RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 LRRC69Q6ZNQ3 347 aa12.91□□□□□ -0.34
ACTN1-207ENST00000553290 RFLNAQ6ZTI6 216 aa12.91□□□□□ -0.34
ACTN1-207ENST00000553290 NT5DC3Q86UY8 548 aa12.91□□□□□ -0.34
ACTN1-207ENST00000553290 KIAA1524Q8TCG1 905 aa12.91□□□□□ -0.34
ACTN1-207ENST00000553290 CCHCR1Q8TD31 782 aa12.91□□□□□ -0.34
ACTN1-207ENST00000553290 CALR3Q96L12 384 aaKnown RBP12.91□□□□□ -0.34
ACTN1-207ENST00000553290 ZNF578Q96N58 590 aaPredicted RBP12.91□□□□□ -0.34
ACTN1-207ENST00000553290 SMIM14Q96QK8 99 aa12.91□□□□□ -0.34
ACTN1-207ENST00000553290 PANX2Q96RD6 677 aa12.91□□□□□ -0.34
ACTN1-207ENST00000553290 SLC25A51Q9H1U9 297 aa12.91□□□□□ -0.34
ACTN1-207ENST00000553290 DPEP2Q9H4A9 486 aa12.91□□□□□ -0.34
ACTN1-207ENST00000553290 SEPT10Q9P0V9 454 aa12.91□□□□□ -0.34
ACTN1-207ENST00000553290 SUFUQ9UMX1 484 aa12.91□□□□□ -0.34
ACTN1-207ENST00000553290 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.91□□□□□ -0.34
ACTN1-207ENST00000553290 ENTPD2Q9Y5L3 495 aa12.91□□□□□ -0.34
ACTN1-207ENST00000553290 ARHGEF17Q96PE2 2063 aaPredicted RBP12.9□□□□□ -0.34
ACTN1-207ENST00000553290 C1orf232A0A0U1RR37 186 aa12.9□□□□□ -0.34
ACTN1-207ENST00000553290 RGSL1A5PLK6 1076 aa12.9□□□□□ -0.34
ACTN1-207ENST00000553290 B4DGG1 531 aa12.9□□□□□ -0.34
ACTN1-207ENST00000553290 TMX2-CTNND1H3BSU7 103 aa12.9□□□□□ -0.34
ACTN1-207ENST00000553290 NOBOXO60393 691 aa12.9□□□□□ -0.34
ACTN1-207ENST00000553290 CST8O60676 142 aa12.9□□□□□ -0.34
ACTN1-207ENST00000553290 ZRANB2O95218 330 aaKnown RBP eCLIP12.9□□□□□ -0.34
ACTN1-207ENST00000553290 SOD1P00441 154 aa12.9□□□□□ -0.34
ACTN1-207ENST00000553290 FUCA1P04066 466 aa12.9□□□□□ -0.34
ACTN1-207ENST00000553290 MPOP05164 745 aa12.9□□□□□ -0.34
ACTN1-207ENST00000553290 PNLIPP16233 465 aa12.9□□□□□ -0.34
ACTN1-207ENST00000553290 ABCG1P45844 678 aa12.9□□□□□ -0.34
ACTN1-207ENST00000553290 GNPDA1P46926 289 aa12.9□□□□□ -0.34
ACTN1-207ENST00000553290 ERVPABLB-1P60509 514 aa12.9□□□□□ -0.34
ACTN1-207ENST00000553290 QPCTQ16769 361 aa12.9□□□□□ -0.34
ACTN1-207ENST00000553290 C14orf28Q4W4Y0 310 aa12.9□□□□□ -0.34
ACTN1-207ENST00000553290 TEX44Q53QW1 395 aa12.9□□□□□ -0.34
ACTN1-207ENST00000553290 TFDP3Q5H9I0 405 aa12.9□□□□□ -0.34
ACTN1-207ENST00000553290 CERCAMQ5T4B2 595 aa12.9□□□□□ -0.34
ACTN1-207ENST00000553290 C11orf63Q6NUN7 778 aa12.9□□□□□ -0.34
ACTN1-207ENST00000553290 IGF2-ASQ6U949 168 aa12.9□□□□□ -0.34
ACTN1-207ENST00000553290 SPOCD1Q6ZMY3 1216 aa12.9□□□□□ -0.34
ACTN1-207ENST00000553290 TMTC1Q8IUR5 882 aa12.9□□□□□ -0.34
ACTN1-207ENST00000553290 KATNAL2Q8IYT4 538 aa12.9□□□□□ -0.34
ACTN1-207ENST00000553290 RCOR2Q8IZ40 523 aa12.9□□□□□ -0.34
ACTN1-207ENST00000553290 EXD1Q8NHP7 514 aa12.9□□□□□ -0.34
ACTN1-207ENST00000553290 CCL4L1Q8NHW4 92 aa12.9□□□□□ -0.34
ACTN1-207ENST00000553290 SCAMP4Q969E2 229 aa12.9□□□□□ -0.34
ACTN1-207ENST00000553290 IMP4Q96G21 291 aaKnown RBP12.9□□□□□ -0.34
ACTN1-207ENST00000553290 SCARF2Q96GP6 870 aaPredicted RBP12.9□□□□□ -0.34
ACTN1-207ENST00000553290 ATXN7L3BQ96GX2 97 aa12.9□□□□□ -0.34
ACTN1-207ENST00000553290 HIC2Q96JB3 615 aa12.9□□□□□ -0.34
ACTN1-207ENST00000553290 AGAP3Q96P47 875 aa12.9□□□□□ -0.34
ACTN1-207ENST00000553290 GFM1Q96RP9 751 aaKnown RBP12.9□□□□□ -0.34
ACTN1-207ENST00000553290 RIOK2Q9BVS4 552 aaKnown RBP12.9□□□□□ -0.34
ACTN1-207ENST00000553290 RBSNQ9H1K0 784 aa12.9□□□□□ -0.34
ACTN1-207ENST00000553290 SUDS3Q9H7L9 328 aaPredicted RBP12.9□□□□□ -0.34
ACTN1-207ENST00000553290 SYNDIG1Q9H7V2 258 aa12.9□□□□□ -0.34
ACTN1-207ENST00000553290 PKD2L2Q9NZM6 624 aa12.9□□□□□ -0.34
ACTN1-207ENST00000553290 RABGEF1Q9UJ41 708 aa12.9□□□□□ -0.34
ACTN1-207ENST00000553290 APPL1Q9UKG1 709 aa12.9□□□□□ -0.34
ACTN1-207ENST00000553290 RALYQ9UKM9 306 aaKnown RBP12.9□□□□□ -0.34
ACTN1-207ENST00000553290 EPN1Q9Y6I3 576 aaPredicted RBP12.9□□□□□ -0.34
ACTN1-207ENST00000553290 NUDT21O43809 227 aaKnown RBP12.89□□□□□ -0.35
ACTN1-207ENST00000553290 NDUFA10O95299 355 aa12.89□□□□□ -0.35
ACTN1-207ENST00000553290 IPO7O95373 1038 aaKnown RBP12.89□□□□□ -0.35
ACTN1-207ENST00000553290 ADCY8P40145 1251 aa12.89□□□□□ -0.35
ACTN1-207ENST00000553290 POLD2P49005 469 aa12.89□□□□□ -0.35
ACTN1-207ENST00000553290 SPINT3P49223 89 aa12.89□□□□□ -0.35
ACTN1-207ENST00000553290 CCL7P80098 99 aa12.89□□□□□ -0.35
ACTN1-207ENST00000553290 HLTFQ14527 1009 aaKnown RBP eCLIP12.89□□□□□ -0.35
ACTN1-207ENST00000553290 PRKD1Q15139 912 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-207ENST00000553290 C3orf38Q5JPI3 329 aa12.89□□□□□ -0.35
ACTN1-207ENST00000553290 KAZNQ674X7 775 aa12.89□□□□□ -0.35
ACTN1-207ENST00000553290 DOK6Q6PKX4 331 aa12.89□□□□□ -0.35
ACTN1-207ENST00000553290 DAAM2Q86T65 1068 aa12.89□□□□□ -0.35
ACTN1-207ENST00000553290 NRROSQ86YC3 692 aa12.89□□□□□ -0.35
ACTN1-207ENST00000553290 WDR36Q8NI36 951 aaKnown RBP12.89□□□□□ -0.35
ACTN1-207ENST00000553290 TFB1MQ8WVM0 346 aaKnown RBP12.89□□□□□ -0.35
ACTN1-207ENST00000553290 P3H4Q92791 437 aa12.89□□□□□ -0.35
ACTN1-207ENST00000553290 TADA1Q96BN2 335 aa12.89□□□□□ -0.35
ACTN1-207ENST00000553290 COX14Q96I36 57 aa12.89□□□□□ -0.35
ACTN1-207ENST00000553290 RBM41Q96IZ5 413 aaKnown RBP12.89□□□□□ -0.35
ACTN1-207ENST00000553290 TRIB3Q96RU7 358 aa12.89□□□□□ -0.35
ACTN1-207ENST00000553290 AGAP2Q99490 1192 aa12.89□□□□□ -0.35
ACTN1-207ENST00000553290 CEP41Q9BYV8 373 aa12.89□□□□□ -0.35
ACTN1-207ENST00000553290 CDH19Q9H159 772 aa12.89□□□□□ -0.35
ACTN1-207ENST00000553290 LRRN3Q9H3W5 708 aa12.89□□□□□ -0.35
ACTN1-207ENST00000553290 GOLPH3Q9H4A6 298 aa12.89□□□□□ -0.35
ACTN1-207ENST00000553290 GLOD4Q9HC38 313 aa12.89□□□□□ -0.35
ACTN1-207ENST00000553290 THSD1Q9NS62 852 aa12.89□□□□□ -0.35
ACTN1-207ENST00000553290 SPATS2LQ9NUQ6 558 aaKnown RBP12.89□□□□□ -0.35
ACTN1-207ENST00000553290 TAAR2Q9P1P5 351 aa12.89□□□□□ -0.35
ACTN1-207ENST00000553290 LRIT1Q9P2V4 623 aa12.89□□□□□ -0.35
ACTN1-207ENST00000553290 SATB2Q9UPW6 733 aa12.89□□□□□ -0.35
ACTN1-207ENST00000553290 PCDHGA8Q9Y5G5 932 aa12.89□□□□□ -0.35
ACTN1-207ENST00000553290 ZFYVE26Q68DK2 2539 aa12.89□□□□□ -0.35
ACTN1-207ENST00000553290 hCG_1818297A0A087WSY0 165 aa12.88□□□□□ -0.35
ACTN1-207ENST00000553290 CCDC187A0A096LP49 1063 aa12.88□□□□□ -0.35
ACTN1-207ENST00000553290 A0A1W2PQM1 296 aa12.88□□□□□ -0.35
ACTN1-207ENST00000553290 D6RAR5 112 aa12.88□□□□□ -0.35
ACTN1-207ENST00000553290 ZW10O43264 779 aa12.88□□□□□ -0.35
ACTN1-207ENST00000553290 MTSS1O43312 755 aa12.88□□□□□ -0.35
ACTN1-207ENST00000553290 FGF1P05230 155 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms