RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 PACS1Q6VY07 963 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 CERS6Q6ZMG9 384 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 USP30Q70CQ3 517 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 SYT13Q7L8C5 426 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 TAS2R42Q7RTR8 314 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 TSPAN33Q86UF1 283 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 CACUL1Q86Y37 369 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 NRSN1Q8IZ57 195 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 UNC5BQ8IZJ1 945 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 GPR150Q8NGU9 434 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 PLEKHG4BQ96PX9 1271 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 FAM83DQ9H4H8 585 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 SUDS3Q9H7L9 328 aaPredicted RBP10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 TBC1D17Q9HA65 648 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 TMBIM4Q9HC24 238 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 MUTYHQ9UIF7 546 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 FKBPLQ9UIM3 349 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 FBXO5Q9UKT4 447 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 KIAA1549LQ6ZVL6 1849 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 A0A1W2PP55 124 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 SHISA7A6NL88 538 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 GOLGA8CPA6NN73 597 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 CCL22O00626 93 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 WNT9AO14904 365 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 AREL1O15033 823 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 SRP72O76094 671 aaKnown RBP10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 MT-ND3P03897 115 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 CHRM1P11229 460 aaPredicted RBP10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 BPIP17213 487 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 OGNP20774 298 aaKnown RBP10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 COL9A1P20849 921 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 LHCGRP22888 699 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 CD151P48509 253 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 SPINT3P49223 89 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 LIG3P49916 1009 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 ARSDP51689 593 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 SLC12A2P55011 1212 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 ZXDAP98168 799 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 DNAJC3Q13217 504 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 PTPRCAPQ14761 206 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 EFTUD2Q15029 972 aaKnown RBP eCLIP10.43□□□□□ -0.745e-7■■■■■ 43.9
TMEM55B-205ENST00000554028 SMAD1Q15797 465 aaKnown RBP10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 FAM151BQ6UXP7 276 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 LIPIQ6XZB0 460 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 SNX20Q7Z614 316 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 CNTN4Q8IWV2 1026 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 C2CD4AQ8NCU7 369 aaPredicted RBP10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 FLCNQ8NFG4 579 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 TSTD1Q8NFU3 115 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 ZNF398Q8TD17 642 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 DCAKDQ8WVC6 231 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 ZBTB9Q96C00 473 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 ULK4Q96C45 1275 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 ATP6V1G3Q96LB4 118 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 AGAP2Q99490 1192 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 SH3GL2Q99962 352 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 IER2Q9BTL4 223 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 DHRS4Q9BTZ2 278 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 WRAP53Q9BUR4 548 aaKnown RBP10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 C1QTNF7Q9BXJ2 289 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 MKRN2Q9H000 416 aaKnown RBP10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 CCDC68Q9H2F9 335 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 ASB8Q9H765 288 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 SMYD2Q9NRG4 433 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 INTS10Q9NVR2 710 aaKnown RBP10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 IL1RAPL1Q9NZN1 696 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 SENP1Q9P0U3 644 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 LGALS13Q9UHV8 139 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 CRLS1Q9UJA2 301 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 FZD4Q9ULV1 537 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 NOVA2Q9UNW9 492 aaKnown RBP10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 SIT1Q9Y3P8 196 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 FADS3Q9Y5Q0 445 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 COL4A3Q01955 1670 aa10.43□□□□□ -0.74
TMEM55B-205ENST00000554028 TBC1D3DA0A087WVF3 549 aa10.42□□□□□ -0.74
TMEM55B-205ENST00000554028 TBC1D3IA0A087WXS9 549 aa10.42□□□□□ -0.74
TMEM55B-205ENST00000554028 TBC1D3EA0A087X179 549 aa10.42□□□□□ -0.74
TMEM55B-205ENST00000554028 TBC1D3KA0A087X1G2 549 aa10.42□□□□□ -0.74
TMEM55B-205ENST00000554028 A0A0U1RQS6 177 aa10.42□□□□□ -0.74
TMEM55B-205ENST00000554028 TBC1D3FA6NER0 549 aaPredicted RBP10.42□□□□□ -0.74
TMEM55B-205ENST00000554028 TBC1D3LB9A6J9 549 aa10.42□□□□□ -0.74
TMEM55B-205ENST00000554028 F8W8V4 182 aa10.42□□□□□ -0.74
TMEM55B-205ENST00000554028 PLK4O00444 970 aa10.42□□□□□ -0.74
TMEM55B-205ENST00000554028 MMP20O60882 483 aa10.42□□□□□ -0.74
TMEM55B-205ENST00000554028 PIAS1O75925 651 aa10.42□□□□□ -0.74
TMEM55B-205ENST00000554028 TM7SF2O76062 418 aa10.42□□□□□ -0.74
TMEM55B-205ENST00000554028 PRAMEF1O95521 474 aa10.42□□□□□ -0.74
TMEM55B-205ENST00000554028 PYGLP06737 847 aa10.42□□□□□ -0.74
TMEM55B-205ENST00000554028 C1SP09871 688 aa10.42□□□□□ -0.74
TMEM55B-205ENST00000554028 TBC1D3HP0C7X1 549 aa10.42□□□□□ -0.74
TMEM55B-205ENST00000554028 ARNTP27540 789 aa10.42□□□□□ -0.74
TMEM55B-205ENST00000554028 DRD3P35462 400 aa10.42□□□□□ -0.74
TMEM55B-205ENST00000554028 SLC1A2P43004 574 aa10.42□□□□□ -0.74
TMEM55B-205ENST00000554028 MAGEA9P43362 315 aa10.42□□□□□ -0.74
TMEM55B-205ENST00000554028 LEPRP48357 1165 aaKnown RBP10.42□□□□□ -0.74
TMEM55B-205ENST00000554028 POLD2P49005 469 aa10.42□□□□□ -0.74
TMEM55B-205ENST00000554028 METAP1P53582 386 aa10.42□□□□□ -0.74
TMEM55B-205ENST00000554028 DCDC1P59894 354 aa10.42□□□□□ -0.74
TMEM55B-205ENST00000554028 RALGDSQ12967 914 aa10.42□□□□□ -0.74
TMEM55B-205ENST00000554028 SGCGQ13326 291 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms