RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 BIRC2Q13490 618 aa12.54□□□□□ -0.4
LETMD1-222ENST00000550274 DOK6Q6PKX4 331 aa12.54□□□□□ -0.4
LETMD1-222ENST00000550274 RBM43Q6ZSC3 357 aaKnown RBP12.54□□□□□ -0.4
LETMD1-222ENST00000550274 TRIM74Q86UV6 250 aa12.54□□□□□ -0.4
LETMD1-222ENST00000550274 ZNF761Q86XN6 746 aaPredicted RBP12.54□□□□□ -0.4
LETMD1-222ENST00000550274 IL22RA1Q8N6P7 574 aa12.54□□□□□ -0.4
LETMD1-222ENST00000550274 OR4D9Q8NGE8 314 aa12.54□□□□□ -0.4
LETMD1-222ENST00000550274 FNIP1Q8TF40 1166 aa12.54□□□□□ -0.4
LETMD1-222ENST00000550274 MCCC1Q96RQ3 725 aaPredicted RBP12.54□□□□□ -0.4
LETMD1-222ENST00000550274 MGME1Q9BQP7 344 aa12.54□□□□□ -0.4
LETMD1-222ENST00000550274 OCIAD1Q9NX40 245 aa12.54□□□□□ -0.4
LETMD1-222ENST00000550274 CD84Q9UIB8 345 aa12.54□□□□□ -0.4
LETMD1-222ENST00000550274 PHTF1Q9UMS5 762 aa12.54□□□□□ -0.4
LETMD1-222ENST00000550274 TEX15Q9BXT5 2789 aa12.54□□□□□ -0.4
LETMD1-222ENST00000550274 A0A1W2PQ67 120 aa12.53□□□□□ -0.4
LETMD1-222ENST00000550274 LRRC10BA6NIK2 292 aa12.53□□□□□ -0.4
LETMD1-222ENST00000550274 PSMD11O00231 422 aa12.53□□□□□ -0.4
LETMD1-222ENST00000550274 MAFKO60675 156 aa12.53□□□□□ -0.4
LETMD1-222ENST00000550274 PGLSO95336 258 aa12.53□□□□□ -0.4
LETMD1-222ENST00000550274 CYP2A6P11509 494 aaPredicted RBP12.53□□□□□ -0.4
LETMD1-222ENST00000550274 TCF4P15884 667 aa12.53□□□□□ -0.4
LETMD1-222ENST00000550274 CTPS1P17812 591 aa12.53□□□□□ -0.4
LETMD1-222ENST00000550274 AMPD1P23109 780 aa12.53□□□□□ -0.4
LETMD1-222ENST00000550274 IL1R2P27930 398 aa12.53□□□□□ -0.4
LETMD1-222ENST00000550274 TEAD1P28347 426 aa12.53□□□□□ -0.4
LETMD1-222ENST00000550274 HSPA9P38646 679 aaKnown RBP12.53□□□□□ -0.4
LETMD1-222ENST00000550274 POLE2P56282 527 aa12.53□□□□□ -0.4
LETMD1-222ENST00000550274 MYL5Q02045 173 aa12.53□□□□□ -0.4
LETMD1-222ENST00000550274 SRSF1Q07955 248 aaKnown RBP eCLIP12.53□□□□□ -0.4
LETMD1-222ENST00000550274 SQSTM1Q13501 440 aa12.53□□□□□ -0.4
LETMD1-222ENST00000550274 TRA2AQ13595 282 aaKnown RBP eCLIP12.53□□□□□ -0.4
LETMD1-222ENST00000550274 NCAPHQ15003 741 aa12.53□□□□□ -0.4
LETMD1-222ENST00000550274 SMTNL2Q2TAL5 461 aa12.53□□□□□ -0.4
LETMD1-222ENST00000550274 COLEC12Q5KU26 742 aa12.53□□□□□ -0.4
LETMD1-222ENST00000550274 BORAQ6PGQ7 559 aa12.53□□□□□ -0.4
LETMD1-222ENST00000550274 TECPR1Q7Z6L1 1165 aa12.53□□□□□ -0.4
LETMD1-222ENST00000550274 PTRH1Q86Y79 214 aaKnown RBP12.53□□□□□ -0.4
LETMD1-222ENST00000550274 PSTKQ8IV42 348 aaKnown RBP12.53□□□□□ -0.4
LETMD1-222ENST00000550274 LZTR1Q8N653 840 aa12.53□□□□□ -0.4
LETMD1-222ENST00000550274 AGBL5Q8NDL9 886 aa12.53□□□□□ -0.4
LETMD1-222ENST00000550274 ANKRD20A12PQ8NF67 263 aa12.53□□□□□ -0.4
LETMD1-222ENST00000550274 SCRN2Q96FV2 425 aa12.53□□□□□ -0.4
LETMD1-222ENST00000550274 SCARF2Q96GP6 870 aaPredicted RBP12.53□□□□□ -0.4
LETMD1-222ENST00000550274 OR2M4Q96R27 311 aa12.53□□□□□ -0.4
LETMD1-222ENST00000550274 DDA1Q9BW61 102 aa12.53□□□□□ -0.4
LETMD1-222ENST00000550274 CDH19Q9H159 772 aa12.53□□□□□ -0.4
LETMD1-222ENST00000550274 ADNPQ9H2P0 1102 aa12.53□□□□□ -0.4
LETMD1-222ENST00000550274 LMBRD1Q9NUN5 540 aa12.53□□□□□ -0.4
LETMD1-222ENST00000550274 KCTD5Q9NXV2 234 aa12.53□□□□□ -0.4
LETMD1-222ENST00000550274 KCNK4Q9NYG8 393 aa12.53□□□□□ -0.4
LETMD1-222ENST00000550274 TMEM98Q9Y2Y6 226 aa12.53□□□□□ -0.4
LETMD1-222ENST00000550274 PRRC2CQ9Y520 2896 aaKnown RBP12.53□□□□□ -0.4
LETMD1-222ENST00000550274 H3BRJ5 948 aa12.52□□□□□ -0.41
LETMD1-222ENST00000550274 ZW10O43264 779 aa12.52□□□□□ -0.41
LETMD1-222ENST00000550274 RAD1O60671 282 aa12.52□□□□□ -0.41
LETMD1-222ENST00000550274 EML2O95834 649 aa12.52□□□□□ -0.41
LETMD1-222ENST00000550274 PDHA1P08559 390 aa12.52□□□□□ -0.41
LETMD1-222ENST00000550274 CCDC172P0C7W6 258 aa12.52□□□□□ -0.41
LETMD1-222ENST00000550274 ATP1A3P13637 1013 aa12.52□□□□□ -0.41
LETMD1-222ENST00000550274 CSTF2P33240 577 aaKnown RBP eCLIP12.52□□□□□ -0.41
LETMD1-222ENST00000550274 GPR1P46091 355 aa12.52□□□□□ -0.41
LETMD1-222ENST00000550274 ZNF135P52742 658 aaPredicted RBP12.52□□□□□ -0.41
LETMD1-222ENST00000550274 DPTQ07507 201 aa12.52□□□□□ -0.41
LETMD1-222ENST00000550274 KCNAB2Q13303 367 aa12.52□□□□□ -0.41
LETMD1-222ENST00000550274 DPYSL2Q16555 572 aa12.52□□□□□ -0.41
LETMD1-222ENST00000550274 E4F1Q66K89 784 aaPredicted RBP12.52□□□□□ -0.41
LETMD1-222ENST00000550274 ANKS6Q68DC2 871 aa12.52□□□□□ -0.41
LETMD1-222ENST00000550274 PPP1R2P3Q6NXS1 205 aa12.52□□□□□ -0.41
LETMD1-222ENST00000550274 MARK2Q7KZI7 788 aaKnown RBP12.52□□□□□ -0.41
LETMD1-222ENST00000550274 POLNQ7Z5Q5 900 aa12.52□□□□□ -0.41
LETMD1-222ENST00000550274 FAM129CQ86XR2 697 aa12.52□□□□□ -0.41
LETMD1-222ENST00000550274 CACNA2D3Q8IZS8 1091 aa12.52□□□□□ -0.41
LETMD1-222ENST00000550274 BMPERQ8N8U9 685 aa12.52□□□□□ -0.41
LETMD1-222ENST00000550274 ZNF564Q8TBZ8 553 aaPredicted RBP12.52□□□□□ -0.41
LETMD1-222ENST00000550274 SLC37A2Q8TED4 501 aa12.52□□□□□ -0.41
LETMD1-222ENST00000550274 PIH1D2Q8WWB5 315 aa12.52□□□□□ -0.41
LETMD1-222ENST00000550274 SCAMP4Q969E2 229 aa12.52□□□□□ -0.41
LETMD1-222ENST00000550274 AGAP2Q99490 1192 aa12.52□□□□□ -0.41
LETMD1-222ENST00000550274 ABCG8Q9H221 673 aa12.52□□□□□ -0.41
LETMD1-222ENST00000550274 ZWILCHQ9H900 591 aa12.52□□□□□ -0.41
LETMD1-222ENST00000550274 SLC39A1Q9NY26 324 aa12.52□□□□□ -0.41
LETMD1-222ENST00000550274 CNOT8Q9UFF9 292 aaKnown RBP12.52□□□□□ -0.41
LETMD1-222ENST00000550274 PCYT1BQ9Y5K3 369 aaPredicted RBP12.52□□□□□ -0.41
LETMD1-222ENST00000550274 SPTBN1Q01082 2364 aaKnown RBP12.52□□□□□ -0.41
LETMD1-222ENST00000550274 TRBV23OR9-2A0A075B6M9 112 aa12.51□□□□□ -0.41
LETMD1-222ENST00000550274 NBPF19A0A087WUL8 3843 aa12.51□□□□□ -0.41
LETMD1-222ENST00000550274 LRRC53A6NM62 1247 aa12.51□□□□□ -0.41
LETMD1-222ENST00000550274 EFCAB7A8K855 629 aa12.51□□□□□ -0.41
LETMD1-222ENST00000550274 FTLP02792 175 aaPredicted RBP12.51□□□□□ -0.41
LETMD1-222ENST00000550274 CDK11BP21127 795 aaKnown RBP12.51□□□□□ -0.41
LETMD1-222ENST00000550274 MMP13P45452 471 aa12.51□□□□□ -0.41
LETMD1-222ENST00000550274 FASLGP48023 281 aa12.51□□□□□ -0.41
LETMD1-222ENST00000550274 IHHQ14623 411 aa12.51□□□□□ -0.41
LETMD1-222ENST00000550274 SKIDA1Q1XH10 827 aa12.51□□□□□ -0.41
LETMD1-222ENST00000550274 PYCR3Q53H96 274 aa12.51□□□□□ -0.41
LETMD1-222ENST00000550274 ARMC12Q5T9G4 340 aa12.51□□□□□ -0.41
LETMD1-222ENST00000550274 LRRC66Q68CR7 880 aa12.51□□□□□ -0.41
LETMD1-222ENST00000550274 TXNRD3NBQ6F5E7 133 aa12.51□□□□□ -0.41
LETMD1-222ENST00000550274 TMEM71Q6P5X7 295 aa12.51□□□□□ -0.41
LETMD1-222ENST00000550274 TMCO3Q6UWJ1 677 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms