RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 P3H4Q92791 437 aa13.87□□□□□ -0.19
VAMP1-208ENST00000544432 SRPK1Q96SB4 655 aaKnown RBP13.87□□□□□ -0.19
VAMP1-208ENST00000544432 VAT1Q99536 393 aa13.87□□□□□ -0.19
VAMP1-208ENST00000544432 TMEM168Q9H0V1 697 aa13.87□□□□□ -0.19
VAMP1-208ENST00000544432 CYP4F12Q9HCS2 524 aa13.87□□□□□ -0.19
VAMP1-208ENST00000544432 MRPL40Q9NQ50 206 aaKnown RBP13.87□□□□□ -0.19
VAMP1-208ENST00000544432 SAE1Q9UBE0 346 aaPredicted RBP13.87□□□□□ -0.19
VAMP1-208ENST00000544432 DUSP10Q9Y6W6 482 aa13.87□□□□□ -0.19
VAMP1-208ENST00000544432 URB1O60287 2271 aaKnown RBP13.87□□□□□ -0.19
VAMP1-208ENST00000544432 A0A0U1RQS6 177 aa13.86□□□□□ -0.19
VAMP1-208ENST00000544432 C1orf232A0A0U1RR37 186 aa13.86□□□□□ -0.19
VAMP1-208ENST00000544432 CCDC66A2RUB6 948 aa13.86□□□□□ -0.19
VAMP1-208ENST00000544432 FUCA1P04066 466 aa13.86□□□□□ -0.19
VAMP1-208ENST00000544432 PECAM1P16284 738 aaPredicted RBP13.86□□□□□ -0.19
VAMP1-208ENST00000544432 CTNNA2P26232 953 aa13.86□□□□□ -0.19
VAMP1-208ENST00000544432 PTPN7P35236 360 aa13.86□□□□□ -0.19
VAMP1-208ENST00000544432 MARCKSL1P49006 195 aa13.86□□□□□ -0.19
VAMP1-208ENST00000544432 SPINT3P49223 89 aa13.86□□□□□ -0.19
VAMP1-208ENST00000544432 WASHC5Q12768 1159 aa13.86□□□□□ -0.19
VAMP1-208ENST00000544432 XRCC4Q13426 336 aa13.86□□□□□ -0.19
VAMP1-208ENST00000544432 PEX6Q13608 980 aa13.86□□□□□ -0.19
VAMP1-208ENST00000544432 PERM1Q5SV97 790 aa13.86□□□□□ -0.19
VAMP1-208ENST00000544432 BBS12Q6ZW61 710 aa13.86□□□□□ -0.19
VAMP1-208ENST00000544432 TXLNBQ8N3L3 684 aa13.86□□□□□ -0.19
VAMP1-208ENST00000544432 LRRC57Q8N9N7 239 aa13.86□□□□□ -0.19
VAMP1-208ENST00000544432 KYQ8NBH2 561 aa13.86□□□□□ -0.19
VAMP1-208ENST00000544432 FAM46DQ8NEK8 389 aa13.86□□□□□ -0.19
VAMP1-208ENST00000544432 KIAA1524Q8TCG1 905 aa13.86□□□□□ -0.19
VAMP1-208ENST00000544432 CCHCR1Q8TD31 782 aa13.86□□□□□ -0.19
VAMP1-208ENST00000544432 SCAMP4Q969E2 229 aa13.86□□□□□ -0.19
VAMP1-208ENST00000544432 COX14Q96I36 57 aa13.86□□□□□ -0.19
VAMP1-208ENST00000544432 GSDMCQ9BYG8 508 aa13.86□□□□□ -0.19
VAMP1-208ENST00000544432 CEP41Q9BYV8 373 aa13.86□□□□□ -0.19
VAMP1-208ENST00000544432 LACRTQ9GZZ8 138 aa13.86□□□□□ -0.19
VAMP1-208ENST00000544432 CDH19Q9H159 772 aa13.86□□□□□ -0.19
VAMP1-208ENST00000544432 CARS2Q9HA77 564 aaKnown RBP13.86□□□□□ -0.19
VAMP1-208ENST00000544432 MAGEE1Q9HCI5 957 aa13.86□□□□□ -0.19
VAMP1-208ENST00000544432 PKD2L2Q9NZM6 624 aa13.86□□□□□ -0.19
VAMP1-208ENST00000544432 SEPT10Q9P0V9 454 aa13.86□□□□□ -0.19
VAMP1-208ENST00000544432 GULP1Q9UBP9 304 aa13.86□□□□□ -0.19
VAMP1-208ENST00000544432 CD84Q9UIB8 345 aa13.86□□□□□ -0.19
VAMP1-208ENST00000544432 LAMA5O15230 3695 aa13.86□□□□□ -0.19
VAMP1-208ENST00000544432 LRP4O75096 1905 aa13.86□□□□□ -0.19
VAMP1-208ENST00000544432 GOLGA6CA6NDK9 693 aa13.85□□□□□ -0.19
VAMP1-208ENST00000544432 GOLGA6BA6NDN3 693 aa13.85□□□□□ -0.19
VAMP1-208ENST00000544432 APOC4-APOC2K7ER74 178 aa13.85□□□□□ -0.19
VAMP1-208ENST00000544432 NTN3O00634 580 aaPredicted RBP13.85□□□□□ -0.19
VAMP1-208ENST00000544432 CSO75390 466 aaKnown RBP13.85□□□□□ -0.19
VAMP1-208ENST00000544432 NDST3O95803 873 aa13.85□□□□□ -0.19
VAMP1-208ENST00000544432 EPOP01588 193 aa13.85□□□□□ -0.19
VAMP1-208ENST00000544432 APOC2P02655 101 aa13.85□□□□□ -0.19
VAMP1-208ENST00000544432 GOLGA6DP0CG33 693 aa13.85□□□□□ -0.19
VAMP1-208ENST00000544432 PNLIPP16233 465 aa13.85□□□□□ -0.19
VAMP1-208ENST00000544432 CD68P34810 354 aaPredicted RBP13.85□□□□□ -0.19
VAMP1-208ENST00000544432 NAP1L1P55209 391 aaKnown RBP13.85□□□□□ -0.19
VAMP1-208ENST00000544432 ISXQ2M1V0 245 aa13.85□□□□□ -0.19
VAMP1-208ENST00000544432 HENMT1Q5T8I9 393 aaKnown RBP13.85□□□□□ -0.19
VAMP1-208ENST00000544432 C17orf82Q86X59 251 aaPredicted RBP13.85□□□□□ -0.19
VAMP1-208ENST00000544432 NRROSQ86YC3 692 aa13.85□□□□□ -0.19
VAMP1-208ENST00000544432 CCDC50Q8IVM0 306 aa13.85□□□□□ -0.19
VAMP1-208ENST00000544432 HIC2Q96JB3 615 aa13.85□□□□□ -0.19
VAMP1-208ENST00000544432 QKIQ96PU8 341 aaKnown RBP eCLIP13.85□□□□□ -0.19
VAMP1-208ENST00000544432 WDR24Q96S15 920 aa13.85□□□□□ -0.19
VAMP1-208ENST00000544432 CCDC3Q9BQI4 270 aa13.85□□□□□ -0.19
VAMP1-208ENST00000544432 RIOK2Q9BVS4 552 aaKnown RBP13.85□□□□□ -0.19
VAMP1-208ENST00000544432 FAM83DQ9H4H8 585 aa13.85□□□□□ -0.19
VAMP1-208ENST00000544432 ZFYVE1Q9HBF4 777 aa13.85□□□□□ -0.19
VAMP1-208ENST00000544432 RAD18Q9NS91 495 aa13.85□□□□□ -0.19
VAMP1-208ENST00000544432 GOLGA6AQ9NYA3 693 aa13.85□□□□□ -0.19
VAMP1-208ENST00000544432 FAM153AQ9UHL3 310 aa13.85□□□□□ -0.19
VAMP1-208ENST00000544432 MOSPD1Q9UJG1 213 aa13.85□□□□□ -0.19
VAMP1-208ENST00000544432 APPL1Q9UKG1 709 aa13.85□□□□□ -0.19
VAMP1-208ENST00000544432 TRHDEQ9UKU6 1024 aa13.85□□□□□ -0.19
VAMP1-208ENST00000544432 SUFUQ9UMX1 484 aa13.85□□□□□ -0.19
VAMP1-208ENST00000544432 RP1P56715 2156 aa13.85□□□□□ -0.19
VAMP1-208ENST00000544432 MYLKQ15746 1914 aa13.84□□□□□ -0.19
VAMP1-208ENST00000544432 NOBOXO60393 691 aa13.84□□□□□ -0.19
VAMP1-208ENST00000544432 MT-CYBP00156 380 aaPredicted RBP13.84□□□□□ -0.19
VAMP1-208ENST00000544432 GLB1P16278 677 aa13.84□□□□□ -0.19
VAMP1-208ENST00000544432 LSSP48449 732 aa13.84□□□□□ -0.19
VAMP1-208ENST00000544432 RWDD2BP57060 319 aa13.84□□□□□ -0.19
VAMP1-208ENST00000544432 ILF3Q12906 894 aaKnown RBP eCLIP13.84□□□□□ -0.19
VAMP1-208ENST00000544432 HLTFQ14527 1009 aaKnown RBP eCLIP13.84□□□□□ -0.19
VAMP1-208ENST00000544432 LLGL1Q15334 1064 aa13.84□□□□□ -0.19
VAMP1-208ENST00000544432 CERCAMQ5T4B2 595 aa13.84□□□□□ -0.19
VAMP1-208ENST00000544432 CCDC70Q6NSX1 233 aa13.84□□□□□ -0.19
VAMP1-208ENST00000544432 RBM44Q6ZP01 1051 aaKnown RBP13.84□□□□□ -0.19
VAMP1-208ENST00000544432 B4GALNT4Q76KP1 1039 aa13.84□□□□□ -0.19
VAMP1-208ENST00000544432 TMC3Q7Z5M5 1100 aa13.84□□□□□ -0.19
VAMP1-208ENST00000544432 KIAA1328Q86T90 577 aa13.84□□□□□ -0.19
VAMP1-208ENST00000544432 LSMEM2Q8N112 164 aa13.84□□□□□ -0.19
VAMP1-208ENST00000544432 ACRBPQ8NEB7 543 aa13.84□□□□□ -0.19
VAMP1-208ENST00000544432 SPATA22Q8NHS9 363 aa13.84□□□□□ -0.19
VAMP1-208ENST00000544432 CCL4L1Q8NHW4 92 aa13.84□□□□□ -0.19
VAMP1-208ENST00000544432 UBE2Q2Q8WVN8 375 aa13.84□□□□□ -0.19
VAMP1-208ENST00000544432 HTR3CQ8WXA8 447 aa13.84□□□□□ -0.19
VAMP1-208ENST00000544432 EID2BQ96D98 161 aa13.84□□□□□ -0.19
VAMP1-208ENST00000544432 FCRL5Q96RD9 977 aa13.84□□□□□ -0.19
VAMP1-208ENST00000544432 AGAP2Q99490 1192 aa13.84□□□□□ -0.19
VAMP1-208ENST00000544432 HEMGNQ9BXL5 484 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms