RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 H3BMM5 538 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 LINC00032P0C843 101 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 SLC2A3P11169 496 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 MTHFD1P11586 935 aaKnown RBP11.09□□□□□ -0.63
LINC00661-204ENST00000549354 MLLT6P55198 1093 aaPredicted RBP11.09□□□□□ -0.63
LINC00661-204ENST00000549354 PFKFB4Q16877 469 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 KCTD11Q693B1 232 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 TAS1R1Q7RTX1 841 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 C14orf80Q86SX3 495 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 TMEM173Q86WV6 379 aaPredicted RBP11.09□□□□□ -0.63
LINC00661-204ENST00000549354 CLVS1Q8IUQ0 354 aaPredicted RBP11.09□□□□□ -0.63
LINC00661-204ENST00000549354 MFSD6LQ8IWD5 586 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 MIER2Q8N344 545 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 ATAD1Q8NBU5 361 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 VPS33AQ96AX1 596 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 TTLL2Q9BWV7 592 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 DRC3Q9H069 523 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 ZBTB26Q9HCK0 441 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 NCKIPSDQ9NZQ3 722 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.09□□□□□ -0.63
LINC00661-204ENST00000549354 USP22Q9UPT9 525 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 J3KR12 359 aa11.08□□□□□ -0.64
LINC00661-204ENST00000549354 DENRO43583 198 aaKnown RBP11.08□□□□□ -0.64
LINC00661-204ENST00000549354 AP2A1O95782 977 aa11.08□□□□□ -0.64
LINC00661-204ENST00000549354 IGLV3-27P01718 113 aa11.08□□□□□ -0.64
LINC00661-204ENST00000549354 CDH2P19022 906 aaPredicted RBP11.08□□□□□ -0.64
LINC00661-204ENST00000549354 EEF1B2P24534 225 aaKnown RBP11.08□□□□□ -0.64
LINC00661-204ENST00000549354 SLC7A2P52569 658 aa11.08□□□□□ -0.64
LINC00661-204ENST00000549354 C1QTNF8P60827 252 aa11.08□□□□□ -0.64
LINC00661-204ENST00000549354 CDK18Q07002 472 aa11.08□□□□□ -0.64
LINC00661-204ENST00000549354 EFEMP1Q12805 493 aa11.08□□□□□ -0.64
LINC00661-204ENST00000549354 PRKAA1Q13131 559 aa11.08□□□□□ -0.64
LINC00661-204ENST00000549354 TRIM60Q495X7 471 aa11.08□□□□□ -0.64
LINC00661-204ENST00000549354 SGO1Q5FBB7 561 aa11.08□□□□□ -0.64
LINC00661-204ENST00000549354 ACBD5Q5T8D3 534 aaPredicted RBP11.08□□□□□ -0.64
LINC00661-204ENST00000549354 RNF19BQ6ZMZ0 732 aa11.08□□□□□ -0.64
LINC00661-204ENST00000549354 MILR1Q7Z6M3 343 aa11.08□□□□□ -0.64
LINC00661-204ENST00000549354 ZC3HC1Q86WB0 502 aaKnown RBP11.08□□□□□ -0.64
LINC00661-204ENST00000549354 ARHGAP12Q8IWW6 846 aa11.08□□□□□ -0.64
LINC00661-204ENST00000549354 PGAM4Q8N0Y7 254 aa11.08□□□□□ -0.64
LINC00661-204ENST00000549354 TTC9BQ8N6N2 239 aa11.08□□□□□ -0.64
LINC00661-204ENST00000549354 EFHBQ8N7U6 833 aa11.08□□□□□ -0.64
LINC00661-204ENST00000549354 FATE1Q969F0 183 aa11.08□□□□□ -0.64
LINC00661-204ENST00000549354 NAT9Q9BTE0 207 aa11.08□□□□□ -0.64
LINC00661-204ENST00000549354 CRISPLD1Q9H336 500 aa11.08□□□□□ -0.64
LINC00661-204ENST00000549354 OLA1Q9NTK5 396 aaKnown RBP11.08□□□□□ -0.64
LINC00661-204ENST00000549354 MTRRQ9UBK8 725 aa11.08□□□□□ -0.64
LINC00661-204ENST00000549354 SH3BGRLO75368 114 aa11.08□□□□□ -0.64
LINC00661-204ENST00000549354 GFAPP14136 432 aa11.08□□□□□ -0.64
LINC00661-204ENST00000549354 ALOX15P16050 662 aaPredicted RBP11.08□□□□□ -0.64
LINC00661-204ENST00000549354 CCNCP24863 283 aa11.08□□□□□ -0.64
LINC00661-204ENST00000549354 CCL23P55773 120 aa11.08□□□□□ -0.64
LINC00661-204ENST00000549354 DSC2Q02487 901 aa11.08□□□□□ -0.64
LINC00661-204ENST00000549354 FASTKQ14296 549 aaKnown RBP11.08□□□□□ -0.64
LINC00661-204ENST00000549354 ANKDD1AQ495B1 522 aa11.08□□□□□ -0.64
LINC00661-204ENST00000549354 TMEM135Q86UB9 458 aa11.08□□□□□ -0.64
LINC00661-204ENST00000549354 SPPL2CQ8IUH8 684 aa11.08□□□□□ -0.64
LINC00661-204ENST00000549354 ANKRD49Q8WVL7 239 aa11.08□□□□□ -0.64
LINC00661-204ENST00000549354 CANT1Q8WVQ1 401 aa11.08□□□□□ -0.64
LINC00661-204ENST00000549354 HDAC10Q969S8 669 aa11.08□□□□□ -0.64
LINC00661-204ENST00000549354 ZNF689Q96CS4 500 aaPredicted RBP11.08□□□□□ -0.64
LINC00661-204ENST00000549354 MRPS26Q9BYN8 205 aaKnown RBP11.08□□□□□ -0.64
LINC00661-204ENST00000549354 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.08□□□□□ -0.64
LINC00661-204ENST00000549354 GMIPQ9P107 970 aa11.08□□□□□ -0.64
LINC00661-204ENST00000549354 EBF1Q9UH73 591 aa11.08□□□□□ -0.64
LINC00661-204ENST00000549354 CEP290O15078 2479 aa11.08□□□□□ -0.64
LINC00661-204ENST00000549354 A0A1W2PQ67 120 aa11.07□□□□□ -0.64
LINC00661-204ENST00000549354 AXIN1O15169 862 aa11.07□□□□□ -0.64
LINC00661-204ENST00000549354 TIMM44O43615 452 aa11.07□□□□□ -0.64
LINC00661-204ENST00000549354 ATP5BP06576 529 aaKnown RBP11.07□□□□□ -0.64
LINC00661-204ENST00000549354 KCNC1P48547 511 aa11.07□□□□□ -0.64
LINC00661-204ENST00000549354 ENTPD1P49961 510 aa11.07□□□□□ -0.64
LINC00661-204ENST00000549354 FRG1Q14331 258 aaKnown RBP11.07□□□□□ -0.64
LINC00661-204ENST00000549354 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.07□□□□□ -0.64
LINC00661-204ENST00000549354 LRRC49Q8IUZ0 686 aa11.07□□□□□ -0.64
LINC00661-204ENST00000549354 CDK15Q96Q40 435 aa11.07□□□□□ -0.64
LINC00661-204ENST00000549354 VN1R3Q9BXE9 311 aa11.07□□□□□ -0.64
LINC00661-204ENST00000549354 CATSPERBQ9H7T0 1116 aa11.07□□□□□ -0.64
LINC00661-204ENST00000549354 RC3H2Q9HBD1 1191 aaKnown RBP11.07□□□□□ -0.64
LINC00661-204ENST00000549354 WBP1LQ9NX94 342 aa11.07□□□□□ -0.64
LINC00661-204ENST00000549354 RAB26Q9ULW5 256 aa11.07□□□□□ -0.64
LINC00661-204ENST00000549354 CDC14AQ9UNH5 594 aa11.07□□□□□ -0.64
LINC00661-204ENST00000549354 HS3ST4Q9Y661 456 aa11.07□□□□□ -0.64
LINC00661-204ENST00000549354 NUMA1Q14980 2115 aa11.07□□□□□ -0.64
LINC00661-204ENST00000549354 IGLV3-10A0A075B6K4 115 aa11.07□□□□□ -0.64
LINC00661-204ENST00000549354 ARHGAP10A1A4S6 786 aa11.07□□□□□ -0.64
LINC00661-204ENST00000549354 XIAPP98170 497 aa11.07□□□□□ -0.64
LINC00661-204ENST00000549354 IKBKEQ14164 716 aa11.07□□□□□ -0.64
LINC00661-204ENST00000549354 TRIP4Q15650 581 aaPredicted RBP11.07□□□□□ -0.64
LINC00661-204ENST00000549354 STXBP5Q5T5C0 1151 aa11.07□□□□□ -0.64
LINC00661-204ENST00000549354 DUS1LQ6P1R4 473 aaKnown RBP11.07□□□□□ -0.64
LINC00661-204ENST00000549354 ZYG11AQ6WRX3 759 aa11.07□□□□□ -0.64
LINC00661-204ENST00000549354 TRIM74Q86UV6 250 aa11.07□□□□□ -0.64
LINC00661-204ENST00000549354 TRIM73Q86UV7 250 aa11.07□□□□□ -0.64
LINC00661-204ENST00000549354 TMEM102Q8N9M5 508 aaPredicted RBP11.07□□□□□ -0.64
LINC00661-204ENST00000549354 DTNBP1Q96EV8 351 aa11.07□□□□□ -0.64
LINC00661-204ENST00000549354 TEKT5Q96M29 485 aa11.07□□□□□ -0.64
LINC00661-204ENST00000549354 SLC39A8Q9C0K1 460 aa11.07□□□□□ -0.64
LINC00661-204ENST00000549354 GBA3Q9H227 469 aa11.07□□□□□ -0.64
LINC00661-204ENST00000549354 PRPF19Q9UMS4 504 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms