RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 ZNF106Q9H2Y7 1883 aaKnown RBP19.29■□□□□ 0.68
DDX54-207ENST00000550016 GOLGA6L10A0A0M3HER8 536 aa19.29■□□□□ 0.68
DDX54-207ENST00000550016 ERI2A8K979 691 aaKnown RBP19.29■□□□□ 0.68
DDX54-207ENST00000550016 PDE2AO00408 941 aaPredicted RBP19.29■□□□□ 0.68
DDX54-207ENST00000550016 AURKAO14965 403 aa19.29■□□□□ 0.68
DDX54-207ENST00000550016 USP12O75317 370 aa19.29■□□□□ 0.68
DDX54-207ENST00000550016 AP2A1O95782 977 aa19.29■□□□□ 0.68
DDX54-207ENST00000550016 SLC4A1P02730 911 aa19.29■□□□□ 0.68
DDX54-207ENST00000550016 CSF2P04141 144 aa19.29■□□□□ 0.68
DDX54-207ENST00000550016 ZSCAN5DPP0CG00 497 aa19.29■□□□□ 0.68
DDX54-207ENST00000550016 EPHA8P29322 1005 aaPredicted RBP19.29■□□□□ 0.68
DDX54-207ENST00000550016 GPR1P46091 355 aa19.29■□□□□ 0.68
DDX54-207ENST00000550016 HNRNPKP61978 463 aaKnown RBP eCLIP19.29■□□□□ 0.68
DDX54-207ENST00000550016 ETF1P62495 437 aaKnown RBP19.29■□□□□ 0.68
DDX54-207ENST00000550016 BNIP3Q12983 259 aa19.29■□□□□ 0.68
DDX54-207ENST00000550016 ZNF542PQ5EBM4 170 aa19.29■□□□□ 0.68
DDX54-207ENST00000550016 ADAMTSL4Q6UY14 1074 aa19.29■□□□□ 0.68
DDX54-207ENST00000550016 SAP25Q8TEE9 199 aa19.29■□□□□ 0.68
DDX54-207ENST00000550016 WDR92Q96MX6 357 aa19.29■□□□□ 0.68
DDX54-207ENST00000550016 RAB6BQ9NRW1 208 aa19.29■□□□□ 0.68
DDX54-207ENST00000550016 E7EVH7 732 aa19.28■□□□□ 0.68
DDX54-207ENST00000550016 FLRT2O43155 660 aa19.28■□□□□ 0.68
DDX54-207ENST00000550016 SH3BP5O60239 455 aa19.28■□□□□ 0.68
DDX54-207ENST00000550016 MYCLP1P12525 358 aaPredicted RBP19.28■□□□□ 0.68
DDX54-207ENST00000550016 NME1P15531 152 aaKnown RBP19.28■□□□□ 0.68
DDX54-207ENST00000550016 CSRP1P21291 193 aaKnown RBP19.28■□□□□ 0.68
DDX54-207ENST00000550016 KELP23276 732 aa19.28■□□□□ 0.68
DDX54-207ENST00000550016 HMGCLP35914 325 aa19.28■□□□□ 0.68
DDX54-207ENST00000550016 COILP38432 576 aaPredicted RBP19.28■□□□□ 0.68
DDX54-207ENST00000550016 DCDC1P59894 354 aa19.28■□□□□ 0.68
DDX54-207ENST00000550016 SEMA5AQ13591 1074 aa19.28■□□□□ 0.68
DDX54-207ENST00000550016 HS1BP3Q53T59 392 aa19.28■□□□□ 0.68
DDX54-207ENST00000550016 HENMT1Q5T8I9 393 aaKnown RBP19.28■□□□□ 0.68
DDX54-207ENST00000550016 TTC27Q6P3X3 843 aa19.28■□□□□ 0.68
DDX54-207ENST00000550016 ENPP7Q6UWV6 458 aa19.28■□□□□ 0.68
DDX54-207ENST00000550016 GLT6D1Q7Z4J2 308 aa19.28■□□□□ 0.68
DDX54-207ENST00000550016 LINC00523Q86TU6 105 aa19.28■□□□□ 0.68
DDX54-207ENST00000550016 HEATR4Q86WZ0 1026 aa19.28■□□□□ 0.68
DDX54-207ENST00000550016 GATAD2AQ86YP4 633 aa19.28■□□□□ 0.68
DDX54-207ENST00000550016 NAXDQ8IW45 347 aa19.28■□□□□ 0.68
DDX54-207ENST00000550016 SETD7Q8WTS6 366 aaKnown RBP19.28■□□□□ 0.68
DDX54-207ENST00000550016 BTN2A2Q8WVV5 523 aa19.28■□□□□ 0.68
DDX54-207ENST00000550016 LGR4Q9BXB1 951 aa19.28■□□□□ 0.68
DDX54-207ENST00000550016 NFKBIL1Q9UBC1 381 aaPredicted RBP19.28■□□□□ 0.68
DDX54-207ENST00000550016 KLF15Q9UIH9 416 aa19.28■□□□□ 0.68
DDX54-207ENST00000550016 ZFC3H1O60293 1989 aaKnown RBP19.28■□□□□ 0.68
DDX54-207ENST00000550016 DCDC2BA2VCK2 349 aa19.27■□□□□ 0.68
DDX54-207ENST00000550016 H3BM21 787 aa19.27■□□□□ 0.68
DDX54-207ENST00000550016 TNFRSF10CO14798 259 aa19.27■□□□□ 0.68
DDX54-207ENST00000550016 FANCGO15287 622 aa19.27■□□□□ 0.68
DDX54-207ENST00000550016 PHF2O75151 1096 aa19.27■□□□□ 0.68
DDX54-207ENST00000550016 PIAS2O75928 621 aa19.27■□□□□ 0.68
DDX54-207ENST00000550016 SOD1P00441 154 aa19.27■□□□□ 0.68
DDX54-207ENST00000550016 BPIP17213 487 aa19.27■□□□□ 0.68
DDX54-207ENST00000550016 JUNDP17535 347 aa19.27■□□□□ 0.68
DDX54-207ENST00000550016 CASQ1P31415 396 aa19.27■□□□□ 0.68
DDX54-207ENST00000550016 LMAN1P49257 510 aa19.27■□□□□ 0.68
DDX54-207ENST00000550016 CDK3Q00526 305 aa19.27■□□□□ 0.68
DDX54-207ENST00000550016 PPARDQ03181 441 aa19.27■□□□□ 0.68
DDX54-207ENST00000550016 MSLNQ13421 630 aaPredicted RBP19.27■□□□□ 0.68
DDX54-207ENST00000550016 TAF1AQ15573 450 aaPredicted RBP19.27■□□□□ 0.68
DDX54-207ENST00000550016 INAVAQ3KP66 663 aa19.27■□□□□ 0.68
DDX54-207ENST00000550016 CCDC137Q6PK04 289 aaKnown RBP19.27■□□□□ 0.68
DDX54-207ENST00000550016 KANSL1Q7Z3B3 1105 aa19.27■□□□□ 0.68
DDX54-207ENST00000550016 CREG2Q8IUH2 290 aa19.27■□□□□ 0.68
DDX54-207ENST00000550016 GPR26Q8NDV2 337 aa19.27■□□□□ 0.68
DDX54-207ENST00000550016 OR56A4Q8NGH8 313 aa19.27■□□□□ 0.68
DDX54-207ENST00000550016 BRSK1Q8TDC3 778 aa19.27■□□□□ 0.68
DDX54-207ENST00000550016 CAPZA3Q96KX2 299 aa19.27■□□□□ 0.68
DDX54-207ENST00000550016 AGAP2Q99490 1192 aa19.27■□□□□ 0.68
DDX54-207ENST00000550016 SLC13A1Q9BZW2 595 aa19.27■□□□□ 0.68
DDX54-207ENST00000550016 SLC32A1Q9H598 525 aa19.27■□□□□ 0.68
DDX54-207ENST00000550016 IL17CQ9P0M4 197 aa19.27■□□□□ 0.68
DDX54-207ENST00000550016 PLXNB3Q9ULL4 1909 aa19.27■□□□□ 0.67
DDX54-207ENST00000550016 COL5A1P20908 1838 aaPredicted RBP19.26■□□□□ 0.67
DDX54-207ENST00000550016 TMEM202A6NGA9 273 aa19.26■□□□□ 0.67
DDX54-207ENST00000550016 C2orf81A6NN90 581 aa19.26■□□□□ 0.67
DDX54-207ENST00000550016 SDC3O75056 442 aa19.26■□□□□ 0.67
DDX54-207ENST00000550016 SUN1O94901 812 aa19.26■□□□□ 0.67
DDX54-207ENST00000550016 LPOP22079 712 aaPredicted RBP19.26■□□□□ 0.67
DDX54-207ENST00000550016 DGKAP23743 735 aa19.26■□□□□ 0.67
DDX54-207ENST00000550016 GRK6P43250 576 aa19.26■□□□□ 0.67
DDX54-207ENST00000550016 BLKP51451 505 aa19.26■□□□□ 0.67
DDX54-207ENST00000550016 SRP54P61011 504 aaKnown RBP19.26■□□□□ 0.67
DDX54-207ENST00000550016 ALG11Q2TAA5 492 aa19.26■□□□□ 0.67
DDX54-207ENST00000550016 ZDHHC20Q5W0Z9 365 aa19.26■□□□□ 0.67
DDX54-207ENST00000550016 PHACTR4Q8IZ21 702 aa19.26■□□□□ 0.67
DDX54-207ENST00000550016 RHBDD1Q8TEB9 315 aa19.26■□□□□ 0.67
DDX54-207ENST00000550016 TSACCQ96A04 125 aaPredicted RBP19.26■□□□□ 0.67
DDX54-207ENST00000550016 HIC2Q96JB3 615 aa19.26■□□□□ 0.67
DDX54-207ENST00000550016 CAMK1GQ96NX5 476 aa19.26■□□□□ 0.67
DDX54-207ENST00000550016 PLEKHG4BQ96PX9 1271 aa19.26■□□□□ 0.67
DDX54-207ENST00000550016 SPATA16Q9BXB7 569 aa19.26■□□□□ 0.67
DDX54-207ENST00000550016 BPIFA1Q9NP55 256 aa19.26■□□□□ 0.67
DDX54-207ENST00000550016 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.26■□□□□ 0.67
DDX54-207ENST00000550016 RNF14Q9UBS8 474 aa19.26■□□□□ 0.67
DDX54-207ENST00000550016 KLQ9UEF7 1012 aa19.26■□□□□ 0.67
DDX54-207ENST00000550016 PNMA8BQ9ULN7 279 aaPredicted RBP19.26■□□□□ 0.67
DDX54-207ENST00000550016 PKP3Q9Y446 797 aa19.26■□□□□ 0.67
DDX54-207ENST00000550016 GOLGA4Q13439 2230 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms