RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 PRICKLE1Q96MT3 831 aaPredicted RBP15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 SIKE1Q9BRV8 207 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 MID2Q9UJV3 735 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 CCDC160A6NGH7 325 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 ZSCAN9O15535 394 aaPredicted RBP15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 SRP72O76094 671 aaKnown RBP15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 SEC24AO95486 1093 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 VCLP18206 1134 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 MZF1P28698 734 aaPredicted RBP15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 GGT5P36269 586 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 SLC7A2P52569 658 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 PFKPQ01813 784 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 PIWIL4Q7Z3Z4 852 aaKnown RBP15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 GLT6D1Q7Z4J2 308 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 PDSS2Q86YH6 399 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 ERLEC1Q96DZ1 483 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 CDKN2AIPNLQ96HQ2 116 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 AKTIPQ9H8T0 292 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 EFCAB1Q9HAE3 211 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 FAM8A1Q9UBU6 413 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 EVLQ9UI08 416 aaPredicted RBP15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 COMMD10Q9Y6G5 202 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 KRT87PA6NCN2 255 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 SLC38A8A6NNN8 435 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 ZNF839A8K0R7 811 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 SERPINF2P08697 491 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 MYL4P12829 197 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 FUT4P22083 530 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 CORO1AP31146 461 aaKnown RBP15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 PRKAA2P54646 552 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 CDKL1Q00532 357 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 GNA12Q03113 381 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 FOLH1Q04609 750 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 TLR1Q15399 786 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 CNPY1Q3B7I2 92 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 PIGGQ5H8A4 983 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 ACBD5Q5T8D3 534 aaPredicted RBP15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 PQLC1Q8N2U9 271 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 CARNMT1Q8N4J0 409 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 OR4L1Q8NH43 312 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 RP9Q8TA86 221 aaKnown RBP15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 ZFAND2BQ8WV99 257 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 LRTOMTQ8WZ04 291 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 DCUN1D1Q96GG9 259 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 LRGUKQ96M69 825 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 UROC1Q96N76 676 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 CINPQ9BW66 212 aaPredicted RBP15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 POLR3BQ9NW08 1133 aaPredicted RBP15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 ZNF232Q9UNY5 417 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 DNAJC15Q9Y5T4 150 aa15.75■□□□□ 0.11
SNRNP70-203ENST00000544278 BTN3A1O00481 513 aa15.74■□□□□ 0.11
SNRNP70-203ENST00000544278 COCHO43405 550 aa15.74■□□□□ 0.11
SNRNP70-203ENST00000544278 KATNA1O75449 491 aa15.74■□□□□ 0.11
SNRNP70-203ENST00000544278 CDK14O94921 469 aa15.74■□□□□ 0.11
SNRNP70-203ENST00000544278 INHAP05111 366 aa15.74■□□□□ 0.11
SNRNP70-203ENST00000544278 EEF1DP29692 281 aaKnown RBP15.74■□□□□ 0.11
SNRNP70-203ENST00000544278 CA5AP35218 305 aa15.74■□□□□ 0.11
SNRNP70-203ENST00000544278 MED21Q13503 144 aa15.74■□□□□ 0.11
SNRNP70-203ENST00000544278 SMYD5Q6GMV2 418 aa15.74■□□□□ 0.11
SNRNP70-203ENST00000544278 RETREG3Q86VR2 466 aa15.74■□□□□ 0.11
SNRNP70-203ENST00000544278 FBXO22Q8NEZ5 403 aa15.74■□□□□ 0.11
SNRNP70-203ENST00000544278 CATSPERZQ9NTU4 200 aa15.74■□□□□ 0.11
SNRNP70-203ENST00000544278 STK39Q9UEW8 545 aa15.74■□□□□ 0.11
SNRNP70-203ENST00000544278 MYOFQ9NZM1 2061 aa15.74■□□□□ 0.11
SNRNP70-203ENST00000544278 INSIG1O15503 277 aa15.74■□□□□ 0.11
SNRNP70-203ENST00000544278 GALTP07902 379 aa15.74■□□□□ 0.11
SNRNP70-203ENST00000544278 CKMT2P17540 419 aa15.74■□□□□ 0.11
SNRNP70-203ENST00000544278 ME2P23368 584 aa15.74■□□□□ 0.11
SNRNP70-203ENST00000544278 NDST2P52849 883 aa15.74■□□□□ 0.11
SNRNP70-203ENST00000544278 ARMC12Q5T9G4 340 aa15.74■□□□□ 0.11
SNRNP70-203ENST00000544278 RNF219Q5W0B1 726 aaPredicted RBP15.74■□□□□ 0.11
SNRNP70-203ENST00000544278 REP15Q6BDI9 236 aa15.74■□□□□ 0.11
SNRNP70-203ENST00000544278 CLDN19Q8N6F1 224 aa15.74■□□□□ 0.11
SNRNP70-203ENST00000544278 LPGAT1Q92604 370 aa15.74■□□□□ 0.11
SNRNP70-203ENST00000544278 PPWD1Q96BP3 646 aaKnown RBP15.74■□□□□ 0.11
SNRNP70-203ENST00000544278 C8orf48Q96LL4 319 aa15.74■□□□□ 0.11
SNRNP70-203ENST00000544278 PLEKHG4BQ96PX9 1271 aa15.74■□□□□ 0.11
SNRNP70-203ENST00000544278 MRPL1Q9BYD6 325 aaKnown RBP15.74■□□□□ 0.11
SNRNP70-203ENST00000544278 AURKCQ9UQB9 309 aa15.74■□□□□ 0.11
SNRNP70-203ENST00000544278 SNX13Q9Y5W8 968 aa15.74■□□□□ 0.11
SNRNP70-203ENST00000544278 CEP290O15078 2479 aa15.74■□□□□ 0.11
SNRNP70-203ENST00000544278 A0A087X1B8 175 aa15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 MRASO14807 208 aa15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 GUCA1CO95843 209 aa15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 CLCN5P51795 746 aa15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 ZNF678Q5SXM1 525 aa15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 DNAJC14Q6Y2X3 702 aaPredicted RBP15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 GRIN3AQ8TCU5 1115 aa15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 WFDC5Q8TCV5 224 aa15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 UBXN10Q96LJ8 280 aa15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 CASD1Q96PB1 797 aa15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 PRKD2Q9BZL6 878 aa15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 UBAP1Q9NZ09 502 aa15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 PCDHB9Q9Y5E1 797 aa15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 VCANP13611 3396 aa15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 CRCPO75575 148 aa15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 TIPRLO75663 272 aa15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 BAIAP3O94812 1187 aa15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 CD1DP15813 335 aa15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 CYTH1Q15438 398 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms