RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 DHRSXQ8N5I4 330 aa16.26■□□□□ 0.19
CUX1-213ENST00000549414 VPS33AQ96AX1 596 aa16.26■□□□□ 0.19
CUX1-213ENST00000549414 PPM1MQ96MI6 270 aa16.26■□□□□ 0.19
CUX1-213ENST00000549414 RERGLQ9H628 205 aa16.26■□□□□ 0.19
CUX1-213ENST00000549414 KCTD3Q9Y597 815 aa16.26■□□□□ 0.19
CUX1-213ENST00000549414 CPQQ9Y646 472 aa16.26■□□□□ 0.19
CUX1-213ENST00000549414 A0A1B0GVM2 712 aa16.25■□□□□ 0.19
CUX1-213ENST00000549414 CCDC162PA2VCL2 907 aa16.25■□□□□ 0.19
CUX1-213ENST00000549414 TCAF2A6NFQ2 919 aa16.25■□□□□ 0.19
CUX1-213ENST00000549414 SLC38A8A6NNN8 435 aa16.25■□□□□ 0.19
CUX1-213ENST00000549414 SLC25A14O95258 325 aaPredicted RBP16.25■□□□□ 0.19
CUX1-213ENST00000549414 EOMESO95936 686 aa16.25■□□□□ 0.19
CUX1-213ENST00000549414 SYN1P17600 705 aa16.25■□□□□ 0.19
CUX1-213ENST00000549414 MLLT6P55198 1093 aaPredicted RBP16.25■□□□□ 0.19
CUX1-213ENST00000549414 MAD2L1Q13257 205 aaPredicted RBP16.25■□□□□ 0.19
CUX1-213ENST00000549414 PTPRCAPQ14761 206 aa16.25■□□□□ 0.19
CUX1-213ENST00000549414 SWT1Q5T5J6 900 aaKnown RBP16.25■□□□□ 0.19
CUX1-213ENST00000549414 PQLC1Q8N2U9 271 aa16.25■□□□□ 0.19
CUX1-213ENST00000549414 GPR156Q8NFN8 814 aa16.25■□□□□ 0.19
CUX1-213ENST00000549414 OR52B2Q96RD2 323 aa16.25■□□□□ 0.19
CUX1-213ENST00000549414 NMUR1Q9HB89 426 aa16.25■□□□□ 0.19
CUX1-213ENST00000549414 FBXL21Q9UKT6 434 aa16.25■□□□□ 0.19
CUX1-213ENST00000549414 PADI4Q9UM07 663 aa16.25■□□□□ 0.19
CUX1-213ENST00000549414 SLC45A1Q9Y2W3 748 aa16.25■□□□□ 0.19
CUX1-213ENST00000549414 TNRC6CQ9HCJ0 1690 aaKnown RBP16.25■□□□□ 0.19
CUX1-213ENST00000549414 SIX3O95343 332 aaPredicted RBP16.25■□□□□ 0.19
CUX1-213ENST00000549414 RBM20Q5T481 1227 aaKnown RBP16.25■□□□□ 0.19
CUX1-213ENST00000549414 ARMC6Q6NXE6 501 aa16.25■□□□□ 0.19
CUX1-213ENST00000549414 NAPRTQ6XQN6 538 aa16.25■□□□□ 0.19
CUX1-213ENST00000549414 KIAA0408Q6ZU52 694 aa16.25■□□□□ 0.19
CUX1-213ENST00000549414 CCDC149Q6ZUS6 474 aa16.25■□□□□ 0.19
CUX1-213ENST00000549414 LPCAT2Q7L5N7 544 aa16.25■□□□□ 0.19
CUX1-213ENST00000549414 C7orf61Q8IZ16 206 aa16.25■□□□□ 0.19
CUX1-213ENST00000549414 PTCD2Q8WV60 388 aaKnown RBP16.25■□□□□ 0.19
CUX1-213ENST00000549414 DNAJC28Q9NX36 388 aa16.25■□□□□ 0.19
CUX1-213ENST00000549414 CLIC5Q9NZA1 410 aa16.25■□□□□ 0.19
CUX1-213ENST00000549414 TIPRLO75663 272 aa16.25■□□□□ 0.19
CUX1-213ENST00000549414 CATP04040 527 aaKnown RBP16.25■□□□□ 0.19
CUX1-213ENST00000549414 NDST2P52849 883 aa16.25■□□□□ 0.19
CUX1-213ENST00000549414 C14orf80Q86SX3 495 aa16.25■□□□□ 0.19
CUX1-213ENST00000549414 FAM9CQ8IZT9 166 aa16.25■□□□□ 0.19
CUX1-213ENST00000549414 ARFGAP1Q8N6T3 406 aa16.25■□□□□ 0.19
CUX1-213ENST00000549414 SLAIN1Q8ND83 568 aa16.25■□□□□ 0.19
CUX1-213ENST00000549414 STYXQ8WUJ0 223 aa16.25■□□□□ 0.19
CUX1-213ENST00000549414 TWIST2Q8WVJ9 160 aa16.25■□□□□ 0.19
CUX1-213ENST00000549414 KBTBD7Q8WVZ9 684 aa16.25■□□□□ 0.19
CUX1-213ENST00000549414 S100A14Q9HCY8 104 aa16.25■□□□□ 0.19
CUX1-213ENST00000549414 LEF1Q9UJU2 399 aaPredicted RBP16.25■□□□□ 0.19
CUX1-213ENST00000549414 RPL26L1Q9UNX3 145 aaKnown RBP16.25■□□□□ 0.19
CUX1-213ENST00000549414 POLR3HQ9Y535 204 aaPredicted RBP16.25■□□□□ 0.19
CUX1-213ENST00000549414 PRKCHP24723 683 aa16.25■□□□□ 0.19
CUX1-213ENST00000549414 SLC18A2Q05940 514 aa16.25■□□□□ 0.19
CUX1-213ENST00000549414 IL10RBQ08334 325 aa16.25■□□□□ 0.19
CUX1-213ENST00000549414 PAFAH1B3Q15102 231 aaKnown RBP16.25■□□□□ 0.19
CUX1-213ENST00000549414 ZNF513Q8N8E2 541 aaPredicted RBP16.25■□□□□ 0.19
CUX1-213ENST00000549414 MYOCQ99972 504 aa16.25■□□□□ 0.19
CUX1-213ENST00000549414 TRMOQ9BU70 441 aa16.25■□□□□ 0.19
CUX1-213ENST00000549414 DNAJB4Q9UDY4 337 aa16.25■□□□□ 0.19
CUX1-213ENST00000549414 PRPF19Q9UMS4 504 aaKnown RBP16.25■□□□□ 0.19
CUX1-213ENST00000549414 INSIG1O15503 277 aa16.24■□□□□ 0.19
CUX1-213ENST00000549414 RAD23AP54725 363 aa16.24■□□□□ 0.19
CUX1-213ENST00000549414 TRIM32Q13049 653 aa16.24■□□□□ 0.19
CUX1-213ENST00000549414 KIAA0930Q6ICG6 404 aaPredicted RBP16.24■□□□□ 0.19
CUX1-213ENST00000549414 RBFAQ8N0V3 343 aa16.24■□□□□ 0.19
CUX1-213ENST00000549414 PLD6Q8N2A8 252 aaKnown RBP16.24■□□□□ 0.19
CUX1-213ENST00000549414 FUBP3Q96I24 572 aaKnown RBP eCLIP16.24■□□□□ 0.19
CUX1-213ENST00000549414 TXLNGYQ9BZA5 131 aa16.24■□□□□ 0.19
CUX1-213ENST00000549414 TRPC4Q9UBN4 977 aa16.24■□□□□ 0.19
CUX1-213ENST00000549414 H3BMM5 538 aa16.24■□□□□ 0.19
CUX1-213ENST00000549414 CCR10P46092 362 aa16.24■□□□□ 0.19
CUX1-213ENST00000549414 PPP1R15BQ5SWA1 713 aa16.24■□□□□ 0.19
CUX1-213ENST00000549414 CLVS1Q8IUQ0 354 aaPredicted RBP16.24■□□□□ 0.19
CUX1-213ENST00000549414 SNRNP27Q8WVK2 155 aaKnown RBP16.24■□□□□ 0.19
CUX1-213ENST00000549414 TSSK3Q96PN8 268 aa16.24■□□□□ 0.19
CUX1-213ENST00000549414 MAGEH1Q9H213 219 aa16.24■□□□□ 0.19
CUX1-213ENST00000549414 EPB41L4BQ9H329 900 aa16.24■□□□□ 0.19
CUX1-213ENST00000549414 SLC7A8Q9UHI5 535 aa16.24■□□□□ 0.19
CUX1-213ENST00000549414 NENFQ9UMX5 172 aa16.24■□□□□ 0.19
CUX1-213ENST00000549414 TLR6Q9Y2C9 796 aa16.24■□□□□ 0.19
CUX1-213ENST00000549414 PTGESO14684 152 aa16.24■□□□□ 0.19
CUX1-213ENST00000549414 PRAMEF1O95521 474 aa16.24■□□□□ 0.19
CUX1-213ENST00000549414 CYP2A6P11509 494 aaPredicted RBP16.24■□□□□ 0.19
CUX1-213ENST00000549414 COX7A2P14406 83 aa16.24■□□□□ 0.19
CUX1-213ENST00000549414 ETS2P15036 469 aa16.24■□□□□ 0.19
CUX1-213ENST00000549414 LPIN1Q14693 890 aa16.24■□□□□ 0.19
CUX1-213ENST00000549414 MTX3Q5HYI7 312 aa16.24■□□□□ 0.19
CUX1-213ENST00000549414 SUSD6Q92537 303 aa16.24■□□□□ 0.19
CUX1-213ENST00000549414 OSBPL2Q9H1P3 480 aa16.24■□□□□ 0.19
CUX1-213ENST00000549414 NDUFA13Q9P0J0 144 aa16.24■□□□□ 0.19
CUX1-213ENST00000549414 ZNF229Q9UJW7 825 aa16.24■□□□□ 0.19
CUX1-213ENST00000549414 MYRFQ9Y2G1 1151 aa16.24■□□□□ 0.19
CUX1-213ENST00000549414 RFPL1O75677 317 aa16.23■□□□□ 0.19
CUX1-213ENST00000549414 WFS1O76024 890 aa16.23■□□□□ 0.19
CUX1-213ENST00000549414 IL1BP01584 269 aa16.23■□□□□ 0.19
CUX1-213ENST00000549414 HSPA7P48741 367 aa16.23■□□□□ 0.19
CUX1-213ENST00000549414 FOLH1Q04609 750 aa16.23■□□□□ 0.19
CUX1-213ENST00000549414 SPRED3Q2MJR0 410 aa16.23■□□□□ 0.19
CUX1-213ENST00000549414 PAOXQ6QHF9 649 aa16.23■□□□□ 0.19
CUX1-213ENST00000549414 PIM3Q86V86 326 aa16.23■□□□□ 0.19
CUX1-213ENST00000549414 ZC3HC1Q86WB0 502 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms