RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 SYNDIG1Q9H7V2 258 aa6.84□□□□□ -1.31
LDHA-223ENST00000545215 MLXIPLQ9NP71 852 aa6.84□□□□□ -1.31
LDHA-223ENST00000545215 DPP3Q9NY33 737 aa6.84□□□□□ -1.31
LDHA-223ENST00000545215 TRPM5Q9NZQ8 1165 aa6.84□□□□□ -1.31
LDHA-223ENST00000545215 LUZP4Q9P127 313 aa6.84□□□□□ -1.31
LDHA-223ENST00000545215 ANK2Q01484 3957 aa6.84□□□□□ -1.31
LDHA-223ENST00000545215 SCN1AP35498 2009 aa6.83□□□□□ -1.32
LDHA-223ENST00000545215 TRIM49BA6NDI0 452 aa6.83□□□□□ -1.32
LDHA-223ENST00000545215 ZNF840PA6NDX5 716 aa6.83□□□□□ -1.32
LDHA-223ENST00000545215 FAM171A2A8MVW0 826 aa6.83□□□□□ -1.32
LDHA-223ENST00000545215 LRCH4O75427 683 aa6.83□□□□□ -1.32
LDHA-223ENST00000545215 OAS1P00973 400 aaKnown RBP6.83□□□□□ -1.32
LDHA-223ENST00000545215 TNNC2P02585 160 aa6.83□□□□□ -1.32
LDHA-223ENST00000545215 PF4V1P10720 104 aa6.83□□□□□ -1.32
LDHA-223ENST00000545215 PNPLA4P41247 253 aa6.83□□□□□ -1.32
LDHA-223ENST00000545215 MTIF2P46199 727 aaKnown RBP6.83□□□□□ -1.32
LDHA-223ENST00000545215 VAMP7P51809 220 aa6.83□□□□□ -1.32
LDHA-223ENST00000545215 PGDP52209 483 aa6.83□□□□□ -1.32
LDHA-223ENST00000545215 TERF1P54274 439 aa6.83□□□□□ -1.32
LDHA-223ENST00000545215 PMS2P54278 862 aa6.83□□□□□ -1.32
LDHA-223ENST00000545215 IRF9Q00978 393 aa6.83□□□□□ -1.32
LDHA-223ENST00000545215 TSPY1Q01534 308 aa6.83□□□□□ -1.32
LDHA-223ENST00000545215 ZFP36L1Q07352 338 aaKnown RBP6.83□□□□□ -1.32
LDHA-223ENST00000545215 ODF1Q14990 250 aa6.83□□□□□ -1.32
LDHA-223ENST00000545215 IQCB1Q15051 598 aa6.83□□□□□ -1.32
LDHA-223ENST00000545215 MAN2A1Q16706 1144 aa6.83□□□□□ -1.32
LDHA-223ENST00000545215 FILIP1LQ4L180 1135 aa6.83□□□□□ -1.32
LDHA-223ENST00000545215 TCP11X2Q5H9J9 407 aa6.83□□□□□ -1.32
LDHA-223ENST00000545215 CRELD2Q6UXH1 353 aaPredicted RBP6.83□□□□□ -1.32
LDHA-223ENST00000545215 ZNF517Q6ZMY9 492 aaPredicted RBP6.83□□□□□ -1.32
LDHA-223ENST00000545215 CBWD2Q8IUF1 395 aa6.83□□□□□ -1.32
LDHA-223ENST00000545215 DCP1BQ8IZD4 617 aaKnown RBP6.83□□□□□ -1.32
LDHA-223ENST00000545215 AOPEPQ8N6M6 819 aa6.83□□□□□ -1.32
LDHA-223ENST00000545215 PARD3BQ8TEW8 1205 aa6.83□□□□□ -1.32
LDHA-223ENST00000545215 KIAA1143Q96AT1 154 aaPredicted RBP6.83□□□□□ -1.32
LDHA-223ENST00000545215 ANKRD36BP1Q96IX9 119 aa6.83□□□□□ -1.32
LDHA-223ENST00000545215 CGRRF1Q99675 332 aa6.83□□□□□ -1.32
LDHA-223ENST00000545215 BARD1Q99728 777 aaKnown RBP6.83□□□□□ -1.32
LDHA-223ENST00000545215 ZNF700Q9H0M5 742 aa6.83□□□□□ -1.32
LDHA-223ENST00000545215 IKZF4Q9H2S9 585 aa6.83□□□□□ -1.32
LDHA-223ENST00000545215 ARHGAP20Q9P2F6 1191 aa6.83□□□□□ -1.32
LDHA-223ENST00000545215 ITGA11Q9UKX5 1188 aa6.83□□□□□ -1.32
LDHA-223ENST00000545215 SCML1Q9UN30 329 aa6.83□□□□□ -1.32
LDHA-223ENST00000545215 OSGIN2Q9Y236 505 aa6.83□□□□□ -1.32
LDHA-223ENST00000545215 PCDHGA9Q9Y5G4 932 aaKnown RBP6.83□□□□□ -1.32
LDHA-223ENST00000545215 PCDHGA6Q9Y5G7 932 aa6.83□□□□□ -1.32
LDHA-223ENST00000545215 PCDHGA3Q9Y5H0 932 aa6.83□□□□□ -1.32
LDHA-223ENST00000545215 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.83□□□□□ -1.32
LDHA-223ENST00000545215 CSNK1G3Q9Y6M4 447 aa6.83□□□□□ -1.32
LDHA-223ENST00000545215 A0A1B0GUH1 482 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 GTPBP10A4D1E9 387 aaKnown RBP6.82□□□□□ -1.32
LDHA-223ENST00000545215 GOLGA8IPA6NC78 632 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 ZSCAN5CA6NGD5 496 aaPredicted RBP6.82□□□□□ -1.32
LDHA-223ENST00000545215 GOLGA8JA6NMD2 632 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 VSTM5A8MXK1 200 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 KPNA7A9QM74 516 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 LY6G6DO95868 133 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 KRT19P08727 400 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 TMEM191BP0C7N4 346 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 DLATP10515 647 aaKnown RBP6.82□□□□□ -1.32
LDHA-223ENST00000545215 MBL2P11226 248 aaPredicted RBP6.82□□□□□ -1.32
LDHA-223ENST00000545215 ZNF18P17022 549 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 KRT15P19012 456 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 TNNI1P19237 187 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 SLC9A1P19634 815 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 CYP2F1P24903 491 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 ATICP31939 592 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 LSP1P33241 339 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 PPP3CCP48454 512 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 CASP4P49662 377 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 EGR3Q06889 387 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 CDK18Q07002 472 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 GEN1Q17RS7 908 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 PDLIM3Q53GG5 364 aaPredicted RBP6.82□□□□□ -1.32
LDHA-223ENST00000545215 FKBP15Q5T1M5 1219 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 PAPD7Q5XG87 772 aaKnown RBP6.82□□□□□ -1.32
LDHA-223ENST00000545215 HLA-DQA1Q5Y7H0 255 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 KRT39Q6A163 491 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 PGM2L1Q6PCE3 622 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 SERPINA13PQ6UXR4 307 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 ARHGAP36Q6ZRI8 547 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 RD3Q7Z3Z2 195 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 CD163Q86VB7 1156 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 CREG2Q8IUH2 290 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 APLFQ8IW19 511 aaPredicted RBP6.82□□□□□ -1.32
LDHA-223ENST00000545215 CMIPQ8IY22 773 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 LRRC52Q8N7C0 313 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 ZNF610Q8N9Z0 462 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 CCDC150Q8NCX0 1101 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 ST6GALNAC3Q8NDV1 305 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 STARD8Q92502 1023 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 TAF4BQ92750 862 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 GOLGA1Q92805 767 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 PNPLA2Q96AD5 504 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 FAM81BQ96LP2 452 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 MED15Q96RN5 788 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 TUBGCP2Q9BSJ2 902 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 IMPG2Q9BZV3 1241 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 NEUROG2Q9H2A3 272 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 TMEM8AQ9HCN3 771 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms