RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 CDH6P55285 790 aa20.3■□□□□ 0.84
SSH1-207ENST00000547862 CYP4F2P78329 520 aa20.3■□□□□ 0.84
SSH1-207ENST00000547862 BOLA3Q53S33 107 aa20.3■□□□□ 0.84
SSH1-207ENST00000547862 LRRC66Q68CR7 880 aa20.3■□□□□ 0.84
SSH1-207ENST00000547862 ZNF761Q86XN6 746 aaPredicted RBP20.3■□□□□ 0.84
SSH1-207ENST00000547862 NAGSQ8N159 534 aa20.3■□□□□ 0.84
SSH1-207ENST00000547862 PMEPA1Q969W9 287 aa20.3■□□□□ 0.84
SSH1-207ENST00000547862 OR2M4Q96R27 311 aa20.3■□□□□ 0.84
SSH1-207ENST00000547862 SEMA3CQ99985 751 aa20.3■□□□□ 0.84
SSH1-207ENST00000547862 FAM117AQ9C073 453 aa20.3■□□□□ 0.84
SSH1-207ENST00000547862 THAP2Q9H0W7 228 aa20.3■□□□□ 0.84
SSH1-207ENST00000547862 TRNAU1APQ9NX07 287 aaKnown RBP20.3■□□□□ 0.84
SSH1-207ENST00000547862 KCTD5Q9NXV2 234 aa20.3■□□□□ 0.84
SSH1-207ENST00000547862 FLNBO75369 2602 aaKnown RBP20.29■□□□□ 0.84
SSH1-207ENST00000547862 IGHV5-10-1A0A0J9YXX1 117 aa20.29■□□□□ 0.84
SSH1-207ENST00000547862 A0A1B0GTH6 734 aa20.29■□□□□ 0.84
SSH1-207ENST00000547862 A0A1W2PQC6 194 aa20.29■□□□□ 0.84
SSH1-207ENST00000547862 PSMD11O00231 422 aa20.29■□□□□ 0.84
SSH1-207ENST00000547862 INPP4BO15327 924 aa20.29■□□□□ 0.84
SSH1-207ENST00000547862 PDHA1P08559 390 aa20.29■□□□□ 0.84
SSH1-207ENST00000547862 FAM87AP0C7U9 286 aa20.29■□□□□ 0.84
SSH1-207ENST00000547862 WT1P19544 449 aaPredicted RBP20.29■□□□□ 0.84
SSH1-207ENST00000547862 SLC25A11Q02978 314 aaKnown RBP20.29■□□□□ 0.84
SSH1-207ENST00000547862 PIGHQ14442 188 aaPredicted RBP20.29■□□□□ 0.84
SSH1-207ENST00000547862 LINC00303Q3SY05 128 aa20.29■□□□□ 0.84
SSH1-207ENST00000547862 ZNF438Q7Z4V0 828 aa20.29■□□□□ 0.84
SSH1-207ENST00000547862 ZSCAN1Q8NBB4 408 aa20.29■□□□□ 0.84
SSH1-207ENST00000547862 AP2M1Q96CW1 435 aa20.29■□□□□ 0.84
SSH1-207ENST00000547862 BPIFA3Q9BQP9 254 aa20.29■□□□□ 0.84
SSH1-207ENST00000547862 NUP85Q9BW27 656 aa20.29■□□□□ 0.84
SSH1-207ENST00000547862 ISCUQ9H1K1 167 aa20.29■□□□□ 0.84
SSH1-207ENST00000547862 SLC17A4Q9Y2C5 497 aa20.29■□□□□ 0.84
SSH1-207ENST00000547862 TRBV23OR9-2A0A075B6M9 112 aa20.28■□□□□ 0.84
SSH1-207ENST00000547862 ASMTLO95671 621 aa20.28■□□□□ 0.84
SSH1-207ENST00000547862 IVLP07476 585 aa20.28■□□□□ 0.84
SSH1-207ENST00000547862 CD48P09326 243 aa20.28■□□□□ 0.84
SSH1-207ENST00000547862 CSF2RBP32927 897 aa20.28■□□□□ 0.84
SSH1-207ENST00000547862 ZNF165P49910 485 aa20.28■□□□□ 0.84
SSH1-207ENST00000547862 DSC2Q02487 901 aa20.28■□□□□ 0.84
SSH1-207ENST00000547862 TMEM164Q5U3C3 297 aa20.28■□□□□ 0.84
SSH1-207ENST00000547862 CAVIN1Q6NZI2 390 aaKnown RBP20.28■□□□□ 0.84
SSH1-207ENST00000547862 ZNF574Q6ZN55 896 aaPredicted RBP20.28■□□□□ 0.84
SSH1-207ENST00000547862 LRRN4Q8WUT4 740 aa20.28■□□□□ 0.84
SSH1-207ENST00000547862 SPOCK2Q92563 424 aa20.28■□□□□ 0.84
SSH1-207ENST00000547862 SCAMP4Q969E2 229 aa20.28■□□□□ 0.84
SSH1-207ENST00000547862 SCRN2Q96FV2 425 aa20.28■□□□□ 0.84
SSH1-207ENST00000547862 MCCC1Q96RQ3 725 aaPredicted RBP20.28■□□□□ 0.84
SSH1-207ENST00000547862 ABCG8Q9H221 673 aa20.28■□□□□ 0.84
SSH1-207ENST00000547862 KCNK4Q9NYG8 393 aa20.28■□□□□ 0.84
SSH1-207ENST00000547862 TMEM9Q9P0T7 183 aa20.28■□□□□ 0.84
SSH1-207ENST00000547862 PPM1DO15297 605 aa20.27■□□□□ 0.84
SSH1-207ENST00000547862 ZW10O43264 779 aa20.27■□□□□ 0.84
SSH1-207ENST00000547862 SOD1P00441 154 aa20.27■□□□□ 0.84
SSH1-207ENST00000547862 CD1CP29017 333 aa20.27■□□□□ 0.84
SSH1-207ENST00000547862 NFKBIBQ15653 356 aa20.27■□□□□ 0.84
SSH1-207ENST00000547862 RALGPS1Q5JS13 557 aa20.27■□□□□ 0.84
SSH1-207ENST00000547862 TECPR1Q7Z6L1 1165 aa20.27■□□□□ 0.84
SSH1-207ENST00000547862 C17orf82Q86X59 251 aaPredicted RBP20.27■□□□□ 0.84
SSH1-207ENST00000547862 FAM129CQ86XR2 697 aa20.27■□□□□ 0.84
SSH1-207ENST00000547862 CPNE8Q86YQ8 564 aa20.27■□□□□ 0.84
SSH1-207ENST00000547862 NDUFAF2Q8N183 169 aa20.27■□□□□ 0.84
SSH1-207ENST00000547862 TEKT4Q8WW24 435 aa20.27■□□□□ 0.84
SSH1-207ENST00000547862 PIH1D2Q8WWB5 315 aa20.27■□□□□ 0.84
SSH1-207ENST00000547862 AGAP2Q99490 1192 aa20.27■□□□□ 0.84
SSH1-207ENST00000547862 POLR1EQ9GZS1 481 aaKnown RBP20.27■□□□□ 0.84
SSH1-207ENST00000547862 IP6K2Q9UHH9 426 aa20.27■□□□□ 0.84
SSH1-207ENST00000547862 CHKBQ9Y259 395 aa20.27■□□□□ 0.84
SSH1-207ENST00000547862 BOD1L1Q8NFC6 3051 aa20.27■□□□□ 0.84
SSH1-207ENST00000547862 MYO18BQ8IUG5 2567 aa20.26■□□□□ 0.83
SSH1-207ENST00000547862 NR1D2Q14995 579 aa20.26■□□□□ 0.83
SSH1-207ENST00000547862 SNAP47Q5SQN1 464 aa20.26■□□□□ 0.83
SSH1-207ENST00000547862 GALNT13Q8IUC8 556 aa20.26■□□□□ 0.83
SSH1-207ENST00000547862 LPCAT1Q8NF37 534 aa20.26■□□□□ 0.83
SSH1-207ENST00000547862 HTR3CQ8WXA8 447 aa20.26■□□□□ 0.83
SSH1-207ENST00000547862 ART4Q93070 314 aa20.26■□□□□ 0.83
SSH1-207ENST00000547862 PRKAB1Q9Y478 270 aa20.26■□□□□ 0.83
SSH1-207ENST00000547862 IGHV1OR21-1A0A087WYE8 117 aa20.25■□□□□ 0.83
SSH1-207ENST00000547862 STMND1H3BQB6 276 aa20.25■□□□□ 0.83
SSH1-207ENST00000547862 HGSO14964 777 aaPredicted RBP20.25■□□□□ 0.83
SSH1-207ENST00000547862 FGF3P11487 239 aaPredicted RBP20.25■□□□□ 0.83
SSH1-207ENST00000547862 CD82P27701 267 aa20.25■□□□□ 0.83
SSH1-207ENST00000547862 TEAD1P28347 426 aa20.25■□□□□ 0.83
SSH1-207ENST00000547862 CSTF2P33240 577 aaKnown RBP eCLIP20.25■□□□□ 0.83
SSH1-207ENST00000547862 GARSP41250 739 aaKnown RBP20.25■□□□□ 0.83
SSH1-207ENST00000547862 ATP1A2P50993 1020 aa20.25■□□□□ 0.83
SSH1-207ENST00000547862 DPTQ07507 201 aa20.25■□□□□ 0.83
SSH1-207ENST00000547862 CCDC122Q5T0U0 273 aa20.25■□□□□ 0.83
SSH1-207ENST00000547862 HGSNATQ68CP4 663 aa20.25■□□□□ 0.83
SSH1-207ENST00000547862 NCBP2-AS2Q69YL0 99 aa20.25■□□□□ 0.83
SSH1-207ENST00000547862 ADAMTSL4Q6UY14 1074 aa20.25■□□□□ 0.83
SSH1-207ENST00000547862 CBARPQ8N350 705 aaPredicted RBP20.25■□□□□ 0.83
SSH1-207ENST00000547862 NIPA2Q8N8Q9 360 aa20.25■□□□□ 0.83
SSH1-207ENST00000547862 SLC37A2Q8TED4 501 aa20.25■□□□□ 0.83
SSH1-207ENST00000547862 CPLX3Q8WVH0 158 aa20.25■□□□□ 0.83
SSH1-207ENST00000547862 AHCYL2Q96HN2 611 aaKnown RBP20.25■□□□□ 0.83
SSH1-207ENST00000547862 RIOK2Q9BVS4 552 aaKnown RBP20.25■□□□□ 0.83
SSH1-207ENST00000547862 CLMPQ9H6B4 373 aa20.25■□□□□ 0.83
SSH1-207ENST00000547862 A0A0J9YYE9 177 aa20.24■□□□□ 0.83
SSH1-207ENST00000547862 TRBC1P01850 177 aa20.24■□□□□ 0.83
SSH1-207ENST00000547862 ATP1A1P05023 1023 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms