RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 PTPRCAPQ14761 206 aa13.05□□□□□ -0.32
DDX11-227ENST00000544652 ACOX1Q15067 660 aa13.05□□□□□ -0.32
DDX11-227ENST00000544652 ERCC6LQ2NKX8 1250 aa13.05□□□□□ -0.32
DDX11-227ENST00000544652 CCDC38Q502W7 563 aa13.05□□□□□ -0.32
DDX11-227ENST00000544652 SETMARQ53H47 684 aaPredicted RBP13.05□□□□□ -0.32
DDX11-227ENST00000544652 DNAJC21Q5F1R6 531 aaKnown RBP13.05□□□□□ -0.32
DDX11-227ENST00000544652 HENMT1Q5T8I9 393 aaKnown RBP13.05□□□□□ -0.32
DDX11-227ENST00000544652 ZDHHC20Q5W0Z9 365 aa13.05□□□□□ -0.32
DDX11-227ENST00000544652 DENND2CQ68D51 928 aa13.05□□□□□ -0.32
DDX11-227ENST00000544652 ESRP1Q6NXG1 681 aaKnown RBP13.05□□□□□ -0.32
DDX11-227ENST00000544652 CENPUQ71F23 418 aa13.05□□□□□ -0.32
DDX11-227ENST00000544652 LPCAT2Q7L5N7 544 aa13.05□□□□□ -0.32
DDX11-227ENST00000544652 TMEFF1Q8IYR6 380 aa13.05□□□□□ -0.32
DDX11-227ENST00000544652 GPR26Q8NDV2 337 aa13.05□□□□□ -0.32
DDX11-227ENST00000544652 OR4K2Q8NGD2 314 aa13.05□□□□□ -0.32
DDX11-227ENST00000544652 OR13C4Q8NGS5 318 aa13.05□□□□□ -0.32
DDX11-227ENST00000544652 OR13J1Q8NGT2 312 aa13.05□□□□□ -0.32
DDX11-227ENST00000544652 NUS1Q96E22 293 aa13.05□□□□□ -0.32
DDX11-227ENST00000544652 ZNF778Q96MU6 729 aa13.05□□□□□ -0.32
DDX11-227ENST00000544652 EBNA1BP2Q99848 306 aaKnown RBP13.05□□□□□ -0.32
DDX11-227ENST00000544652 WDR83Q9BRX9 315 aaKnown RBP13.05□□□□□ -0.32
DDX11-227ENST00000544652 NAT9Q9BTE0 207 aa13.05□□□□□ -0.32
DDX11-227ENST00000544652 C1QTNF7Q9BXJ2 289 aa13.05□□□□□ -0.32
DDX11-227ENST00000544652 ABCG8Q9H221 673 aa13.05□□□□□ -0.32
DDX11-227ENST00000544652 EPC1Q9H2F5 836 aa13.05□□□□□ -0.32
DDX11-227ENST00000544652 CHRAC1Q9NRG0 131 aa13.05□□□□□ -0.32
DDX11-227ENST00000544652 PKP3Q9Y446 797 aa13.05□□□□□ -0.32
DDX11-227ENST00000544652 KCTD3Q9Y597 815 aa13.05□□□□□ -0.32
DDX11-227ENST00000544652 GAPDHSO14556 408 aaPredicted RBP13.04□□□□□ -0.32
DDX11-227ENST00000544652 STX7O15400 261 aaKnown RBP13.04□□□□□ -0.32
DDX11-227ENST00000544652 BUD23O43709 281 aaKnown RBP13.04□□□□□ -0.32
DDX11-227ENST00000544652 BANF1O75531 89 aa13.04□□□□□ -0.32
DDX11-227ENST00000544652 USP1O94782 785 aa13.04□□□□□ -0.32
DDX11-227ENST00000544652 FSBPO95073 299 aa13.04□□□□□ -0.32
DDX11-227ENST00000544652 HNRNPA2B1P22626 353 aaKnown RBP13.04□□□□□ -0.32
DDX11-227ENST00000544652 CD27P26842 260 aa13.04□□□□□ -0.32
DDX11-227ENST00000544652 NMBRP28336 390 aa13.04□□□□□ -0.32
DDX11-227ENST00000544652 TEAD1P28347 426 aa13.04□□□□□ -0.32
DDX11-227ENST00000544652 MAT2AP31153 395 aaKnown RBP13.04□□□□□ -0.32
DDX11-227ENST00000544652 SPAM1P38567 509 aa13.04□□□□□ -0.32
DDX11-227ENST00000544652 ELK3P41970 407 aa13.04□□□□□ -0.32
DDX11-227ENST00000544652 XIAPP98170 497 aa13.04□□□□□ -0.32
DDX11-227ENST00000544652 PDIA2Q13087 525 aaKnown RBP13.04□□□□□ -0.32
DDX11-227ENST00000544652 SGCGQ13326 291 aa13.04□□□□□ -0.32
DDX11-227ENST00000544652 SEPT6Q14141 434 aa13.04□□□□□ -0.32
DDX11-227ENST00000544652 SKIDA1Q1XH10 827 aa13.04□□□□□ -0.32
DDX11-227ENST00000544652 WSCD2Q2TBF2 565 aa13.04□□□□□ -0.32
DDX11-227ENST00000544652 BBS9Q3SYG4 887 aa13.04□□□□□ -0.32
DDX11-227ENST00000544652 WDR93Q6P2C0 686 aa13.04□□□□□ -0.32
DDX11-227ENST00000544652 ZC3H14Q6PJT7 736 aaKnown RBP13.04□□□□□ -0.32
DDX11-227ENST00000544652 RELL1Q8IUW5 271 aa13.04□□□□□ -0.32
DDX11-227ENST00000544652 CCNJLQ8IV13 435 aa13.04□□□□□ -0.32
DDX11-227ENST00000544652 IGDCC3Q8IVU1 814 aa13.04□□□□□ -0.32
DDX11-227ENST00000544652 TMEM145Q8NBT3 493 aa13.04□□□□□ -0.32
DDX11-227ENST00000544652 C1orf216Q8TAB5 229 aa13.04□□□□□ -0.32
DDX11-227ENST00000544652 IFT81Q8WYA0 676 aa13.04□□□□□ -0.32
DDX11-227ENST00000544652 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.04□□□□□ -0.32
DDX11-227ENST00000544652 KLK6Q92876 244 aa13.04□□□□□ -0.32
DDX11-227ENST00000544652 MFSD3Q96ES6 412 aa13.04□□□□□ -0.32
DDX11-227ENST00000544652 STAMBPL1Q96FJ0 436 aa13.04□□□□□ -0.32
DDX11-227ENST00000544652 CDKN2AIPNLQ96HQ2 116 aa13.04□□□□□ -0.32
DDX11-227ENST00000544652 SGSM3Q96HU1 749 aa13.04□□□□□ -0.32
DDX11-227ENST00000544652 DNAJC1Q96KC8 554 aaKnown RBP13.04□□□□□ -0.32
DDX11-227ENST00000544652 HSPA12BQ96MM6 686 aa13.04□□□□□ -0.32
DDX11-227ENST00000544652 FMO2Q99518 471 aa13.04□□□□□ -0.32
DDX11-227ENST00000544652 TSPYL1Q9H0U9 437 aa13.04□□□□□ -0.32
DDX11-227ENST00000544652 FAM83DQ9H4H8 585 aa13.04□□□□□ -0.32
DDX11-227ENST00000544652 BPIFA1Q9NP55 256 aa13.04□□□□□ -0.32
DDX11-227ENST00000544652 SAMD15Q9P1V8 674 aa13.04□□□□□ -0.32
DDX11-227ENST00000544652 MTRF1LQ9UGC7 380 aaKnown RBP13.04□□□□□ -0.32
DDX11-227ENST00000544652 AGAP14A8MT82 685 aa13.03□□□□□ -0.32
DDX11-227ENST00000544652 PRAMEF26H0Y7S4 382 aa13.03□□□□□ -0.32
DDX11-227ENST00000544652 RAD51BO15315 384 aa13.03□□□□□ -0.32
DDX11-227ENST00000544652 SLC31A1O15431 190 aa13.03□□□□□ -0.32
DDX11-227ENST00000544652 RHOBTB1O94844 696 aa13.03□□□□□ -0.32
DDX11-227ENST00000544652 SOD1P00441 154 aa13.03□□□□□ -0.32
DDX11-227ENST00000544652 SLC4A1P02730 911 aa13.03□□□□□ -0.32
DDX11-227ENST00000544652 PGAM1P18669 254 aa13.03□□□□□ -0.32
DDX11-227ENST00000544652 IGFALSP35858 605 aa13.03□□□□□ -0.32
DDX11-227ENST00000544652 PTGER3P43115 390 aa13.03□□□□□ -0.32
DDX11-227ENST00000544652 PEX6Q13608 980 aa13.03□□□□□ -0.32
DDX11-227ENST00000544652 SIM2Q14190 667 aaPredicted RBP13.03□□□□□ -0.32
DDX11-227ENST00000544652 HLTFQ14527 1009 aaKnown RBP eCLIP13.03□□□□□ -0.32
DDX11-227ENST00000544652 FASTKD3Q14CZ7 662 aaKnown RBP13.03□□□□□ -0.32
DDX11-227ENST00000544652 LRRC14Q15048 493 aa13.03□□□□□ -0.32
DDX11-227ENST00000544652 IRF4Q15306 451 aa13.03□□□□□ -0.32
DDX11-227ENST00000544652 PEAR1Q5VY43 1037 aaPredicted RBP13.03□□□□□ -0.32
DDX11-227ENST00000544652 PDPK2PQ6A1A2 396 aa13.03□□□□□ -0.32
DDX11-227ENST00000544652 CEP128Q6ZU80 1094 aa13.03□□□□□ -0.32
DDX11-227ENST00000544652 PELI3Q8N2H9 469 aa13.03□□□□□ -0.32
DDX11-227ENST00000544652 TRAM1L1Q8N609 369 aa13.03□□□□□ -0.32
DDX11-227ENST00000544652 DEFB119Q8N690 84 aa13.03□□□□□ -0.32
DDX11-227ENST00000544652 GPR161Q8N6U8 529 aaKnown RBP13.03□□□□□ -0.32
DDX11-227ENST00000544652 SCAMP4Q969E2 229 aa13.03□□□□□ -0.32
DDX11-227ENST00000544652 AP2M1Q96CW1 435 aa13.03□□□□□ -0.32
DDX11-227ENST00000544652 IRF2BPLQ9H1B7 796 aa13.03□□□□□ -0.32
DDX11-227ENST00000544652 PLAC1Q9HBJ0 212 aa13.03□□□□□ -0.32
DDX11-227ENST00000544652 IL26Q9NPH9 171 aa13.03□□□□□ -0.32
DDX11-227ENST00000544652 SLC2A6Q9UGQ3 507 aa13.03□□□□□ -0.32
DDX11-227ENST00000544652 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms