RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 VNN2O95498 520 aa5.22□□□□□ -1.57
SYNE2-210ENST00000553455 TMEM191BP0C7N4 346 aa5.22□□□□□ -1.57
SYNE2-210ENST00000553455 NAGAP17050 411 aa5.22□□□□□ -1.57
SYNE2-210ENST00000553455 RRM1P23921 792 aa5.22□□□□□ -1.57
SYNE2-210ENST00000553455 HOXC9P31274 260 aa5.22□□□□□ -1.57
SYNE2-210ENST00000553455 RFX2P48378 723 aa5.22□□□□□ -1.57
SYNE2-210ENST00000553455 MRPS5P82675 430 aaKnown RBP5.22□□□□□ -1.57
SYNE2-210ENST00000553455 GPS2Q13227 327 aa5.22□□□□□ -1.57
SYNE2-210ENST00000553455 NTRK2Q16620 822 aa5.22□□□□□ -1.57
SYNE2-210ENST00000553455 RARS2Q5T160 578 aaKnown RBP5.22□□□□□ -1.57
SYNE2-210ENST00000553455 OTUD1Q5VV17 481 aaPredicted RBP5.22□□□□□ -1.57
SYNE2-210ENST00000553455 GGNBP1Q5YKI7 109 aa5.22□□□□□ -1.57
SYNE2-210ENST00000553455 SLC30A6Q6NXT4 461 aa5.22□□□□□ -1.57
SYNE2-210ENST00000553455 PDXDC1Q6P996 788 aa5.22□□□□□ -1.57
SYNE2-210ENST00000553455 KRBA2Q6ZNG9 492 aa5.22□□□□□ -1.57
SYNE2-210ENST00000553455 KRT74Q7RTS7 529 aa5.22□□□□□ -1.57
SYNE2-210ENST00000553455 LRRC59Q96AG4 307 aaKnown RBP5.22□□□□□ -1.57
SYNE2-210ENST00000553455 HARBI1Q96MB7 349 aa5.22□□□□□ -1.57
SYNE2-210ENST00000553455 PIGMQ9H3S5 423 aa5.22□□□□□ -1.57
SYNE2-210ENST00000553455 GIMAP4Q9NUV9 329 aa5.22□□□□□ -1.57
SYNE2-210ENST00000553455 POT1Q9NUX5 634 aa5.22□□□□□ -1.57
SYNE2-210ENST00000553455 IL36RNQ9UBH0 155 aa5.22□□□□□ -1.57
SYNE2-210ENST00000553455 FBXW11Q9UKB1 542 aa5.22□□□□□ -1.57
SYNE2-210ENST00000553455 CDC14AQ9UNH5 594 aa5.22□□□□□ -1.57
SYNE2-210ENST00000553455 A0A1B0GVM2 712 aa5.21□□□□□ -1.58
SYNE2-210ENST00000553455 A0A1B0GVT2 93 aa5.21□□□□□ -1.58
SYNE2-210ENST00000553455 GLOD5A6NK44 160 aa5.21□□□□□ -1.58
SYNE2-210ENST00000553455 INAFM1C9JVW0 142 aa5.21□□□□□ -1.58
SYNE2-210ENST00000553455 VWA5AO00534 786 aa5.21□□□□□ -1.58
SYNE2-210ENST00000553455 TNFRSF13BO14836 293 aaPredicted RBP5.21□□□□□ -1.58
SYNE2-210ENST00000553455 ZIC3O60481 467 aa5.21□□□□□ -1.58
SYNE2-210ENST00000553455 TOMM40O96008 361 aa5.21□□□□□ -1.58
SYNE2-210ENST00000553455 ICAM1P05362 532 aa5.21□□□□□ -1.58
SYNE2-210ENST00000553455 ACTN1P12814 892 aa5.21□□□□□ -1.58
SYNE2-210ENST00000553455 DDX5P17844 614 aaKnown RBP5.21□□□□□ -1.58
SYNE2-210ENST00000553455 MXI1P50539 228 aa5.21□□□□□ -1.58
SYNE2-210ENST00000553455 PNLIPRP2P54317 469 aa5.21□□□□□ -1.58
SYNE2-210ENST00000553455 RAD23BP54727 409 aa5.21□□□□□ -1.58
SYNE2-210ENST00000553455 LRMPQ12912 555 aa5.21□□□□□ -1.58
SYNE2-210ENST00000553455 LEXMQ3ZCV2 418 aa5.21□□□□□ -1.58
SYNE2-210ENST00000553455 BMP2KLQ5H9B9 411 aa5.21□□□□□ -1.58
SYNE2-210ENST00000553455 PPP6R3Q5H9R7 873 aaPredicted RBP5.21□□□□□ -1.58
SYNE2-210ENST00000553455 DNTTIP2Q5QJE6 756 aaKnown RBP5.21□□□□□ -1.58
SYNE2-210ENST00000553455 FNBP1LQ5T0N5 605 aa5.21□□□□□ -1.58
SYNE2-210ENST00000553455 GARNL3Q5VVW2 1013 aa5.21□□□□□ -1.58
SYNE2-210ENST00000553455 SIGIRRQ6IA17 410 aa5.21□□□□□ -1.58
SYNE2-210ENST00000553455 DPY19L2P1Q6NXN4 242 aa5.21□□□□□ -1.58
SYNE2-210ENST00000553455 RPUSD3Q6P087 351 aaKnown RBP5.21□□□□□ -1.58
SYNE2-210ENST00000553455 ADGRA1Q86SQ6 560 aa5.21□□□□□ -1.58
SYNE2-210ENST00000553455 AACSQ86V21 672 aa5.21□□□□□ -1.58
SYNE2-210ENST00000553455 OR8K5Q8NH50 307 aa5.21□□□□□ -1.58
SYNE2-210ENST00000553455 PRPF31Q8WWY3 499 aaKnown RBP5.21□□□□□ -1.58
SYNE2-210ENST00000553455 ABHD1Q96SE0 405 aa5.21□□□□□ -1.58
SYNE2-210ENST00000553455 HRH4Q9H3N8 390 aa5.21□□□□□ -1.58
SYNE2-210ENST00000553455 ACSS1Q9NUB1 689 aaPredicted RBP5.21□□□□□ -1.58
SYNE2-210ENST00000553455 NFKBIL1Q9UBC1 381 aaPredicted RBP5.21□□□□□ -1.58
SYNE2-210ENST00000553455 COPG2Q9UBF2 871 aa5.21□□□□□ -1.58
SYNE2-210ENST00000553455 MORF4L1Q9UBU8 362 aa5.21□□□□□ -1.58
SYNE2-210ENST00000553455 TINAGQ9UJW2 476 aa5.21□□□□□ -1.58
SYNE2-210ENST00000553455 INSL5Q9Y5Q6 135 aa5.21□□□□□ -1.58
SYNE2-210ENST00000553455 FAM169AQ9Y6X4 670 aa5.21□□□□□ -1.58
SYNE2-210ENST00000553455 TCERG1O14776 1098 aaKnown RBP5.2□□□□□ -1.58
SYNE2-210ENST00000553455 ADAMDEC1O15204 470 aa5.2□□□□□ -1.58
SYNE2-210ENST00000553455 ZNF500O60304 480 aaPredicted RBP5.2□□□□□ -1.58
SYNE2-210ENST00000553455 CSPG5O95196 566 aa5.2□□□□□ -1.58
SYNE2-210ENST00000553455 TRIM21P19474 475 aaKnown RBP5.2□□□□□ -1.58
SYNE2-210ENST00000553455 SAT1P21673 171 aa5.2□□□□□ -1.58
SYNE2-210ENST00000553455 UBA1P22314 1058 aaKnown RBP5.2□□□□□ -1.58
SYNE2-210ENST00000553455 RPL3P39023 403 aaKnown RBP5.2□□□□□ -1.58
SYNE2-210ENST00000553455 PRCPP42785 496 aa5.2□□□□□ -1.58
SYNE2-210ENST00000553455 SUOXP51687 545 aa5.2□□□□□ -1.58
SYNE2-210ENST00000553455 GPR143P51810 404 aa5.2□□□□□ -1.58
SYNE2-210ENST00000553455 NUDT6P53370 316 aa5.2□□□□□ -1.58
SYNE2-210ENST00000553455 ABATP80404 500 aa5.2□□□□□ -1.58
SYNE2-210ENST00000553455 SPOCK1Q08629 439 aa5.2□□□□□ -1.58
SYNE2-210ENST00000553455 PNLIPRP3Q17RR3 467 aa5.2□□□□□ -1.58
SYNE2-210ENST00000553455 ZNF805Q5CZA5 627 aa5.2□□□□□ -1.58
SYNE2-210ENST00000553455 FSCBQ5H9T9 825 aa5.2□□□□□ -1.58
SYNE2-210ENST00000553455 GPR139Q6DWJ6 353 aa5.2□□□□□ -1.58
SYNE2-210ENST00000553455 NAA16Q6N069 864 aaPredicted RBP5.2□□□□□ -1.58
SYNE2-210ENST00000553455 CACNA2D4Q7Z3S7 1137 aa5.2□□□□□ -1.58
SYNE2-210ENST00000553455 IRF2BP2Q7Z5L9 587 aa5.2□□□□□ -1.58
SYNE2-210ENST00000553455 SDCCAG8Q86SQ7 713 aaPredicted RBP5.2□□□□□ -1.58
SYNE2-210ENST00000553455 GRAMD2BQ96HH9 432 aa5.2□□□□□ -1.58
SYNE2-210ENST00000553455 LRFN5Q96NI6 719 aa5.2□□□□□ -1.58
SYNE2-210ENST00000553455 PAFAH2Q99487 392 aa5.2□□□□□ -1.58
SYNE2-210ENST00000553455 SH3GL2Q99962 352 aa5.2□□□□□ -1.58
SYNE2-210ENST00000553455 C1QTNF1Q9BXJ1 281 aa5.2□□□□□ -1.58
SYNE2-210ENST00000553455 EBF3Q9H4W6 596 aa5.2□□□□□ -1.58
SYNE2-210ENST00000553455 SEBOXQ9HB31 216 aaPredicted RBP5.2□□□□□ -1.58
SYNE2-210ENST00000553455 CNGB3Q9NQW8 809 aa5.2□□□□□ -1.58
SYNE2-210ENST00000553455 EXO1Q9UQ84 846 aaKnown RBP5.2□□□□□ -1.58
SYNE2-210ENST00000553455 MAGED1Q9Y5V3 778 aaPredicted RBP5.2□□□□□ -1.58
SYNE2-210ENST00000553455 PTGDR2Q9Y5Y4 395 aa5.2□□□□□ -1.58
SYNE2-210ENST00000553455 NDUFS7O75251 213 aa5.19□□□□□ -1.58
SYNE2-210ENST00000553455 DDNO94850 711 aaPredicted RBP5.19□□□□□ -1.58
SYNE2-210ENST00000553455 HIST1H2ABP04908 130 aa5.19□□□□□ -1.58
SYNE2-210ENST00000553455 MMP9P14780 707 aa5.19□□□□□ -1.58
SYNE2-210ENST00000553455 HIST1H2ADP20671 130 aa5.19□□□□□ -1.58
SYNE2-210ENST00000553455 NR4A2P43354 598 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms