RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 GALPQ9UBC7 116 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 TOR1BO14657 336 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 BMP10O95393 424 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 ITGB1P05556 798 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 GFAPP14136 432 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 FASP25445 335 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 PSMA4P25789 261 aaKnown RBP10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 GGT5P36269 586 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 CCT8P50990 548 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 TIAL1Q01085 375 aaKnown RBP eCLIP10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 TRAP1Q12931 704 aaKnown RBP10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 SELPLGQ14242 412 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 TGFBIQ15582 683 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 SLC36A3Q495N2 470 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 TIGD5Q53EQ6 642 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 FAM45BPQ6NSW5 357 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 ERO1BQ86YB8 467 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 FAM86B1Q8N7N1 296 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 FAM45AQ8TCE6 357 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 RNF145Q96MT1 663 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 MUS81Q96NY9 551 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 SLC9A7Q96T83 725 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 SLC30A3Q99726 388 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 NOL6Q9H6R4 1146 aaKnown RBP10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 EML4Q9HC35 981 aaKnown RBP10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 ZFYVE28Q9HCC9 887 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 CNGB3Q9NQW8 809 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 TBC1D13Q9NVG8 400 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 NSMCE4AQ9NXX6 385 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 SH3BP1Q9Y3L3 701 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 MTSS1O43312 755 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 XYLBO75191 536 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 RSL1D1O76021 490 aaKnown RBP10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 ANXA9O76027 345 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 FAM163BP0C2L3 166 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 IMPDH1P20839 514 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 ARL1P40616 181 aaPredicted RBP10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 BMXP51813 675 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 OR4D2P58180 307 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 NFYCQ13952 458 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 MAPRE2Q15555 327 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 IMPG1Q17R60 797 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 DCLRE1AQ6PJP8 1040 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 Q6ZNX1 250 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 LIMS2Q7Z4I7 341 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 CAMK1DQ8IU85 385 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 KIAA2013Q8IYS2 634 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 SLC15A4Q8N697 577 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 IL12RB2Q99665 862 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 NMUR1Q9HB89 426 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 PLGRKTQ9HBL7 147 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 NDUFAF1Q9Y375 327 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 GMEB1Q9Y692 573 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 ZNF236Q9UL36 1845 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 UBA6A0AVT1 1052 aaPredicted RBP10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 FAM155AB1AL88 458 aaPredicted RBP10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 MATN3O15232 486 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 TBX18O95935 607 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 S1PR4O95977 384 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 HMBSP08397 361 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 HSPA8P11142 646 aaKnown RBP10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 IMPDH2P12268 514 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 MTHFD2P13995 350 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 MYF6P23409 242 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 ALDH4A1P30038 563 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 CDKN1CP49918 316 aaPredicted RBP10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 HK2P52789 917 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 MTPNP58546 118 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 LIPEQ05469 1076 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 ALFQ53S48 1182 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 ARTNQ5T4W7 220 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 KIAA0930Q6ICG6 404 aaPredicted RBP10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 SLC2A7Q6PXP3 512 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 PHYKPLQ8IUZ5 450 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 ABI1Q8IZP0 508 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 TOP6BLQ8N6T0 577 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 PSMG2Q969U7 264 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 HMCESQ96FZ2 354 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 PPM1MQ96MI6 270 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 VAT1Q99536 393 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 FAIMQ9NVQ4 179 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 OSER1Q9NX31 292 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 CIDEBQ9UHD4 219 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 C1orf232A0A0U1RR37 186 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 KCNE1P15382 129 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 EEF1DP29692 281 aaKnown RBP10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 PNPLA4P41247 253 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 GPR15P49685 360 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 KPNA1P52294 538 aaPredicted RBP10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 FPGSQ05932 587 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 BFSP2Q13515 415 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 ACAP2Q15057 778 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 ATP6AP1Q15904 470 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 ADRM1Q16186 407 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 C18orf21Q32NC0 220 aaPredicted RBP10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 GALNT18Q6P9A2 607 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 C16orf87Q6PH81 154 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 MIER2Q8N344 545 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 OR10T2Q8NGX3 314 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 HM13Q8TCT9 377 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms