RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 WASHC2DQ5SRD0 308 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 ISCA2Q86U28 154 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 SPATA24Q86W54 205 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 RAB3IL1Q8TBN0 382 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 PSKH2Q96QS6 385 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 FEM1AQ9BSK4 669 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 CCL26Q9Y258 94 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 V9GYQ6 96 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 THSD7BQ9C0I4 1608 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 LEPRP48357 1165 aaKnown RBP12.69□□□□□ -0.38
SCAF11-209ENST00000547018 BTKQ06187 659 aa12.69□□□□□ -0.38
SCAF11-209ENST00000547018 SULT2A1Q06520 285 aa12.69□□□□□ -0.38
SCAF11-209ENST00000547018 RING1Q06587 406 aa12.69□□□□□ -0.38
SCAF11-209ENST00000547018 LRRC74BQ6ZQY2 392 aa12.69□□□□□ -0.38
SCAF11-209ENST00000547018 GAREM2Q75VX8 874 aa12.69□□□□□ -0.38
SCAF11-209ENST00000547018 KDM1BQ8NB78 822 aa12.69□□□□□ -0.38
SCAF11-209ENST00000547018 NUDT8Q8WV74 236 aa12.69□□□□□ -0.38
SCAF11-209ENST00000547018 ASIC4Q96FT7 647 aa12.69□□□□□ -0.38
SCAF11-209ENST00000547018 C1orf50Q9BV19 199 aa12.69□□□□□ -0.38
SCAF11-209ENST00000547018 BOCQ9BWV1 1114 aa12.69□□□□□ -0.38
SCAF11-209ENST00000547018 CDH22Q9UJ99 828 aa12.69□□□□□ -0.38
SCAF11-209ENST00000547018 TRAF6Q9Y4K3 522 aa12.69□□□□□ -0.38
SCAF11-209ENST00000547018 COPG1Q9Y678 874 aaKnown RBP12.69□□□□□ -0.38
SCAF11-209ENST00000547018 LOC285095A0A1B0GVY8 99 aa12.69□□□□□ -0.38
SCAF11-209ENST00000547018 MTX2O75431 263 aa12.69□□□□□ -0.38
SCAF11-209ENST00000547018 ZCCHC18P0CG32 403 aa12.69□□□□□ -0.38
SCAF11-209ENST00000547018 PAX3P23760 479 aa12.69□□□□□ -0.38
SCAF11-209ENST00000547018 EEF1DP29692 281 aaKnown RBP12.69□□□□□ -0.38
SCAF11-209ENST00000547018 HTR7P34969 479 aa12.69□□□□□ -0.38
SCAF11-209ENST00000547018 TRIP10Q15642 601 aa12.69□□□□□ -0.38
SCAF11-209ENST00000547018 LRRC26Q2I0M4 334 aa12.69□□□□□ -0.38
SCAF11-209ENST00000547018 PAOXQ6QHF9 649 aa12.69□□□□□ -0.38
SCAF11-209ENST00000547018 RFLNAQ6ZTI6 216 aa12.69□□□□□ -0.38
SCAF11-209ENST00000547018 ZNF784Q8NCA9 323 aaPredicted RBP12.69□□□□□ -0.38
SCAF11-209ENST00000547018 EEF1AKMT1Q8WVE0 214 aa12.69□□□□□ -0.38
SCAF11-209ENST00000547018 MFSD1Q9H3U5 465 aa12.69□□□□□ -0.38
SCAF11-209ENST00000547018 DNAJC28Q9NX36 388 aa12.69□□□□□ -0.38
SCAF11-209ENST00000547018 NDE1Q9NXR1 346 aa12.69□□□□□ -0.38
SCAF11-209ENST00000547018 ZMYM5Q9UJ78 669 aa12.69□□□□□ -0.38
SCAF11-209ENST00000547018 IKZF3Q9UKT9 509 aa12.69□□□□□ -0.38
SCAF11-209ENST00000547018 SLC4A7Q9Y6M7 1214 aa12.69□□□□□ -0.38
SCAF11-209ENST00000547018 A0A087X1B8 175 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 FAM92AA1XBS5 289 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 WASH4PA8MWX3 477 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 TRAFD1O14545 582 aaPredicted RBP12.68□□□□□ -0.38
SCAF11-209ENST00000547018 UBFD1O14562 309 aaKnown RBP12.68□□□□□ -0.38
SCAF11-209ENST00000547018 TGM5O43548 720 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 CLDN7O95471 211 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 PRLP01236 227 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 IGLV3-27P01718 113 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 C8AP07357 584 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 LPOP22079 712 aaPredicted RBP12.68□□□□□ -0.38
SCAF11-209ENST00000547018 CD70P32970 193 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 KPNA2P52292 529 aaKnown RBP12.68□□□□□ -0.38
SCAF11-209ENST00000547018 TSNAXIP1Q2TAA8 658 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 PTRHD1Q6GMV3 140 aaKnown RBP12.68□□□□□ -0.38
SCAF11-209ENST00000547018 CXorf57Q6NSI4 855 aaKnown RBP12.68□□□□□ -0.38
SCAF11-209ENST00000547018 IZUMO2Q6UXV1 221 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 DSELQ8IZU8 1212 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 UCMAQ8WVF2 138 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 TCEAL4Q96EI5 215 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 FEM1CQ96JP0 617 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 C3orf30Q96M34 536 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 LATS2Q9NRM7 1088 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 ABCB8Q9NUT2 735 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 TAS2R13Q9NYV9 303 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 IL37Q9NZH6 218 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 PKP3Q9Y446 797 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 H3BNC9 293 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 UBDO15205 165 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 KDELR3O43731 214 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 FGF18O76093 207 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 RBP1P09455 135 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 AOC1P19801 751 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 CPOXP36551 454 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 SLC34A1Q06495 639 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 PIWIL4Q7Z3Z4 852 aaKnown RBP12.68□□□□□ -0.38
SCAF11-209ENST00000547018 TSPAN33Q86UF1 283 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 GALNT4Q8N4A0 578 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 KLHL23Q8NBE8 558 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 TOP1MTQ969P6 601 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 LINGO1Q96FE5 620 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 PCDHAC1Q9H158 963 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 HACD3Q9P035 362 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 SLCO3A1Q9UIG8 710 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 TRMT6Q9UJA5 497 aaKnown RBP12.68□□□□□ -0.38
SCAF11-209ENST00000547018 MROH6A6NGR9 719 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 HIDE1A8MVS5 230 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 NEDD8-MDP1E9PL57 170 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 NR5A2O00482 541 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 TPST1O60507 370 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 HNRNPCL1O60812 293 aaKnown RBP12.68□□□□□ -0.38
SCAF11-209ENST00000547018 ZDHHC11BP0C7U3 371 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 COL6A1P12109 1028 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 GDF5P43026 501 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 TSTA3Q13630 321 aaPredicted RBP12.68□□□□□ -0.38
SCAF11-209ENST00000547018 RAB44Q7Z6P3 723 aaPredicted RBP12.68□□□□□ -0.38
SCAF11-209ENST00000547018 FBXO39Q8N4B4 442 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 CDYL2Q8N8U2 506 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 KYQ8NBH2 561 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms