RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 DTD2Q96FN9 168 aa14.47□□□□□ -0.09
SHMT2-210ENST00000553950 COQ10AQ96MF6 247 aa14.47□□□□□ -0.09
SHMT2-210ENST00000553950 WRAP53Q9BUR4 548 aaKnown RBP14.47□□□□□ -0.09
SHMT2-210ENST00000553950 PRMT8Q9NR22 394 aaPredicted RBP14.47□□□□□ -0.09
SHMT2-210ENST00000553950 CATSPERZQ9NTU4 200 aa14.47□□□□□ -0.09
SHMT2-210ENST00000553950 MOCS1Q9NZB8 636 aa14.47□□□□□ -0.09
SHMT2-210ENST00000553950 SERGEFQ9UGK8 458 aa14.47□□□□□ -0.09
SHMT2-210ENST00000553950 EML5Q05BV3 1969 aa14.47□□□□□ -0.09
SHMT2-210ENST00000553950 CCDC78A2IDD5 438 aa14.46□□□□□ -0.09
SHMT2-210ENST00000553950 FAM159BA6NKW6 160 aa14.46□□□□□ -0.09
SHMT2-210ENST00000553950 F8W8V4 182 aa14.46□□□□□ -0.09
SHMT2-210ENST00000553950 LAMTOR5O43504 91 aa14.46□□□□□ -0.09
SHMT2-210ENST00000553950 SEMA4FO95754 770 aa14.46□□□□□ -0.09
SHMT2-210ENST00000553950 BPIP17213 487 aa14.46□□□□□ -0.09
SHMT2-210ENST00000553950 CD6P30203 668 aa14.46□□□□□ -0.09
SHMT2-210ENST00000553950 MC4RP32245 332 aa14.46□□□□□ -0.09
SHMT2-210ENST00000553950 TTPAP49638 278 aa14.46□□□□□ -0.09
SHMT2-210ENST00000553950 TAS2R38P59533 333 aa14.46□□□□□ -0.09
SHMT2-210ENST00000553950 SLC29A2Q14542 456 aa14.46□□□□□ -0.09
SHMT2-210ENST00000553950 UAP1Q16222 522 aaPredicted RBP14.46□□□□□ -0.09
SHMT2-210ENST00000553950 ALS2CLQ60I27 953 aa14.46□□□□□ -0.09
SHMT2-210ENST00000553950 SNX20Q7Z614 316 aa14.46□□□□□ -0.09
SHMT2-210ENST00000553950 SDCCAG8Q86SQ7 713 aaPredicted RBP14.46□□□□□ -0.09
SHMT2-210ENST00000553950 NLRP8Q86W28 1048 aa14.46□□□□□ -0.09
SHMT2-210ENST00000553950 HORMAD1Q86X24 394 aa14.46□□□□□ -0.09
SHMT2-210ENST00000553950 LRRC6Q86X45 466 aa14.46□□□□□ -0.09
SHMT2-210ENST00000553950 TRAM1L1Q8N609 369 aa14.46□□□□□ -0.09
SHMT2-210ENST00000553950 GPR150Q8NGU9 434 aa14.46□□□□□ -0.09
SHMT2-210ENST00000553950 OR4L1Q8NH43 312 aa14.46□□□□□ -0.09
SHMT2-210ENST00000553950 HDAC10Q969S8 669 aa14.46□□□□□ -0.09
SHMT2-210ENST00000553950 CDKN2AIPNLQ96HQ2 116 aa14.46□□□□□ -0.09
SHMT2-210ENST00000553950 TCF12Q99081 682 aa14.46□□□□□ -0.09
SHMT2-210ENST00000553950 SLC6A17Q9H1V8 727 aa14.46□□□□□ -0.09
SHMT2-210ENST00000553950 FAM83DQ9H4H8 585 aa14.46□□□□□ -0.09
SHMT2-210ENST00000553950 SMOXQ9NWM0 555 aa14.46□□□□□ -0.09
SHMT2-210ENST00000553950 SLC2A6Q9UGQ3 507 aa14.46□□□□□ -0.09
SHMT2-210ENST00000553950 SLC24A2Q9UI40 661 aa14.46□□□□□ -0.09
SHMT2-210ENST00000553950 FKBPLQ9UIM3 349 aa14.46□□□□□ -0.09
SHMT2-210ENST00000553950 CORO1CQ9ULV4 474 aaPredicted RBP14.46□□□□□ -0.09
SHMT2-210ENST00000553950 CEP192Q8TEP8 1941 aa14.46□□□□□ -0.09
SHMT2-210ENST00000553950 KMT2EQ8IZD2 1858 aa14.46□□□□□ -0.1
SHMT2-210ENST00000553950 GOLGA6L10A6NI86 522 aa14.45□□□□□ -0.1
SHMT2-210ENST00000553950 A8MX80 341 aa14.45□□□□□ -0.1
SHMT2-210ENST00000553950 PLK4O00444 970 aa14.45□□□□□ -0.1
SHMT2-210ENST00000553950 AXIN1O15169 862 aa14.45□□□□□ -0.1
SHMT2-210ENST00000553950 ATP8B1O43520 1251 aa14.45□□□□□ -0.1
SHMT2-210ENST00000553950 RNGTTO60942 597 aaKnown RBP14.45□□□□□ -0.1
SHMT2-210ENST00000553950 SRP72O76094 671 aaKnown RBP14.45□□□□□ -0.1
SHMT2-210ENST00000553950 GOT2P00505 430 aaKnown RBP14.45□□□□□ -0.1
SHMT2-210ENST00000553950 INHBAP08476 426 aa14.45□□□□□ -0.1
SHMT2-210ENST00000553950 TEAD1P28347 426 aa14.45□□□□□ -0.1
SHMT2-210ENST00000553950 ARCN1P48444 511 aaKnown RBP14.45□□□□□ -0.1
SHMT2-210ENST00000553950 CCR5P51681 352 aa14.45□□□□□ -0.1
SHMT2-210ENST00000553950 TMPRSS15P98073 1019 aa14.45□□□□□ -0.1
SHMT2-210ENST00000553950 DPTQ07507 201 aa14.45□□□□□ -0.1
SHMT2-210ENST00000553950 SGCGQ13326 291 aa14.45□□□□□ -0.1
SHMT2-210ENST00000553950 USP39Q53GS9 565 aaKnown RBP14.45□□□□□ -0.1
SHMT2-210ENST00000553950 SETMARQ53H47 684 aaPredicted RBP14.45□□□□□ -0.1
SHMT2-210ENST00000553950 HENMT1Q5T8I9 393 aaKnown RBP14.45□□□□□ -0.1
SHMT2-210ENST00000553950 ZNF470Q6ECI4 717 aa14.45□□□□□ -0.1
SHMT2-210ENST00000553950 NEPROQ6NW34 567 aa14.45□□□□□ -0.1
SHMT2-210ENST00000553950 CES3Q6UWW8 571 aa14.45□□□□□ -0.1
SHMT2-210ENST00000553950 HSD11B1LQ7Z5J1 315 aa14.45□□□□□ -0.1
SHMT2-210ENST00000553950 CTAGE3PQ8IX95 158 aa14.45□□□□□ -0.1
SHMT2-210ENST00000553950 FBXL6Q8N531 539 aa14.45□□□□□ -0.1
SHMT2-210ENST00000553950 HEXDCQ8WVB3 486 aa14.45□□□□□ -0.1
SHMT2-210ENST00000553950 TBATAQ96M53 351 aa14.45□□□□□ -0.1
SHMT2-210ENST00000553950 ZNF778Q96MU6 729 aa14.45□□□□□ -0.1
SHMT2-210ENST00000553950 FCRL3Q96P31 734 aaPredicted RBP14.45□□□□□ -0.1
SHMT2-210ENST00000553950 SMIM14Q96QK8 99 aa14.45□□□□□ -0.1
SHMT2-210ENST00000553950 CPNE1Q99829 537 aa14.45□□□□□ -0.1
SHMT2-210ENST00000553950 FAM126AQ9BYI3 521 aaPredicted RBP14.45□□□□□ -0.1
SHMT2-210ENST00000553950 ROPN1BQ9BZX4 212 aaPredicted RBP14.45□□□□□ -0.1
SHMT2-210ENST00000553950 ZCCHC2Q9C0B9 1178 aaKnown RBP14.45□□□□□ -0.1
SHMT2-210ENST00000553950 EPB41L4BQ9H329 900 aa14.45□□□□□ -0.1
SHMT2-210ENST00000553950 ROPN1Q9HAT0 212 aaPredicted RBP14.45□□□□□ -0.1
SHMT2-210ENST00000553950 PLAC1Q9HBJ0 212 aa14.45□□□□□ -0.1
SHMT2-210ENST00000553950 INTS10Q9NVR2 710 aaKnown RBP14.45□□□□□ -0.1
SHMT2-210ENST00000553950 GGT7Q9UJ14 662 aa14.45□□□□□ -0.1
SHMT2-210ENST00000553950 CRLS1Q9UJA2 301 aa14.45□□□□□ -0.1
SHMT2-210ENST00000553950 CYP8B1Q9UNU6 501 aa14.45□□□□□ -0.1
SHMT2-210ENST00000553950 PLAAQ9Y263 795 aa14.45□□□□□ -0.1
SHMT2-210ENST00000553950 NUMA1Q14980 2115 aa14.45□□□□□ -0.1
SHMT2-210ENST00000553950 TBC1D3DA0A087WVF3 549 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 TBC1D3IA0A087WXS9 549 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 TBC1D3EA0A087X179 549 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 TBC1D3KA0A087X1G2 549 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 A0A1W2PQU0 124 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 CCDC162PA2VCL2 907 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 TBC1D3FA6NER0 549 aaPredicted RBP14.44□□□□□ -0.1
SHMT2-210ENST00000553950 TBC1D3LB9A6J9 549 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 K7ESF4 209 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 BUD23O43709 281 aaKnown RBP14.44□□□□□ -0.1
SHMT2-210ENST00000553950 MMP20O60882 483 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 NDUFS2O75306 463 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 CDH16O75309 829 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 TCEA3O75764 348 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 RECQL5O94762 991 aaPredicted RBP14.44□□□□□ -0.1
SHMT2-210ENST00000553950 PDGFBP01127 241 aaPredicted RBP14.44□□□□□ -0.1
SHMT2-210ENST00000553950 TBC1D3HP0C7X1 549 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms