RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 ELMOD1Q8N336 334 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 SCAMP5Q8TAC9 235 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 SELENOMQ8WWX9 145 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 LINGO1Q96FE5 620 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 BTN2A3PQ96KV6 586 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 SLC39A3Q9BRY0 314 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 KIFC1Q9BW19 673 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 SUCOQ9UBS9 1254 aaKnown RBP8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 AQP12BA6NM10 295 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 A8MT66 165 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 FAM20BO75063 409 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 CNOT3O75175 753 aaKnown RBP8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 PKMP14618 531 aaKnown RBP8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 DGKAP23743 735 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 YBEYP58557 167 aaPredicted RBP8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 RPL38P63173 70 aaKnown RBP8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 GALNT2Q10471 571 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 ARMC12Q5T9G4 340 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 USP50Q70EL3 339 aaPredicted RBP8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 TMEM126BQ8IUX1 230 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 AQP12AQ8IXF9 295 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 OR2T12Q8NG77 320 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 SPPL2AQ8TCT8 520 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 HAPLN3Q96S86 360 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 ZNHIT2Q9UHR6 403 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 ADAMTS5Q9UNA0 930 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 NDST3O95803 873 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 PGK1P00558 417 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 HSMCR30P0CW71 290 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 EPB42P16452 691 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 HOXD10P28358 340 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 MZF1P28698 734 aaPredicted RBP8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 PBX3P40426 434 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 NIPAL4Q0D2K0 466 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 MERTKQ12866 999 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 MAP2K5Q13163 448 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 AP5B1Q2VPB7 878 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 ERI1Q8IV48 349 aaKnown RBP8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 PCSK9Q8NBP7 692 aaKnown RBP8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 ARRDC4Q8NCT1 418 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 OR9I1Q8NGQ6 314 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 HM13Q8TCT9 377 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 TOP1MTQ969P6 601 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 MTFMTQ96DP5 389 aaKnown RBP8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 TEX12Q9BXU0 123 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 OXCT2Q9BYC2 517 aaPredicted RBP8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 OSBPL6Q9BZF3 934 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 OSBPL2Q9H1P3 480 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 MUC13Q9H3R2 512 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 ASB8Q9H765 288 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 ARL15Q9NXU5 204 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 SLC2A6Q9UGQ3 507 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 SF3B1O75533 1304 aaKnown RBP eCLIP8.18□□□□□ -1.19e-7■■■■■ 57.4
PRKAB1-207ENST00000542698 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 GNG14A0A1W2PPG7 69 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 G3V2T6 193 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 PDLIM1O00151 329 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 WDR47O94967 919 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 ALDH1A1P00352 501 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 CKMP06732 381 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 OR4Q2P0C623 313 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 DNAJB1P25685 340 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 POU1F1P28069 291 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 MAGEA6P43360 314 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 PIK3CGP48736 1102 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 CDH15P55291 814 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 KRR1Q13601 381 aaKnown RBP8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 KRT33BQ14525 404 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 TLR1Q15399 786 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 KBTBD2Q8IY47 623 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 TMEM130Q8N3G9 435 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 GPR152Q8TDT2 470 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 UTP15Q8TED0 518 aaKnown RBP8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 PSMG2Q969U7 264 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 UROC1Q96N76 676 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 GPR21Q99679 349 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 BBS2Q9BXC9 721 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 ROGDIQ9GZN7 287 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 LMCD1Q9NZU5 365 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 SH3BP4Q9P0V3 963 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 CACNG4Q9UBN1 327 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 ADGRE2Q9UHX3 823 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 MYH9P35579 1960 aaKnown RBP8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 TCRBV5S1A1TA0A578 114 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 FAM72CH0Y354 149 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 H3BMM5 538 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 TP73O15350 636 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 IRAK2O43187 625 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 TLR5O60602 858 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 SIX3O95343 332 aaPredicted RBP8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 GOT2P00505 430 aaKnown RBP8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 ANXA5P08758 320 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 GSSP48637 474 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 LSM3P62310 102 aaKnown RBP8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 CEACAM7Q14002 265 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 CCDC85BQ15834 202 aaPredicted RBP8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 TAZQ16635 292 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 PERM1Q5SV97 790 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 FAM72AQ5TYM5 149 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 OR52E8Q6IFG1 317 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms