RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 SV2CQ496J9 727 aa23.09■■□□□ 1.29
NPAS3-206ENST00000548645 TWIST2Q8WVJ9 160 aa23.09■■□□□ 1.29
NPAS3-206ENST00000548645 GPRC5DQ9NZD1 345 aa23.09■■□□□ 1.29
NPAS3-206ENST00000548645 PIP5K1BO14986 540 aa23.09■■□□□ 1.29
NPAS3-206ENST00000548645 LBPP18428 481 aa23.09■■□□□ 1.29
NPAS3-206ENST00000548645 WARSP23381 471 aaKnown RBP23.09■■□□□ 1.29
NPAS3-206ENST00000548645 GMPSP49915 693 aaPredicted RBP23.09■■□□□ 1.29
NPAS3-206ENST00000548645 CDH13P55290 713 aa23.09■■□□□ 1.29
NPAS3-206ENST00000548645 SH3BP2P78314 561 aa23.09■■□□□ 1.29
NPAS3-206ENST00000548645 LIPEQ05469 1076 aa23.09■■□□□ 1.29
NPAS3-206ENST00000548645 NFYCQ13952 458 aa23.09■■□□□ 1.29
NPAS3-206ENST00000548645 GRB7Q14451 532 aa23.09■■□□□ 1.29
NPAS3-206ENST00000548645 TMEM53Q6P2H8 277 aa23.09■■□□□ 1.29
NPAS3-206ENST00000548645 BLOC1S3Q6QNY0 202 aa23.09■■□□□ 1.29
NPAS3-206ENST00000548645 ATPAF2Q8N5M1 289 aa23.09■■□□□ 1.29
NPAS3-206ENST00000548645 TMCO5AQ8N6Q1 288 aa23.09■■□□□ 1.29
NPAS3-206ENST00000548645 CYP2S1Q96SQ9 504 aa23.09■■□□□ 1.29
NPAS3-206ENST00000548645 LHPPQ9H008 270 aa23.09■■□□□ 1.29
NPAS3-206ENST00000548645 GIMAP2Q9UG22 337 aa23.09■■□□□ 1.29
NPAS3-206ENST00000548645 FAM32AQ9Y421 112 aaKnown RBP23.09■■□□□ 1.29
NPAS3-206ENST00000548645 PMPCBO75439 489 aa23.08■■□□□ 1.29
NPAS3-206ENST00000548645 NFKB2Q00653 900 aa23.08■■□□□ 1.29
NPAS3-206ENST00000548645 CBX2Q14781 532 aaPredicted RBP23.08■■□□□ 1.29
NPAS3-206ENST00000548645 XAF1Q6GPH4 301 aa23.08■■□□□ 1.29
NPAS3-206ENST00000548645 DNAJB14Q8TBM8 379 aa23.08■■□□□ 1.29
NPAS3-206ENST00000548645 SLC30A3Q99726 388 aa23.08■■□□□ 1.29
NPAS3-206ENST00000548645 CORO1BQ9BR76 489 aa23.08■■□□□ 1.29
NPAS3-206ENST00000548645 DAPK2Q9UIK4 370 aa23.08■■□□□ 1.29
NPAS3-206ENST00000548645 DSEQ9UL01 958 aa23.08■■□□□ 1.29
NPAS3-206ENST00000548645 AZIN1O14977 448 aa23.08■■□□□ 1.28
NPAS3-206ENST00000548645 B4GAT1O43505 415 aa23.08■■□□□ 1.28
NPAS3-206ENST00000548645 SYNCRIPO60506 623 aaKnown RBP23.08■■□□□ 1.28
NPAS3-206ENST00000548645 CNOT3O75175 753 aaKnown RBP23.08■■□□□ 1.28
NPAS3-206ENST00000548645 NCK1P16333 377 aa23.08■■□□□ 1.28
NPAS3-206ENST00000548645 SLC26A3P40879 764 aa23.08■■□□□ 1.28
NPAS3-206ENST00000548645 ZNF846Q147U1 533 aa23.08■■□□□ 1.28
NPAS3-206ENST00000548645 ARHGAP36Q6ZRI8 547 aa23.08■■□□□ 1.28
NPAS3-206ENST00000548645 CATSPER4Q7RTX7 472 aa23.08■■□□□ 1.28
NPAS3-206ENST00000548645 ISCA2Q86U28 154 aa23.08■■□□□ 1.28
NPAS3-206ENST00000548645 PHYKPLQ8IUZ5 450 aa23.08■■□□□ 1.28
NPAS3-206ENST00000548645 TSPEARQ8WU66 669 aa23.08■■□□□ 1.28
NPAS3-206ENST00000548645 CCDC138Q96M89 665 aa23.08■■□□□ 1.28
NPAS3-206ENST00000548645 IL12RB2Q99665 862 aa23.08■■□□□ 1.28
NPAS3-206ENST00000548645 NRCAMQ92823 1304 aa23.07■■□□□ 1.28
NPAS3-206ENST00000548645 KRBA1A5PL33 1030 aa23.07■■□□□ 1.28
NPAS3-206ENST00000548645 UNCXA6NJT0 531 aa23.07■■□□□ 1.28
NPAS3-206ENST00000548645 KCNH1O95259 989 aa23.07■■□□□ 1.28
NPAS3-206ENST00000548645 EEF1DP29692 281 aaKnown RBP23.07■■□□□ 1.28
NPAS3-206ENST00000548645 CHRNA4P43681 627 aa23.07■■□□□ 1.28
NPAS3-206ENST00000548645 KCNC1P48547 511 aa23.07■■□□□ 1.28
NPAS3-206ENST00000548645 OXA1LQ15070 435 aa23.07■■□□□ 1.28
NPAS3-206ENST00000548645 GTF2IRD2BQ6EKJ0 949 aa23.07■■□□□ 1.28
NPAS3-206ENST00000548645 GTF2IRD2Q86UP8 949 aa23.07■■□□□ 1.28
NPAS3-206ENST00000548645 TUBGCP3Q96CW5 907 aa23.07■■□□□ 1.28
NPAS3-206ENST00000548645 TRIM8Q9BZR9 551 aa23.07■■□□□ 1.28
NPAS3-206ENST00000548645 MID1IP1Q9NPA3 183 aa23.07■■□□□ 1.28
NPAS3-206ENST00000548645 PTGDR2Q9Y5Y4 395 aa23.07■■□□□ 1.28
NPAS3-206ENST00000548645 CDK14O94921 469 aa23.07■■□□□ 1.28
NPAS3-206ENST00000548645 CXCR3P49682 368 aa23.07■■□□□ 1.28
NPAS3-206ENST00000548645 MLLT10P55197 1068 aa23.07■■□□□ 1.28
NPAS3-206ENST00000548645 OCA2Q04671 838 aa23.07■■□□□ 1.28
NPAS3-206ENST00000548645 FSCN1Q16658 493 aaKnown RBP23.07■■□□□ 1.28
NPAS3-206ENST00000548645 RABL3Q5HYI8 236 aa23.07■■□□□ 1.28
NPAS3-206ENST00000548645 GPR158Q5T848 1215 aa23.07■■□□□ 1.28
NPAS3-206ENST00000548645 PM20D1Q6GTS8 502 aa23.07■■□□□ 1.28
NPAS3-206ENST00000548645 TBPL2Q6SJ96 375 aa23.07■■□□□ 1.28
NPAS3-206ENST00000548645 ABHD11Q8NFV4 315 aa23.07■■□□□ 1.28
NPAS3-206ENST00000548645 MROQ9BYG7 248 aa23.07■■□□□ 1.28
NPAS3-206ENST00000548645 NXF3Q9H4D5 531 aaKnown RBP23.07■■□□□ 1.28
NPAS3-206ENST00000548645 CNGB3Q9NQW8 809 aa23.07■■□□□ 1.28
NPAS3-206ENST00000548645 GINS2Q9Y248 185 aa23.07■■□□□ 1.28
NPAS3-206ENST00000548645 CPQQ9Y646 472 aa23.07■■□□□ 1.28
NPAS3-206ENST00000548645 ZFC3H1O60293 1989 aaKnown RBP23.06■■□□□ 1.28
NPAS3-206ENST00000548645 A0A1W2PP18 115 aa23.06■■□□□ 1.28
NPAS3-206ENST00000548645 CLDN25C9JDP6 229 aa23.06■■□□□ 1.28
NPAS3-206ENST00000548645 SLC25A27O95847 323 aa23.06■■□□□ 1.28
NPAS3-206ENST00000548645 HGFP14210 728 aa23.06■■□□□ 1.28
NPAS3-206ENST00000548645 AKAP5P24588 427 aa23.06■■□□□ 1.28
NPAS3-206ENST00000548645 GSTM2P28161 218 aa23.06■■□□□ 1.28
NPAS3-206ENST00000548645 ARHGAP1Q07960 439 aa23.06■■□□□ 1.28
NPAS3-206ENST00000548645 RBM48Q5RL73 367 aaKnown RBP23.06■■□□□ 1.28
NPAS3-206ENST00000548645 OTUD3Q5T2D3 398 aaPredicted RBP23.06■■□□□ 1.28
NPAS3-206ENST00000548645 APOBEC3FQ8IUX4 373 aaKnown RBP23.06■■□□□ 1.28
NPAS3-206ENST00000548645 CSF3RQ99062 836 aa23.06■■□□□ 1.28
NPAS3-206ENST00000548645 SEPHS2Q99611 448 aa23.06■■□□□ 1.28
NPAS3-206ENST00000548645 HEPHQ9BQS7 1158 aa23.06■■□□□ 1.28
NPAS3-206ENST00000548645 CHID1Q9BWS9 393 aa23.06■■□□□ 1.28
NPAS3-206ENST00000548645 ATXN3LQ9H3M9 355 aa23.06■■□□□ 1.28
NPAS3-206ENST00000548645 MAGEE1Q9HCI5 957 aa23.06■■□□□ 1.28
NPAS3-206ENST00000548645 GPC6Q9Y625 555 aaPredicted RBP23.06■■□□□ 1.28
NPAS3-206ENST00000548645 OAS3Q9Y6K5 1087 aaKnown RBP23.06■■□□□ 1.28
NPAS3-206ENST00000548645 SMIM28A0A1B0GU29 152 aa23.06■■□□□ 1.28
NPAS3-206ENST00000548645 TYW5A2RUC4 315 aaKnown RBP23.06■■□□□ 1.28
NPAS3-206ENST00000548645 IREB2P48200 963 aaKnown RBP23.06■■□□□ 1.28
NPAS3-206ENST00000548645 EEFSECP57772 596 aaKnown RBP23.06■■□□□ 1.28
NPAS3-206ENST00000548645 KCTD2Q14681 263 aa23.06■■□□□ 1.28
NPAS3-206ENST00000548645 RANBP10Q6VN20 620 aa23.06■■□□□ 1.28
NPAS3-206ENST00000548645 KDELC2Q7Z4H8 507 aa23.06■■□□□ 1.28
NPAS3-206ENST00000548645 RPL10LQ96L21 214 aaKnown RBP23.06■■□□□ 1.28
NPAS3-206ENST00000548645 SLC52A3Q9NQ40 469 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms