RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-223	ENST00000551260	DNA2	P51530	1060 aa		5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	KCNK10	P57789	538 aa		5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	NUCB2	P80303	420 aa		5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	LAMB3	Q13751	1172 aa		5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	INPP5A	Q14642	412 aa		5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	LLGL1	Q15334	1064 aa		5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	CLPP	Q16740	277 aa	Predicted RBP	5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	SGSM1	Q2NKQ1	1148 aa		5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	GOLGA7B	Q2TAP0	167 aa		5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	ZC3H12A	Q5D1E8	599 aa	Known RBP	5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	ACAD11	Q709F0	780 aa		5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	TAC4	Q86UU9	113 aa		5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	CEP97	Q8IW35	865 aa		5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	SLC4A11	Q8NBS3	891 aa		5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	PLA2G15	Q8NCC3	412 aa		5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	OR6K2	Q8NGY2	324 aa		5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	UBA3	Q8TBC4	463 aa		5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	KIAA1524	Q8TCG1	905 aa		5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	DQX1	Q8TE96	717 aa	Known RBP	5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	CHTF18	Q8WVB6	975 aa		5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	THAP4	Q8WY91	577 aa		5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	TAF4B	Q92750	862 aa		5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	ARSG	Q96EG1	525 aa		5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	C14orf79	Q96F83	325 aa		5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	DMRTB1	Q96MA1	342 aa		5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	SMAD5	Q99717	465 aa	Known RBP	5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	PRMT1	Q99873	361 aa	Known RBP	5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	TMEM121	Q9BTD3	319 aa		5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	CXXC4	Q9H2H0	198 aa		5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	LRRC4	Q9HBW1	653 aa		5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	KIAA1586	Q9HCI6	787 aa		5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	AGPAT3	Q9NRZ7	376 aa		5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	FGF21	Q9NSA1	209 aa		5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	PANK4	Q9NVE7	773 aa		5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	SIDT1	Q9NXL6	827 aa	Known RBP	5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	GPR83	Q9NYM4	423 aa		5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	USP25	Q9UHP3	1055 aa		5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	MOSPD1	Q9UJG1	213 aa		5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	TLR6	Q9Y2C9	796 aa		5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	CSAG2	Q9Y5P2	127 aa		5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	ST14	Q9Y5Y6	855 aa		5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	DGKB	Q9Y6T7	804 aa		5.91	□□□□□ -1.46
RACGAP1-223	ENST00000551260	TRBV23OR9-2	A0A075B6M9	112 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	FRMD3	A2A2Y4	597 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	TCAF2	A6NFQ2	919 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	C16orf96	A6NNT2	1141 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	TMEM110-MUSTN1	A8MSY1	372 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	EIF1AY	O14602	144 aa	Known RBP	5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	XPO1	O14980	1071 aa	Known RBP	5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	AREL1	O15033	823 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	NDUFA10	O95299	355 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	HLA-DRA	P01903	254 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	LTF	P02788	710 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	PCCB	P05166	539 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	ESRRA	P11474	423 aa	Predicted RBP	5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	HTR1B	P28222	390 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	PIK3CA	P42336	1068 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	GPR3	P46089	330 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	CCNH	P51946	323 aa	Predicted RBP	5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	RAD23B	P54727	409 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	PITX1	P78337	314 aa	Predicted RBP	5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	BIRC2	Q13490	618 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	SQSTM1	Q13501	440 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	ALCAM	Q13740	583 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	LRRC14	Q15048	493 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	KYNU	Q16719	465 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	SPRED3	Q2MJR0	410 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	RASGRP3	Q8IV61	690 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	NELFCD	Q8IXH7	590 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	SIX6OS1	Q8N1H7	587 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	ZNF808	Q8N4W9	903 aa	Predicted RBP	5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	ANKRD52	Q8NB46	1076 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	XXYLT1	Q8NBI6	393 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	CXorf40A	Q8TE69	158 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	GRHL3	Q8TE85	626 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	PARD3B	Q8TEW8	1205 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	RELT	Q969Z4	430 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	VOPP1	Q96AW1	172 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	EPSTI1	Q96J88	318 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	HEPH	Q9BQS7	1158 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	TM6SF2	Q9BZW4	377 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	LIN7B	Q9HAP6	207 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	ZBTB20	Q9HC78	741 aa	Predicted RBP	5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	NPHS2	Q9NP85	383 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	LHX9	Q9NQ69	397 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	AGPAT4	Q9NRZ5	378 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	CCM2L	Q9NUG4	571 aa	Predicted RBP	5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	TAAR2	Q9P1P5	351 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	LNPEP	Q9UIQ6	1025 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	DCTN4	Q9UJW0	460 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	ADAM21	Q9UKJ8	722 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260	PLEKHM1	Q9Y4G2	1056 aa		5.9	□□□□□ -1.46
RACGAP1-223	ENST00000551260		A0A096LPE4	126 aa		5.89	□□□□□ -1.47
RACGAP1-223	ENST00000551260		A0A1W2PPZ6	126 aa		5.89	□□□□□ -1.47
RACGAP1-223	ENST00000551260	MASP2	O00187	686 aa		5.89	□□□□□ -1.47
RACGAP1-223	ENST00000551260	TOR1B	O14657	336 aa		5.89	□□□□□ -1.47
RACGAP1-223	ENST00000551260	EIF3D	O15371	548 aa	Known RBP eCLIP	5.89	□□□□□ -1.47
RACGAP1-223	ENST00000551260	TMEM63A	O94886	807 aa		5.89	□□□□□ -1.47
RACGAP1-223	ENST00000551260	TIAF1	O95411	115 aa		5.89	□□□□□ -1.47
RACGAP1-223	ENST00000551260	RECK	O95980	971 aa		5.89	□□□□□ -1.47

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