RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 ARHGEF2Q92974 986 aaKnown RBP16.09■□□□□ 0.17
ACTN1-209ENST00000553659 VAT1Q99536 393 aa16.09■□□□□ 0.17
ACTN1-209ENST00000553659 EPN3Q9H201 632 aa16.09■□□□□ 0.17
ACTN1-209ENST00000553659 LRRC4CQ9HCJ2 640 aa16.09■□□□□ 0.17
ACTN1-209ENST00000553659 SLC31A1O15431 190 aa16.08■□□□□ 0.16
ACTN1-209ENST00000553659 MFSD11O43934 449 aa16.08■□□□□ 0.16
ACTN1-209ENST00000553659 MT-CO1P00395 513 aa16.08■□□□□ 0.16
ACTN1-209ENST00000553659 MT-CO3P00414 261 aa16.08■□□□□ 0.16
ACTN1-209ENST00000553659 CTSLP07711 333 aa16.08■□□□□ 0.16
ACTN1-209ENST00000553659 THEGLP0DJG4 465 aa16.08■□□□□ 0.16
ACTN1-209ENST00000553659 SRCP12931 536 aa16.08■□□□□ 0.16
ACTN1-209ENST00000553659 DGKAP23743 735 aa16.08■□□□□ 0.16
ACTN1-209ENST00000553659 STX2P32856 288 aa16.08■□□□□ 0.16
ACTN1-209ENST00000553659 SLCO1A2P46721 670 aa16.08■□□□□ 0.16
ACTN1-209ENST00000553659 GEMIN4P57678 1058 aaKnown RBP16.08■□□□□ 0.16
ACTN1-209ENST00000553659 BBS9Q3SYG4 887 aa16.08■□□□□ 0.16
ACTN1-209ENST00000553659 C14orf80Q86SX3 495 aa16.08■□□□□ 0.16
ACTN1-209ENST00000553659 CCNJLQ8IV13 435 aa16.08■□□□□ 0.16
ACTN1-209ENST00000553659 LSM14AQ8ND56 463 aaKnown RBP16.08■□□□□ 0.16
ACTN1-209ENST00000553659 FBXO36Q8NEA4 188 aa16.08■□□□□ 0.16
ACTN1-209ENST00000553659 TMIEQ8NEW7 156 aa16.08■□□□□ 0.16
ACTN1-209ENST00000553659 OR4C6Q8NH72 309 aa16.08■□□□□ 0.16
ACTN1-209ENST00000553659 PWWP2AQ96N64 755 aa16.08■□□□□ 0.16
ACTN1-209ENST00000553659 TKTL2Q9H0I9 626 aa16.08■□□□□ 0.16
ACTN1-209ENST00000553659 SIK2Q9H0K1 926 aa16.08■□□□□ 0.16
ACTN1-209ENST00000553659 MUC3BQ9H195 1237 aa16.08■□□□□ 0.16
ACTN1-209ENST00000553659 CATSPERBQ9H7T0 1116 aa16.08■□□□□ 0.16
ACTN1-209ENST00000553659 C10orf88Q9H8K7 445 aa16.08■□□□□ 0.16
ACTN1-209ENST00000553659 PSMC3IPQ9P2W1 217 aaPredicted RBP16.08■□□□□ 0.16
ACTN1-209ENST00000553659 A0A1W2PQU0 124 aa16.07■□□□□ 0.16
ACTN1-209ENST00000553659 CNTN5O94779 1100 aa16.07■□□□□ 0.16
ACTN1-209ENST00000553659 PRB1P04280 392 aa16.07■□□□□ 0.16
ACTN1-209ENST00000553659 ERCC2P18074 760 aa16.07■□□□□ 0.16
ACTN1-209ENST00000553659 DAB2P98082 770 aa16.07■□□□□ 0.16
ACTN1-209ENST00000553659 SLC10A2Q12908 348 aaPredicted RBP16.07■□□□□ 0.16
ACTN1-209ENST00000553659 PARP6Q2NL67 630 aa16.07■□□□□ 0.16
ACTN1-209ENST00000553659 ZNF284Q2VY69 593 aa16.07■□□□□ 0.16
ACTN1-209ENST00000553659 LRRC31Q6UY01 552 aa16.07■□□□□ 0.16
ACTN1-209ENST00000553659 HORMAD1Q86X24 394 aa16.07■□□□□ 0.16
ACTN1-209ENST00000553659 CCDC13Q8IYE1 715 aa16.07■□□□□ 0.16
ACTN1-209ENST00000553659 OR2A12Q8NGT7 310 aa16.07■□□□□ 0.16
ACTN1-209ENST00000553659 KLK6Q92876 244 aa16.07■□□□□ 0.16
ACTN1-209ENST00000553659 HDAC11Q96DB2 347 aa16.07■□□□□ 0.16
ACTN1-209ENST00000553659 FCRL3Q96P31 734 aaPredicted RBP16.07■□□□□ 0.16
ACTN1-209ENST00000553659 PPP1R2P1Q96PQ5 205 aa16.07■□□□□ 0.16
ACTN1-209ENST00000553659 CYTH2Q99418 400 aa16.07■□□□□ 0.16
ACTN1-209ENST00000553659 SELENOSQ9BQE4 189 aa16.07■□□□□ 0.16
ACTN1-209ENST00000553659 C2orf49Q9BVC5 232 aaPredicted RBP16.07■□□□□ 0.16
ACTN1-209ENST00000553659 CCDC134Q9H6E4 229 aa16.07■□□□□ 0.16
ACTN1-209ENST00000553659 ACSS3Q9H6R3 686 aa16.07■□□□□ 0.16
ACTN1-209ENST00000553659 ETNK1Q9HBU6 452 aa16.07■□□□□ 0.16
ACTN1-209ENST00000553659 UCKL1Q9NWZ5 548 aa16.07■□□□□ 0.16
ACTN1-209ENST00000553659 EURLQ9NYK6 297 aa16.07■□□□□ 0.16
ACTN1-209ENST00000553659 TRHDEQ9UKU6 1024 aa16.07■□□□□ 0.16
ACTN1-209ENST00000553659 BPTFQ12830 3046 aa16.06■□□□□ 0.16
ACTN1-209ENST00000553659 GOLGA8MH3BSY2 632 aa16.06■□□□□ 0.16
ACTN1-209ENST00000553659 K7ERQ8 282 aa16.06■□□□□ 0.16
ACTN1-209ENST00000553659 AP3B1O00203 1094 aa16.06■□□□□ 0.16
ACTN1-209ENST00000553659 KPNA3O00505 521 aaPredicted RBP16.06■□□□□ 0.16
ACTN1-209ENST00000553659 SNAP91O60641 907 aa16.06■□□□□ 0.16
ACTN1-209ENST00000553659 PRNPP04156 253 aa16.06■□□□□ 0.16
ACTN1-209ENST00000553659 RHOCP08134 193 aa16.06■□□□□ 0.16
ACTN1-209ENST00000553659 HNRNPA2B1P22626 353 aaKnown RBP16.06■□□□□ 0.16
ACTN1-209ENST00000553659 AKT2P31751 481 aa16.06■□□□□ 0.16
ACTN1-209ENST00000553659 SLC18A1P54219 525 aa16.06■□□□□ 0.16
ACTN1-209ENST00000553659 GUCY1A3Q02108 690 aa16.06■□□□□ 0.16
ACTN1-209ENST00000553659 PPIDQ08752 370 aaKnown RBP16.06■□□□□ 0.16
ACTN1-209ENST00000553659 GALNT2Q10471 571 aa16.06■□□□□ 0.16
ACTN1-209ENST00000553659 SKIDA1Q1XH10 827 aa16.06■□□□□ 0.16
ACTN1-209ENST00000553659 TBC1D25Q3MII6 688 aa16.06■□□□□ 0.16
ACTN1-209ENST00000553659 ALFQ53S48 1182 aa16.06■□□□□ 0.16
ACTN1-209ENST00000553659 ANKRD20A2Q5SQ80 823 aa16.06■□□□□ 0.16
ACTN1-209ENST00000553659 FNBP1LQ5T0N5 605 aa16.06■□□□□ 0.16
ACTN1-209ENST00000553659 ANKRD20A1Q5TYW2 823 aa16.06■□□□□ 0.16
ACTN1-209ENST00000553659 ANKRD20A3Q5VUR7 823 aa16.06■□□□□ 0.16
ACTN1-209ENST00000553659 ITPRIPL1Q6GPH6 555 aa16.06■□□□□ 0.16
ACTN1-209ENST00000553659 GPR155Q7Z3F1 870 aa16.06■□□□□ 0.16
ACTN1-209ENST00000553659 SETD3Q86TU7 594 aaPredicted RBP16.06■□□□□ 0.16
ACTN1-209ENST00000553659 EXOC3L1Q86VI1 746 aa16.06■□□□□ 0.16
ACTN1-209ENST00000553659 LRRC49Q8IUZ0 686 aa16.06■□□□□ 0.16
ACTN1-209ENST00000553659 FAM174AQ8TBP5 190 aa16.06■□□□□ 0.16
ACTN1-209ENST00000553659 CCDC110Q8TBZ0 833 aa16.06■□□□□ 0.16
ACTN1-209ENST00000553659 BCAS4Q8TDM0 211 aa16.06■□□□□ 0.16
ACTN1-209ENST00000553659 ARRDC3Q96B67 414 aa16.06■□□□□ 0.16
ACTN1-209ENST00000553659 MYOCQ99972 504 aa16.06■□□□□ 0.16
ACTN1-209ENST00000553659 NAT9Q9BTE0 207 aa16.06■□□□□ 0.16
ACTN1-209ENST00000553659 SSU72Q9NP77 194 aaKnown RBP16.06■□□□□ 0.16
ACTN1-209ENST00000553659 DYRK4Q9NR20 520 aa16.06■□□□□ 0.16
ACTN1-209ENST00000553659 INTS9Q9NV88 658 aaKnown RBP16.06■□□□□ 0.16
ACTN1-209ENST00000553659 OR12D3Q9UGF7 316 aa16.06■□□□□ 0.16
ACTN1-209ENST00000553659 VPS51Q9UID3 782 aa16.06■□□□□ 0.16
ACTN1-209ENST00000553659 TEX264Q9Y6I9 313 aa16.06■□□□□ 0.16
ACTN1-209ENST00000553659 TEX51A0A1B0GUA7 166 aa16.05■□□□□ 0.16
ACTN1-209ENST00000553659 ERI2A8K979 691 aaKnown RBP16.05■□□□□ 0.16
ACTN1-209ENST00000553659 FFAR2O15552 330 aa16.05■□□□□ 0.16
ACTN1-209ENST00000553659 SMAD6O43541 496 aaKnown RBP16.05■□□□□ 0.16
ACTN1-209ENST00000553659 PIAS2O75928 621 aa16.05■□□□□ 0.16
ACTN1-209ENST00000553659 C1QL1O75973 258 aa16.05■□□□□ 0.16
ACTN1-209ENST00000553659 APRTP07741 180 aa16.05■□□□□ 0.16
ACTN1-209ENST00000553659 GIMD1P0DJR0 217 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms