST00000554409 ZFC3H1O60293 1989 aaKnown RBP7.5□□□□□ -1.21
LINC00640-201ENST00000554409 AKAP13Q12802 2813 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 TRABD2BA6NFA1 517 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 MIF4GDA9UHW6 222 aaKnown RBP7.49□□□□□ -1.21
LINC00640-201ENST00000554409 RNF223E7ERA6 249 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 TCEA3O75764 348 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 ZNF189O75820 626 aaPredicted RBP7.49□□□□□ -1.21
LINC00640-201ENST00000554409 CLDN7O95471 211 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 NDST3O95803 873 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 MT-CYBP00156 380 aaPredicted RBP7.49□□□□□ -1.21
LINC00640-201ENST00000554409 MT-CO3P00414 261 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 FUCA1P04066 466 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 IVLP07476 585 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 MYF5P13349 255 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 CD68P34810 354 aaPredicted RBP7.49□□□□□ -1.21
LINC00640-201ENST00000554409 SPINT3P49223 89 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 NAP1L1P55209 391 aaKnown RBP7.49□□□□□ -1.21
LINC00640-201ENST00000554409 CLDN6P56747 220 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 GSDMDP57764 484 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 DCDC1P59894 354 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 CDK18Q07002 472 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 KIF5AQ12840 1032 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 TARDBPQ13148 414 aaKnown RBP eCLIP7.49□□□□□ -1.21
LINC00640-201ENST00000554409 GALNT3Q14435 633 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 RTP5Q14D33 572 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 PERM1Q5SV97 790 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms