RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 PATE3B3GLJ2 98 aa16.23■□□□□ 0.19
LIMS2-217ENST00000545738 PCCBP05166 539 aa16.23■□□□□ 0.19
LIMS2-217ENST00000545738 PRSS56P0CW18 603 aa16.23■□□□□ 0.19
LIMS2-217ENST00000545738 LPOP22079 712 aaPredicted RBP16.23■□□□□ 0.19
LIMS2-217ENST00000545738 NMBRP28336 390 aa16.23■□□□□ 0.19
LIMS2-217ENST00000545738 CARSP49589 748 aaKnown RBP16.23■□□□□ 0.19
LIMS2-217ENST00000545738 DRG2P55039 364 aaKnown RBP16.23■□□□□ 0.19
LIMS2-217ENST00000545738 XIAPP98170 497 aa16.23■□□□□ 0.19
LIMS2-217ENST00000545738 SGCGQ13326 291 aa16.23■□□□□ 0.19
LIMS2-217ENST00000545738 PEX6Q13608 980 aa16.23■□□□□ 0.19
LIMS2-217ENST00000545738 LRRC14Q15048 493 aa16.23■□□□□ 0.19
LIMS2-217ENST00000545738 GLE1Q53GS7 698 aaKnown RBP16.23■□□□□ 0.19
LIMS2-217ENST00000545738 PEAR1Q5VY43 1037 aaPredicted RBP16.23■□□□□ 0.19
LIMS2-217ENST00000545738 KCTD16Q68DU8 428 aa16.23■□□□□ 0.19
LIMS2-217ENST00000545738 C11orf74Q86VG3 221 aa16.23■□□□□ 0.19
LIMS2-217ENST00000545738 RGL4Q8IZJ4 473 aa16.23■□□□□ 0.19
LIMS2-217ENST00000545738 SLC22A18ASQ8N1D0 253 aa16.23■□□□□ 0.19
LIMS2-217ENST00000545738 ASB12Q8WXK4 309 aa16.23■□□□□ 0.19
LIMS2-217ENST00000545738 MFSD3Q96ES6 412 aa16.23■□□□□ 0.19
LIMS2-217ENST00000545738 LENG8Q96PV6 779 aaPredicted RBP16.23■□□□□ 0.19
LIMS2-217ENST00000545738 RANBP9Q96S59 729 aa16.23■□□□□ 0.19
LIMS2-217ENST00000545738 XAB2Q9HCS7 855 aaKnown RBP16.23■□□□□ 0.19
LIMS2-217ENST00000545738 TM9SF3Q9HD45 589 aa16.23■□□□□ 0.19
LIMS2-217ENST00000545738 FSCN3Q9NQT6 498 aa16.23■□□□□ 0.19
LIMS2-217ENST00000545738 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.23■□□□□ 0.19
LIMS2-217ENST00000545738 PNMA8BQ9ULN7 279 aaPredicted RBP16.23■□□□□ 0.19
LIMS2-217ENST00000545738 V9GYY5 206 aaPredicted RBP16.23■□□□□ 0.19
LIMS2-217ENST00000545738 ZNF292O60281 2723 aa16.23■□□□□ 0.19
LIMS2-217ENST00000545738 ADAMTS9Q9P2N4 1935 aa16.23■□□□□ 0.19
LIMS2-217ENST00000545738 OR51F1A6NGY5 319 aa16.22■□□□□ 0.19
LIMS2-217ENST00000545738 SLU7O95391 586 aaKnown RBP16.22■□□□□ 0.19
LIMS2-217ENST00000545738 PSMA3P25788 255 aa16.22■□□□□ 0.19
LIMS2-217ENST00000545738 NFKBIAP25963 317 aa16.22■□□□□ 0.19
LIMS2-217ENST00000545738 ARNTP27540 789 aa16.22■□□□□ 0.19
LIMS2-217ENST00000545738 INPP5AQ14642 412 aa16.22■□□□□ 0.19
LIMS2-217ENST00000545738 SMAD1Q15797 465 aaKnown RBP16.22■□□□□ 0.19
LIMS2-217ENST00000545738 ESRP1Q6NXG1 681 aaKnown RBP16.22■□□□□ 0.19
LIMS2-217ENST00000545738 PIGKQ92643 395 aa16.22■□□□□ 0.19
LIMS2-217ENST00000545738 AP2M1Q96CW1 435 aa16.22■□□□□ 0.19
LIMS2-217ENST00000545738 CCDC97Q96F63 343 aaPredicted RBP16.22■□□□□ 0.19
LIMS2-217ENST00000545738 FCRL3Q96P31 734 aaPredicted RBP16.22■□□□□ 0.19
LIMS2-217ENST00000545738 LGR4Q9BXB1 951 aa16.22■□□□□ 0.19
LIMS2-217ENST00000545738 IL22Q9GZX6 179 aa16.22■□□□□ 0.19
LIMS2-217ENST00000545738 KCNH6Q9H252 994 aa16.22■□□□□ 0.19
LIMS2-217ENST00000545738 ANKZF1Q9H8Y5 726 aa16.22■□□□□ 0.19
LIMS2-217ENST00000545738 GDF3Q9NR23 364 aa16.22■□□□□ 0.19
LIMS2-217ENST00000545738 TREX1Q9NSU2 369 aa16.22■□□□□ 0.19
LIMS2-217ENST00000545738 IL1RAPL1Q9NZN1 696 aa16.22■□□□□ 0.19
LIMS2-217ENST00000545738 OR1A2Q9Y585 309 aa16.22■□□□□ 0.19
LIMS2-217ENST00000545738 TMEM131Q92545 1883 aa16.22■□□□□ 0.19
LIMS2-217ENST00000545738 PCDH15Q96QU1 1955 aa16.22■□□□□ 0.19
LIMS2-217ENST00000545738 PRAMEF26H0Y7S4 382 aa16.22■□□□□ 0.19
LIMS2-217ENST00000545738 RHOBTB1O94844 696 aa16.22■□□□□ 0.19
LIMS2-217ENST00000545738 ADRA1DP25100 572 aa16.22■□□□□ 0.19
LIMS2-217ENST00000545738 NPY2RP49146 381 aa16.22■□□□□ 0.19
LIMS2-217ENST00000545738 BNC1Q01954 994 aa16.22■□□□□ 0.19
LIMS2-217ENST00000545738 DPTQ07507 201 aa16.22■□□□□ 0.19
LIMS2-217ENST00000545738 PCID2Q5JVF3 399 aa16.22■□□□□ 0.19
LIMS2-217ENST00000545738 UBAP2Q5T6F2 1119 aaKnown RBP16.22■□□□□ 0.19
LIMS2-217ENST00000545738 TSTD2Q5T7W7 516 aa16.22■□□□□ 0.19
LIMS2-217ENST00000545738 FAM151BQ6UXP7 276 aa16.22■□□□□ 0.19
LIMS2-217ENST00000545738 OR13H1Q8NG92 308 aa16.22■□□□□ 0.19
LIMS2-217ENST00000545738 TBATAQ96M53 351 aa16.22■□□□□ 0.19
LIMS2-217ENST00000545738 SRPK1Q96SB4 655 aaKnown RBP16.22■□□□□ 0.19
LIMS2-217ENST00000545738 KIFC1Q9BW19 673 aa16.22■□□□□ 0.19
LIMS2-217ENST00000545738 NLE1Q9NVX2 485 aaPredicted RBP16.22■□□□□ 0.19
LIMS2-217ENST00000545738 PKD2L2Q9NZM6 624 aa16.22■□□□□ 0.19
LIMS2-217ENST00000545738 BFARQ9NZS9 450 aa16.22■□□□□ 0.19
LIMS2-217ENST00000545738 CNOT6Q9ULM6 557 aaKnown RBP16.22■□□□□ 0.19
LIMS2-217ENST00000545738 DMTF1Q9Y222 760 aa16.22■□□□□ 0.19
LIMS2-217ENST00000545738 HEATR9A2RTY3 570 aa16.21■□□□□ 0.19
LIMS2-217ENST00000545738 C2orf81A6NN90 581 aa16.21■□□□□ 0.19
LIMS2-217ENST00000545738 E7ESA3 106 aa16.21■□□□□ 0.19
LIMS2-217ENST00000545738 STX7O15400 261 aaKnown RBP16.21■□□□□ 0.19
LIMS2-217ENST00000545738 CRTAMO95727 393 aa16.21■□□□□ 0.19
LIMS2-217ENST00000545738 MYBL2P10244 700 aa16.21■□□□□ 0.19
LIMS2-217ENST00000545738 CSNK1EP49674 416 aaKnown RBP16.21■□□□□ 0.19
LIMS2-217ENST00000545738 CDKN1CP49918 316 aaPredicted RBP16.21■□□□□ 0.19
LIMS2-217ENST00000545738 DCDC1P59894 354 aa16.21■□□□□ 0.19
LIMS2-217ENST00000545738 PFN3P60673 137 aa16.21■□□□□ 0.19
LIMS2-217ENST00000545738 SARNPP82979 210 aaKnown RBP16.21■□□□□ 0.19
LIMS2-217ENST00000545738 ACVR1Q04771 509 aa16.21■□□□□ 0.19
LIMS2-217ENST00000545738 CALCOCO2Q13137 446 aa16.21■□□□□ 0.19
LIMS2-217ENST00000545738 NAA30Q147X3 362 aaPredicted RBP16.21■□□□□ 0.19
LIMS2-217ENST00000545738 HIF1AQ16665 826 aa16.21■□□□□ 0.19
LIMS2-217ENST00000545738 BBS9Q3SYG4 887 aa16.21■□□□□ 0.19
LIMS2-217ENST00000545738 PNCKQ6P2M8 343 aa16.21■□□□□ 0.19
LIMS2-217ENST00000545738 ABI3BPQ7Z7G0 1075 aa16.21■□□□□ 0.19
LIMS2-217ENST00000545738 TRIM74Q86UV6 250 aa16.21■□□□□ 0.19
LIMS2-217ENST00000545738 DENND6BQ8NEG7 585 aa16.21■□□□□ 0.19
LIMS2-217ENST00000545738 PTCD2Q8WV60 388 aaKnown RBP16.21■□□□□ 0.19
LIMS2-217ENST00000545738 FAM83DQ9H4H8 585 aa16.21■□□□□ 0.19
LIMS2-217ENST00000545738 GPR27Q9NS67 375 aa16.21■□□□□ 0.19
LIMS2-217ENST00000545738 NFKBIL1Q9UBC1 381 aaPredicted RBP16.21■□□□□ 0.19
LIMS2-217ENST00000545738 SOX13Q9UN79 622 aa16.21■□□□□ 0.19
LIMS2-217ENST00000545738 HCN4Q9Y3Q4 1203 aa16.21■□□□□ 0.19
LIMS2-217ENST00000545738 TEX264Q9Y6I9 313 aa16.21■□□□□ 0.19
LIMS2-217ENST00000545738 RALGAPA1Q6GYQ0 2036 aa16.2■□□□□ 0.18
LIMS2-217ENST00000545738 LRP4O75096 1905 aa16.2■□□□□ 0.18
LIMS2-217ENST00000545738 SDR42E2A6NKP2 422 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms