RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 ZNF599Q96NL3 588 aa7.75□□□□□ -1.17
AC005840.3-201ENST00000541888 NUDCD1Q96RS6 583 aa7.75□□□□□ -1.17
AC005840.3-201ENST00000541888 UNKQ9C0B0 810 aaKnown RBP7.75□□□□□ -1.17
AC005840.3-201ENST00000541888 ABCG8Q9H221 673 aa7.75□□□□□ -1.17
AC005840.3-201ENST00000541888 FAM96AQ9H5X1 160 aa7.75□□□□□ -1.17
AC005840.3-201ENST00000541888 EURLQ9NYK6 297 aa7.75□□□□□ -1.17
AC005840.3-201ENST00000541888 GDE1Q9NZC3 331 aa7.75□□□□□ -1.17
AC005840.3-201ENST00000541888 MARCH4Q9P2E8 410 aaPredicted RBP7.75□□□□□ -1.17
AC005840.3-201ENST00000541888 ERVW-1Q9UQF0 538 aa7.75□□□□□ -1.17
AC005840.3-201ENST00000541888 LOC285095A0A1B0GVY8 99 aa7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 KLHL33A6NCF5 533 aa7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 ERI2A8K979 691 aaKnown RBP7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 LDB2O43679 373 aa7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 LILRB5O75023 590 aa7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 DNAJC6O75061 913 aa7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 POLBP06746 335 aa7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 CTSLP07711 333 aa7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 GSTA1P08263 222 aa7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 ABHD2P08910 425 aa7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 POU2F2P09086 479 aa7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 PSMC3P17980 439 aa7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 POLR2EP19388 210 aaKnown RBP7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 MSH2P43246 934 aa7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 RGS19P49795 217 aa7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 EIF3BP55884 814 aaKnown RBP7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 RUNX3Q13761 415 aa7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 ZNF460Q14592 562 aa7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 STAT4Q14765 748 aa7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 RNF187Q5TA31 235 aaPredicted RBP7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 LINC00523Q86TU6 105 aa7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 TMEM135Q86UB9 458 aa7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 TSPAN33Q86UF1 283 aa7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 KCNMB4Q86W47 210 aa7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 MFSD6LQ8IWD5 586 aa7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 ETFBKMTQ8IXQ9 262 aa7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 KLHDC8BQ8IXV7 354 aa7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 RGL4Q8IZJ4 473 aa7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 BBS5Q8N3I7 341 aa7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 PPHLN1Q8NEY8 458 aaKnown RBP7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 OR2AP1Q8NGE2 309 aa7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 OR13J1Q8NGT2 312 aa7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 NUDT8Q8WV74 236 aa7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 TLCD1Q96CP7 247 aa7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 CCT8L2Q96SF2 557 aa7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 CDX2Q99626 313 aaPredicted RBP7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 IL22Q9GZX6 179 aa7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 KCNK9Q9NPC2 374 aa7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 CACNA2D2Q9NY47 1150 aa7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 MOCS1Q9NZB8 636 aa7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 SLC25A13Q9UJS0 675 aa7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 SOX13Q9UN79 622 aa7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 ITM2BQ9Y287 266 aa7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 TCAF1Q9Y4C2 921 aa7.74□□□□□ -1.17
AC005840.3-201ENST00000541888 TBC1D3BA6NDS4 549 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 NPIPB15A6NHN6 443 aaPredicted RBP7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 FAM159BA6NKW6 160 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 TRIM49D1C9J1S8 452 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 SLC9A3R1O14745 358 aaPredicted RBP7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 LIN7AO14910 233 aaPredicted RBP7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 CDH16O75309 829 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 NFATC1O95644 943 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 INHBAP08476 426 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 HOXB8P17481 243 aaPredicted RBP7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 STX2P32856 288 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 CA5AP35218 305 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 EPHB1P54762 984 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 FCHO2Q0JRZ9 810 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 SEMA3AQ14563 771 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 FNDC3BQ53EP0 1204 aaKnown RBP7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 SPDYCQ5MJ68 293 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 EGFLAMQ63HQ2 1017 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 STEAP4Q687X5 459 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 ZNF470Q6ECI4 717 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 ALG1LQ6GMV1 187 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 PKN3Q6P5Z2 889 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 ZNF783Q6ZMS7 281 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 GLT6D1Q7Z4J2 308 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 CMC1Q7Z7K0 106 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 AHI1Q8N157 1196 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 OR4K2Q8NGD2 314 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 OR2A12Q8NGT7 310 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 OR6P1Q8NGX9 317 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 GDAP1Q8TB36 358 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 SLC44A1Q8WWI5 657 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 EZH1Q92800 747 aaPredicted RBP7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 FATE1Q969F0 183 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 HDAC10Q969S8 669 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 FEM1CQ96JP0 617 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 TBATAQ96M53 351 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 RIPOR3Q96MK2 946 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 CYTH2Q99418 400 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 NDNQ99608 321 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 SLC6A17Q9H1V8 727 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 BRD9Q9H8M2 597 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 FBXO6Q9NRD1 293 aaPredicted RBP7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 HEBP1Q9NRV9 189 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 PSMC3IPQ9P2W1 217 aaPredicted RBP7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 DEC1Q9P2X7 70 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 CD207Q9UJ71 328 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms