RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 HID1Q8IV36 788 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 TMEM192Q8IY95 271 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 HDDC3Q8N4P3 179 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 ZNF461Q8TAF7 563 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 FIG4Q92562 907 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 PROX1Q92786 737 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 UQCC2Q9BRT2 126 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 TTLL2Q9BWV7 592 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 OSBPL1AQ9BXW6 950 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 DZANK1Q9NVP4 752 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 ADPRHL2Q9NX46 363 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 ZNF232Q9UNY5 417 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 VWA7Q9Y334 891 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 CACNA1FO60840 1977 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 INSIG1O15503 277 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 SOD2P04179 222 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 CDH3P22223 829 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 ADSSP30520 456 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 TIE1P35590 1138 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 ADGRF1Q5T601 910 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 MON1BQ7L1V2 547 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 MTDHQ86UE4 582 aaKnown RBP6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 KYQ8NBH2 561 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 GPR156Q8NFN8 814 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 KLHL32Q96NJ5 620 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 TDP1Q9NUW8 608 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 USE1Q9NZ43 259 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 CCDC167Q9P0B6 97 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 WRAP73Q9P2S5 460 aaPredicted RBP6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 NR2E1Q9Y466 385 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 PCP4L1A6NKN8 68 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 MRASO14807 208 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 IRAK2O43187 625 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 ERN1O75460 977 aaKnown RBP6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 NTRK1P04629 796 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 PKMP14618 531 aaKnown RBP6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 CALB2P22676 271 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 DSC2Q02487 901 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 IL10RBQ08334 325 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 HNRNPDQ14103 355 aaKnown RBP6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 FRG1Q14331 258 aaKnown RBP6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 PRMT9Q6P2P2 845 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 TXNDC11Q6PKC3 985 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 PIWIL4Q7Z3Z4 852 aaKnown RBP6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 VN1R5Q7Z5H4 357 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 GRASPQ7Z6J2 395 aaPredicted RBP6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 HDAC7Q8WUI4 952 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 BADQ92934 168 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 HMCESQ96FZ2 354 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 PPP3R2Q96LZ3 170 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 CCT7Q99832 543 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 SLC25A23Q9BV35 468 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 SLC25A51Q9H1U9 297 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 APOBEC3GQ9HC16 384 aaKnown RBP6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 CNTN3Q9P232 1028 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 CROTQ9UKG9 612 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 LRRC14BA6NHZ5 514 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 PRAMEF1O95521 474 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 ADH5P11766 374 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 SSR2P43308 183 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 RPL14P50914 215 aaKnown RBP6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 RAD23AP54725 363 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 INAVAQ3KP66 663 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 USP39Q53GS9 565 aaKnown RBP6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 TAPT1Q6NXT6 567 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 CLEC20AQ6ZU45 233 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 CHSY3Q70JA7 882 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 PLD3Q8IV08 490 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 DAW1Q8N136 415 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 CDYL2Q8N8U2 506 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 KCTD4Q8WVF5 259 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 OLFM3Q96PB7 478 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 SLC38A3Q99624 504 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 MRPL57Q9BQC6 102 aaKnown RBP6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 LPIN3Q9BQK8 851 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 RERGLQ9H628 205 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 IL23AQ9NPF7 189 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 ANXA6P08133 673 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 ITGA2BP08514 1039 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 PF4V1P10720 104 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 GPR17Q13304 367 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 NDUFA9Q16795 377 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 FAM98BQ52LJ0 330 aaKnown RBP6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 CERCAMQ5T4B2 595 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 INTS11Q5TA45 600 aaKnown RBP6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 NAIF1Q69YI7 327 aaPredicted RBP6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 IYDQ6PHW0 289 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 GPRIN3Q6ZVF9 776 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 SERINC5Q86VE9 423 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 SIAH1Q8IUQ4 282 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 MICU2Q8IYU8 434 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 CCDC185Q8N715 623 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 PLD5Q8N7P1 536 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 RIN3Q8TB24 985 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 AIF1LQ9BQI0 150 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 BCAS3Q9H6U6 928 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 GKN1Q9NS71 199 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 KLC4Q9NSK0 619 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 DMAC2Q9NW81 257 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 IL1RAPL1Q9NZN1 696 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms