RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 IGFBP7Q16270 282 aa7.33□□□□□ -1.24
ATXN3-219ENST00000553488 KLHL40Q2TBA0 621 aa7.33□□□□□ -1.24
ATXN3-219ENST00000553488 WSCD2Q2TBF2 565 aa7.33□□□□□ -1.24
ATXN3-219ENST00000553488 ATXN7L2Q5T6C5 722 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-219ENST00000553488 ACBD5Q5T8D3 534 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-219ENST00000553488 BORAQ6PGQ7 559 aa7.33□□□□□ -1.24
ATXN3-219ENST00000553488 OGFOD3Q6PK18 319 aa7.33□□□□□ -1.24
ATXN3-219ENST00000553488 LRRC31Q6UY01 552 aa7.33□□□□□ -1.24
ATXN3-219ENST00000553488 ENOSF1Q7L5Y1 443 aa7.33□□□□□ -1.24
ATXN3-219ENST00000553488 NLRP14Q86W24 1093 aa7.33□□□□□ -1.24
ATXN3-219ENST00000553488 GKN2Q86XP6 184 aa7.33□□□□□ -1.24
ATXN3-219ENST00000553488 PTRH1Q86Y79 214 aaKnown RBP7.33□□□□□ -1.24
ATXN3-219ENST00000553488 HID1Q8IV36 788 aa7.33□□□□□ -1.24
ATXN3-219ENST00000553488 DRC7Q8IY82 874 aa7.33□□□□□ -1.24
ATXN3-219ENST00000553488 GIMAP7Q8NHV1 300 aa7.33□□□□□ -1.24
ATXN3-219ENST00000553488 TSACCQ96A04 125 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-219ENST00000553488 DHTKD1Q96HY7 919 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-219ENST00000553488 KLHL32Q96NJ5 620 aa7.33□□□□□ -1.24
ATXN3-219ENST00000553488 WRAP53Q9BUR4 548 aaKnown RBP7.33□□□□□ -1.24
ATXN3-219ENST00000553488 ZYG11BQ9C0D3 744 aa7.33□□□□□ -1.24
ATXN3-219ENST00000553488 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.33□□□□□ -1.24
ATXN3-219ENST00000553488 PPARGC1AQ9UBK2 798 aaKnown RBP7.33□□□□□ -1.24
ATXN3-219ENST00000553488 TUBD1Q9UJT1 453 aa7.33□□□□□ -1.24
ATXN3-219ENST00000553488 STAP1Q9ULZ2 295 aa7.33□□□□□ -1.24
ATXN3-219ENST00000553488 DGKBQ9Y6T7 804 aa7.33□□□□□ -1.24
ATXN3-219ENST00000553488 RNF215Q9Y6U7 377 aa7.33□□□□□ -1.24
ATXN3-219ENST00000553488 MED13Q9UHV7 2174 aa7.33□□□□□ -1.24
ATXN3-219ENST00000553488 ESPL1Q14674 2120 aa7.33□□□□□ -1.24
ATXN3-219ENST00000553488 TSPAN11A1L157 253 aa7.32□□□□□ -1.24
ATXN3-219ENST00000553488 STMND1H3BQB6 276 aa7.32□□□□□ -1.24
ATXN3-219ENST00000553488 KRIT1O00522 736 aa7.32□□□□□ -1.24
ATXN3-219ENST00000553488 NUDT21O43809 227 aaKnown RBP7.32□□□□□ -1.24
ATXN3-219ENST00000553488 SRGAP2O75044 1071 aa7.32□□□□□ -1.24
ATXN3-219ENST00000553488 CCL4P13236 92 aa7.32□□□□□ -1.24
ATXN3-219ENST00000553488 LIFP15018 202 aa7.32□□□□□ -1.24
ATXN3-219ENST00000553488 CDH5P33151 784 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-219ENST00000553488 SRP54P61011 504 aaKnown RBP7.32□□□□□ -1.24
ATXN3-219ENST00000553488 SNRPD1P62314 119 aaKnown RBP7.32□□□□□ -1.24
ATXN3-219ENST00000553488 B4GALNT1Q00973 533 aa7.32□□□□□ -1.24
ATXN3-219ENST00000553488 SERINC3Q13530 473 aa7.32□□□□□ -1.24
ATXN3-219ENST00000553488 NR1D2Q14995 579 aa7.32□□□□□ -1.24
ATXN3-219ENST00000553488 MYLK3Q32MK0 819 aa7.32□□□□□ -1.24
ATXN3-219ENST00000553488 SLC25A52Q3SY17 297 aa7.32□□□□□ -1.24
ATXN3-219ENST00000553488 TMEM52BQ4KMG9 183 aa7.32□□□□□ -1.24
ATXN3-219ENST00000553488 C14orf28Q4W4Y0 310 aa7.32□□□□□ -1.24
ATXN3-219ENST00000553488 RAB6CQ53S08 254 aa7.32□□□□□ -1.24
ATXN3-219ENST00000553488 GDPD4Q6W3E5 623 aa7.32□□□□□ -1.24
ATXN3-219ENST00000553488 XYLT1Q86Y38 959 aa7.32□□□□□ -1.24
ATXN3-219ENST00000553488 ZDHHC17Q8IUH5 632 aa7.32□□□□□ -1.24
ATXN3-219ENST00000553488 HSCBQ8IWL3 235 aa7.32□□□□□ -1.24
ATXN3-219ENST00000553488 RYBPQ8N488 228 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-219ENST00000553488 FAM26EQ8N5C1 309 aa7.32□□□□□ -1.24
ATXN3-219ENST00000553488 Q8N9G6 341 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-219ENST00000553488 RNF214Q8ND24 703 aa7.32□□□□□ -1.24
ATXN3-219ENST00000553488 CXorf40AQ8TE69 158 aa7.32□□□□□ -1.24
ATXN3-219ENST00000553488 JPH3Q8WXH2 748 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-219ENST00000553488 OR1E3Q8WZA6 343 aa7.32□□□□□ -1.24
ATXN3-219ENST00000553488 SMARCE1Q969G3 411 aa7.32□□□□□ -1.24
ATXN3-219ENST00000553488 NKD1Q969G9 470 aa7.32□□□□□ -1.24
ATXN3-219ENST00000553488 FUBP1Q96AE4 644 aaKnown RBP7.32□□□□□ -1.24
ATXN3-219ENST00000553488 HAPLN3Q96S86 360 aa7.32□□□□□ -1.24
ATXN3-219ENST00000553488 CMKLR1Q99788 373 aa7.32□□□□□ -1.24
ATXN3-219ENST00000553488 APOOQ9BUR5 198 aa7.32□□□□□ -1.24
ATXN3-219ENST00000553488 C1QTNF7Q9BXJ2 289 aa7.32□□□□□ -1.24
ATXN3-219ENST00000553488 SCAND2PQ9GZW5 306 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-219ENST00000553488 RAB6CQ9H0N0 254 aa7.32□□□□□ -1.24
ATXN3-219ENST00000553488 FGF22Q9HCT0 170 aa7.32□□□□□ -1.24
ATXN3-219ENST00000553488 PLCB1Q9NQ66 1216 aa7.32□□□□□ -1.24
ATXN3-219ENST00000553488 DKK3Q9UBP4 350 aa7.32□□□□□ -1.24
ATXN3-219ENST00000553488 KLQ9UEF7 1012 aa7.32□□□□□ -1.24
ATXN3-219ENST00000553488 ANAPC2Q9UJX6 822 aa7.32□□□□□ -1.24
ATXN3-219ENST00000553488 COQ6Q9Y2Z9 468 aa7.32□□□□□ -1.24
ATXN3-219ENST00000553488 OR1A2Q9Y585 309 aa7.32□□□□□ -1.24
ATXN3-219ENST00000553488 PAXBP1Q9Y5B6 917 aa7.32□□□□□ -1.24
ATXN3-219ENST00000553488 PCDHGA3Q9Y5H0 932 aa7.32□□□□□ -1.24
ATXN3-219ENST00000553488 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.32□□□□□ -1.24
ATXN3-219ENST00000553488 TMEM202A6NGA9 273 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 TMEM110-MUSTN1A8MSY1 372 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 HGSO14964 777 aaPredicted RBP7.31□□□□□ -1.24
ATXN3-219ENST00000553488 TMCC1O94876 653 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 SMC2O95347 1197 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 POP4O95707 220 aaKnown RBP7.31□□□□□ -1.24
ATXN3-219ENST00000553488 F9P00740 461 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 HSP90AA1P07900 732 aaKnown RBP7.31□□□□□ -1.24
ATXN3-219ENST00000553488 PNMA6AP0CW24 399 aaPredicted RBP7.31□□□□□ -1.24
ATXN3-219ENST00000553488 FGF3P11487 239 aaPredicted RBP7.31□□□□□ -1.24
ATXN3-219ENST00000553488 CTSEP14091 401 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 SLC9A1P19634 815 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 UGT1A3P35503 534 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 ETFBP38117 255 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 MMP12P39900 470 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 GABRB2P47870 512 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 MAPKAPK2P49137 400 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 GEMIN4P57678 1058 aaKnown RBP7.31□□□□□ -1.24
ATXN3-219ENST00000553488 KIAA1024LP59773 190 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 RNASE9P60153 205 aaKnown RBP7.31□□□□□ -1.24
ATXN3-219ENST00000553488 STIM1Q13586 685 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 LRRC14Q15048 493 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 POLD3Q15054 466 aaPredicted RBP7.31□□□□□ -1.24
ATXN3-219ENST00000553488 ARHGAP44Q17R89 818 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms