RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.35□□□□□ -1.71
SNHG1-219ENST00000542112 SMOXQ9NWM0 555 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 HPF1Q9NWY4 346 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 CEP72Q9P209 647 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 TXNDC16Q9P2K2 825 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 LRWD1Q9UFC0 647 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 FETUBQ9UGM5 382 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 CYB5R1Q9UHQ9 305 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 SLC24A2Q9UI40 661 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 RAB23Q9ULC3 237 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 PLA2G4CQ9UP65 541 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 GDAQ9Y2T3 454 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 KCNK7Q9Y2U2 307 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 RAD54BQ9Y620 910 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 A3GALT2U3KPV4 340 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 EMSYQ7Z589 1322 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 MED1Q15648 1581 aaPredicted RBP4.35□□□□□ -1.71
SNHG1-219ENST00000542112 LRRC37A3O60309 1634 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 LTBP4Q8N2S1 1624 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 ADAMTS7Q9UKP4 1686 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 CAPN8A6NHC0 703 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 C12orf71A8MTZ7 269 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 KLRF2D3W0D1 207 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 H0Y626 953 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 RTCAO00442 366 aaKnown RBP4.34□□□□□ -1.71
SNHG1-219ENST00000542112 TRAF5O00463 557 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 AIM2O14862 343 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 TM9SF1O15321 606 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 HS6ST1O60243 411 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 JAK2O60674 1132 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 ZNF623O75123 536 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 IDH1O75874 414 aaKnown RBP4.34□□□□□ -1.71
SNHG1-219ENST00000542112 RBBP9O75884 186 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 KCNH1O95259 989 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 MOCS3O95396 460 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 PRAMEF1O95521 474 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 GUCA1CO95843 209 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 PLGP00747 810 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-219ENST00000542112 HEXBP07686 556 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 ZBTB48P10074 688 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-219ENST00000542112 SELLP14151 372 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 FGFR2P21802 821 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 POU1F1P28069 291 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 EEF1DP29692 281 aaKnown RBP4.34□□□□□ -1.71
SNHG1-219ENST00000542112 L1CAMP32004 1257 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 CHRNA3P32297 505 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 ADD2P35612 726 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 ETV5P41161 510 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 BTDP43251 543 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 GSTM5P46439 218 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 RPS5P46782 204 aaKnown RBP4.34□□□□□ -1.71
SNHG1-219ENST00000542112 MEOX2P50222 304 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 SERPINH1P50454 418 aaKnown RBP4.34□□□□□ -1.71
SNHG1-219ENST00000542112 SCNN1GP51170 649 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 NKX2-5P52952 324 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-219ENST00000542112 PPP5CP53041 499 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 SUCLG1P53597 346 aaKnown RBP4.34□□□□□ -1.71
SNHG1-219ENST00000542112 HSPA2P54652 639 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 RAB25P57735 213 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 SPCS3P61009 180 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 CCNA1P78396 465 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 KCNJ10P78508 379 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 IFI35P80217 286 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-219ENST00000542112 POU4F1Q01851 419 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 TEKQ02763 1124 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 KLRC3Q07444 240 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 PPARAQ07869 468 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 TNK2Q07912 1038 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 MAP4K2Q12851 820 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 DUSP4Q13115 394 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 ADAM15Q13444 863 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 SLC12A1Q13621 1099 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 SLC29A2Q14542 456 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 MXD4Q14582 209 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-219ENST00000542112 PPP2R5DQ14738 602 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 MAPKAPK3Q16644 382 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 GRAMD1BQ3KR37 738 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 AARDQ4LEZ3 155 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 DALRD3Q5D0E6 543 aaKnown RBP4.34□□□□□ -1.71
SNHG1-219ENST00000542112 ZMAT1Q5H9K5 638 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 TOR2AQ5JU69 321 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 KIAA1755Q5JYT7 1200 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.34□□□□□ -1.71
SNHG1-219ENST00000542112 C6orf52Q5T4I8 152 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 ALKBH5Q6P6C2 394 aaKnown RBP4.34□□□□□ -1.71
SNHG1-219ENST00000542112 C5orf46Q6UWT4 87 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 LDHAL6AQ6ZMR3 332 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 ZNF782Q6ZMW2 699 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-219ENST00000542112 TPGS1Q6ZTW0 290 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 RRM2BQ7LG56 351 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 KRT26Q7Z3Y9 468 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 RNF180Q86T96 592 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 MTDHQ86UE4 582 aaKnown RBP4.34□□□□□ -1.71
SNHG1-219ENST00000542112 NLRX1Q86UT6 975 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 KBTBD6Q86V97 674 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 ADGRG3Q86Y34 549 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 FOXP4Q8IVH2 680 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-219ENST00000542112 ARHGEF19Q8IW93 802 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 CHERPQ8IWX8 916 aaKnown RBP4.34□□□□□ -1.71
SNHG1-219ENST00000542112 KLHL7Q8IXQ5 586 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms