RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 DHPSP49366 369 aaPredicted RBP12.96□□□□□ -0.33
CDCA3-210ENST00000545368 PTPN5P54829 565 aa12.96□□□□□ -0.33
CDCA3-210ENST00000545368 PRAMEP78395 509 aa12.96□□□□□ -0.33
CDCA3-210ENST00000545368 SIM2Q14190 667 aaPredicted RBP12.96□□□□□ -0.33
CDCA3-210ENST00000545368 FGL2Q14314 439 aa12.96□□□□□ -0.33
CDCA3-210ENST00000545368 LRRC14Q15048 493 aa12.96□□□□□ -0.33
CDCA3-210ENST00000545368 PLK5Q496M5 336 aa12.96□□□□□ -0.33
CDCA3-210ENST00000545368 MSS51Q4VC12 460 aa12.96□□□□□ -0.33
CDCA3-210ENST00000545368 LYSMD4Q5XG99 296 aa12.96□□□□□ -0.33
CDCA3-210ENST00000545368 ALS2CLQ60I27 953 aa12.96□□□□□ -0.33
CDCA3-210ENST00000545368 PMS2CLQ68D20 193 aa12.96□□□□□ -0.33
CDCA3-210ENST00000545368 RAET1GQ6H3X3 334 aa12.96□□□□□ -0.33
CDCA3-210ENST00000545368 PRR23BQ6ZRT6 265 aa12.96□□□□□ -0.33
CDCA3-210ENST00000545368 ARMCX6Q7L4S7 300 aa12.96□□□□□ -0.33
CDCA3-210ENST00000545368 SLC41A1Q8IVJ1 513 aa12.96□□□□□ -0.33
CDCA3-210ENST00000545368 RGL4Q8IZJ4 473 aa12.96□□□□□ -0.33
CDCA3-210ENST00000545368 FBXO36Q8NEA4 188 aa12.96□□□□□ -0.33
CDCA3-210ENST00000545368 PYROXD1Q8WU10 500 aa12.96□□□□□ -0.33
CDCA3-210ENST00000545368 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.96□□□□□ -0.331e-6■■■■■ 56.2
CDCA3-210ENST00000545368 ZNF669Q96BR6 464 aaPredicted RBP12.96□□□□□ -0.33
CDCA3-210ENST00000545368 LENG8Q96PV6 779 aaPredicted RBP12.96□□□□□ -0.33
CDCA3-210ENST00000545368 SPATA16Q9BXB7 569 aa12.96□□□□□ -0.33
CDCA3-210ENST00000545368 IRF2BPLQ9H1B7 796 aa12.96□□□□□ -0.33
CDCA3-210ENST00000545368 ZC3H7BQ9UGR2 993 aaKnown RBP12.96□□□□□ -0.33
CDCA3-210ENST00000545368 FKBPLQ9UIM3 349 aa12.96□□□□□ -0.33
CDCA3-210ENST00000545368 CHMP2BQ9UQN3 213 aa12.96□□□□□ -0.33
CDCA3-210ENST00000545368 TEX264Q9Y6I9 313 aa12.96□□□□□ -0.33
CDCA3-210ENST00000545368 RPS6KL1Q9Y6S9 549 aa12.96□□□□□ -0.33
CDCA3-210ENST00000545368 FANCMQ8IYD8 2048 aa12.95□□□□□ -0.34
CDCA3-210ENST00000545368 SPAG17Q6Q759 2223 aa12.95□□□□□ -0.34
CDCA3-210ENST00000545368 PRAMEF26H0Y7S4 382 aa12.95□□□□□ -0.34
CDCA3-210ENST00000545368 H7C0S8 307 aa12.95□□□□□ -0.34
CDCA3-210ENST00000545368 FPGTO14772 594 aa12.95□□□□□ -0.34
CDCA3-210ENST00000545368 TSHRP16473 764 aa12.95□□□□□ -0.34
CDCA3-210ENST00000545368 NMBRP28336 390 aa12.95□□□□□ -0.34
CDCA3-210ENST00000545368 ECHS1P30084 290 aa12.95□□□□□ -0.34
CDCA3-210ENST00000545368 GPR1P46091 355 aa12.95□□□□□ -0.34
CDCA3-210ENST00000545368 DPTQ07507 201 aa12.95□□□□□ -0.34
CDCA3-210ENST00000545368 CBLBQ13191 982 aa12.95□□□□□ -0.34
CDCA3-210ENST00000545368 ITGA9Q13797 1035 aa12.95□□□□□ -0.34
CDCA3-210ENST00000545368 PTPRCAPQ14761 206 aa12.95□□□□□ -0.34
CDCA3-210ENST00000545368 IRF4Q15306 451 aa12.95□□□□□ -0.34
CDCA3-210ENST00000545368 WSCD2Q2TBF2 565 aa12.95□□□□□ -0.34
CDCA3-210ENST00000545368 ANKRD20A4Q4UJ75 823 aa12.95□□□□□ -0.34
CDCA3-210ENST00000545368 HP1BP3Q5SSJ5 553 aaPredicted RBP12.95□□□□□ -0.34
CDCA3-210ENST00000545368 ESRP1Q6NXG1 681 aaKnown RBP12.95□□□□□ -0.34
CDCA3-210ENST00000545368 WDR93Q6P2C0 686 aa12.95□□□□□ -0.34
CDCA3-210ENST00000545368 AFTPHQ6ULP2 937 aa12.95□□□□□ -0.34
CDCA3-210ENST00000545368 FAM151BQ6UXP7 276 aa12.95□□□□□ -0.34
CDCA3-210ENST00000545368 ANKMY2Q8IV38 441 aa12.95□□□□□ -0.34
CDCA3-210ENST00000545368 AGGF1Q8N302 714 aaeCLIP12.95□□□□□ -0.34
CDCA3-210ENST00000545368 TRAM1L1Q8N609 369 aa12.95□□□□□ -0.34
CDCA3-210ENST00000545368 TP53I13Q8NBR0 393 aaPredicted RBP12.95□□□□□ -0.34
CDCA3-210ENST00000545368 GPR26Q8NDV2 337 aa12.95□□□□□ -0.34
CDCA3-210ENST00000545368 OR13J1Q8NGT2 312 aa12.95□□□□□ -0.34
CDCA3-210ENST00000545368 MFSD3Q96ES6 412 aa12.95□□□□□ -0.34
CDCA3-210ENST00000545368 CFAP36Q96G28 342 aa12.95□□□□□ -0.34
CDCA3-210ENST00000545368 SERAC1Q96JX3 654 aa12.95□□□□□ -0.34
CDCA3-210ENST00000545368 ZC3H10Q96K80 434 aaKnown RBP12.95□□□□□ -0.34
CDCA3-210ENST00000545368 ZNF778Q96MU6 729 aa12.95□□□□□ -0.34
CDCA3-210ENST00000545368 MYOCQ99972 504 aa12.95□□□□□ -0.34
CDCA3-210ENST00000545368 ZSCAN5AQ9BUG6 496 aa12.95□□□□□ -0.34
CDCA3-210ENST00000545368 RIOK2Q9BVS4 552 aaKnown RBP12.95□□□□□ -0.34
CDCA3-210ENST00000545368 MIR1-1HGQ9H1L0 117 aa12.95□□□□□ -0.34
CDCA3-210ENST00000545368 ABCG8Q9H221 673 aa12.95□□□□□ -0.34
CDCA3-210ENST00000545368 KCNH6Q9H252 994 aa12.95□□□□□ -0.34
CDCA3-210ENST00000545368 FZD3Q9NPG1 666 aa12.95□□□□□ -0.34
CDCA3-210ENST00000545368 TREX1Q9NSU2 369 aa12.95□□□□□ -0.34
CDCA3-210ENST00000545368 SLC2A6Q9UGQ3 507 aa12.95□□□□□ -0.34
CDCA3-210ENST00000545368 RAB23Q9ULC3 237 aa12.95□□□□□ -0.34
CDCA3-210ENST00000545368 SLC30A1Q9Y6M5 507 aa12.95□□□□□ -0.34
CDCA3-210ENST00000545368 ABCA7Q8IZY2 2146 aa12.94□□□□□ -0.34
CDCA3-210ENST00000545368 SRP72O76094 671 aaKnown RBP12.94□□□□□ -0.34
CDCA3-210ENST00000545368 PRAMEF1O95521 474 aa12.94□□□□□ -0.34
CDCA3-210ENST00000545368 ITGALP20701 1170 aa12.94□□□□□ -0.34
CDCA3-210ENST00000545368 PSMA3P25788 255 aa12.94□□□□□ -0.34
CDCA3-210ENST00000545368 MC4RP32245 332 aa12.94□□□□□ -0.34
CDCA3-210ENST00000545368 DPP6P42658 865 aa12.94□□□□□ -0.34
CDCA3-210ENST00000545368 PTGER3P43115 390 aa12.94□□□□□ -0.34
CDCA3-210ENST00000545368 VSNL1P62760 191 aa12.94□□□□□ -0.34
CDCA3-210ENST00000545368 ACVR1Q04771 509 aa12.94□□□□□ -0.34
CDCA3-210ENST00000545368 STAT4Q14765 748 aa12.94□□□□□ -0.34
CDCA3-210ENST00000545368 SLMAPQ14BN4 828 aa12.94□□□□□ -0.34
CDCA3-210ENST00000545368 FASTKD3Q14CZ7 662 aaKnown RBP12.94□□□□□ -0.34
CDCA3-210ENST00000545368 SPANXN3Q5MJ09 141 aa12.94□□□□□ -0.34
CDCA3-210ENST00000545368 HENMT1Q5T8I9 393 aaKnown RBP12.94□□□□□ -0.34
CDCA3-210ENST00000545368 PDPK2PQ6A1A2 396 aa12.94□□□□□ -0.34
CDCA3-210ENST00000545368 KIAA0930Q6ICG6 404 aaPredicted RBP12.94□□□□□ -0.34
CDCA3-210ENST00000545368 CES3Q6UWW8 571 aa12.94□□□□□ -0.34
CDCA3-210ENST00000545368 RFLNAQ6ZTI6 216 aa12.94□□□□□ -0.34
CDCA3-210ENST00000545368 TMEM135Q86UB9 458 aa12.94□□□□□ -0.34
CDCA3-210ENST00000545368 NLRP8Q86W28 1048 aa12.94□□□□□ -0.34
CDCA3-210ENST00000545368 PALM2Q8IXS6 379 aa12.94□□□□□ -0.34
CDCA3-210ENST00000545368 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.94□□□□□ -0.34
CDCA3-210ENST00000545368 PRSS33Q8NF86 280 aa12.94□□□□□ -0.34
CDCA3-210ENST00000545368 OR6P1Q8NGX9 317 aa12.94□□□□□ -0.34
CDCA3-210ENST00000545368 GABPB2Q8TAK5 448 aaPredicted RBP12.94□□□□□ -0.34
CDCA3-210ENST00000545368 FAM174AQ8TBP5 190 aa12.94□□□□□ -0.34
CDCA3-210ENST00000545368 DTX3LQ8TDB6 740 aa12.94□□□□□ -0.34
CDCA3-210ENST00000545368 SCAMP4Q969E2 229 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms